A cold-active esterase of Streptomyces coelicolor A3(2): from genome sequence to enzyme activity

2007 ◽  
Vol 34 (8) ◽  
pp. 525-531 ◽  
Author(s):  
Sameh H. Soror ◽  
V. Verma ◽  
Ren Rao ◽  
Shafaq Rasool ◽  
S. Koul ◽  
...  
Virus Genes ◽  
2016 ◽  
Vol 52 (3) ◽  
pp. 432-435 ◽  
Author(s):  
Kunhao Qin ◽  
Benxu Cheng ◽  
Shengting Zhang ◽  
Nan Wang ◽  
Yuan Fang ◽  
...  

2020 ◽  
Vol 70 (1) ◽  
Author(s):  
Elisa Steiner ◽  
Rosa Margesin

Abstract Purpose To evaluate the production of a cold-active CMCase (endoglucanase) by Bacillus mycoides AR20-61 isolated from Alpine forest soil and to characterize the crude enzyme. Methods After studying the effect of cultivation parameters (medium composition, temperature, NaCl concentration, pH) on bacterial growth and enzyme production, the crude enzyme was characterized with regard to the effect of pH, temperature, and inhibitors on enzyme activity and stability. Result Optimum growth and enzyme production occurred at 20–25 °C, pH 7, and 1–1.5% (w/v) CMC. Despite high biomass production over the whole growth temperature range (10–35 °C), enzyme production was low at 10 and 35 °C. CMC concentration had a minor effect on growth, independent of the growth temperature, but a significant effect on CMCase production at temperatures ≥ 20 °C. The crude enzyme was active over a broad temperature range (0–60 °C); the apparent optimum temperature for activity was at 40–50 °C. The cultivation temperature influenced the effect of temperature on enzyme activity and stability. A significantly higher thermosensitivity of the enzyme produced at a cultivation temperature of 10 °C compared to that produced at 25 °C was noted at 50 and 65 °C. The enzyme was highly active over a pH range of 4–6 and showed optimum activity at pH 5. No activity was lost after 60 min of incubation at 30 °C and pH 4–9. The CMCase was resistant against a number of monovalent and divalent metal ions, metal-chelating agents, and phenol. Conclusion The CMCase produced by the studied strain is characterized by high activities in the low temperature range (down to 0 °C) and acidic pH range, high stability over a broad pH range, and high resistance against a number of effectors. Our results also demonstrate the different, independent roles of temperature in bacterial growth, enzyme production, nutrient requirements during enzyme production, and enzyme characteristics regarding thermosensitivity, which has not yet been described for cellulases.


2006 ◽  
Vol 188 (14) ◽  
pp. 5113-5123 ◽  
Author(s):  
Miroslav Petříček ◽  
Kateřina Petříčková ◽  
Libor Havlíček ◽  
Jürgen Felsberg

ABSTRACT We report the results of cloning genes for two key biosynthetic enzymes of different 5-aminolevulinic acid (ALA) biosynthetic routes from Streptomyces. The genes encode the glutamyl-tRNAGlu reductase (GluTR) of the C5 pathway and the ALA synthase (ALAS) of the Shemin pathway. While Streptomyces coelicolor A3(2) synthesizes ALA via the C5 route, both pathways are operational in Streptomyces nodosus subsp. asukaensis, a producer of asukamycin. In this strain, the C5 route produces ALA for tetrapyrrole biosynthesis; the ALA formed by the Shemin pathway serves as a precursor of the 2-amino-3-hydroxycyclopent-2-enone moiety (C5N unit), an antibiotic component. The growth of S. nodosus and S. coelicolor strains deficient in the GluTR genes (gtr) is strictly dependent on ALA or heme supplementation, whereas the defect in the ALAS-encoding gene (hemA-asuA) abolishes the asukamycin production in S. nodosus. The recombinant hemA-asuA gene was expressed in Escherichia coli and in Streptomyces, and the encoded enzyme activity was demonstrated both in vivo and in vitro. The hemA-asuA gene is situated within a putative cluster of asukamycin biosynthetic genes. This is the first report about the cloning of genes for two different ALA biosynthetic routes from a single bacterium.


2001 ◽  
Vol 82 (11) ◽  
pp. 2821-2825 ◽  
Author(s):  
Y. Li ◽  
Z. Zádori ◽  
H. Bando ◽  
R. Dubuc ◽  
G. Fédière ◽  
...  

Bombyx mori densovirus (BmDNV-1), on the basis of the previously reported genome sequence, constitutes by itself a separate genus (Iteravirus) within the Densovirinae subfamily of parvoviruses. Inconsistencies in the genome organization, however, necessitated its reassessment. The genome sequence of new clones was determined and resulted in a completely different genome organization. The corrected sequence also contained conserved sequence motifs found in other parvoviruses. Some amino acids in the highly conserved domain in the unique region of VP1 were shared by critical amino acids in the catalytic site and Ca2+-binding loop of secreted phospholipase A2, such as from snake and bee venoms. Expression of this domain and determination of enzyme activity demonstrated that capsids have a phospholipase A2 activity thus far unknown to occur in viruses. This viral phospholipase A2, which is required shortly after entry into the cell, showed a substrate preference for phosphatidylethanolamine and phosphatidylcholine over phosphatidylinositol.


2017 ◽  
Vol 5 (15) ◽  
Author(s):  
Purnima Singh ◽  
Neelam Kapse ◽  
Utpal Roy ◽  
Shiv Mohan Singh ◽  
P. K. Dhakephalkar

ABSTRACT Nesterenkonia sp. strain PF2B19, a psychrophilic bacterium, was isolated from 44,800-year-old permafrost. The draft genome sequence of this strain revealed the presence of genes involved in the production of cold active enzymes, carotenoid biosynthesis, fatty acid biosynthesis, and resistance to heavy metals. These results show the immense potential of the strain.


Viruses ◽  
2021 ◽  
Vol 13 (8) ◽  
pp. 1616
Author(s):  
Aël Hardy ◽  
Vikas Sharma ◽  
Larissa Kever ◽  
Julia Frunzke

The authors wish to make the following corrections to this paper [...]


PLoS ONE ◽  
2012 ◽  
Vol 7 (3) ◽  
pp. e32041 ◽  
Author(s):  
Guillaume Brault ◽  
François Shareck ◽  
Yves Hurtubise ◽  
François Lépine ◽  
Nicolas Doucet

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