Deciphering the function of non-coding RNAs in prostate cancer

2016 ◽  
Vol 35 (2) ◽  
pp. 235-262 ◽  
Author(s):  
João Ramalho-Carvalho ◽  
Bastian Fromm ◽  
Rui Henrique ◽  
Carmen Jerónimo
2019 ◽  
Vol 464 ◽  
pp. 37-55 ◽  
Author(s):  
Yun-Hua Xu ◽  
Jun-Li Deng ◽  
Guo Wang ◽  
Yuan-Shan Zhu

2011 ◽  
Author(s):  
Matthew K. Iyer ◽  
John R. Prensner ◽  
Oscar A. Balbin ◽  
Saravana M. Dhanasekaran ◽  
Qi Cao ◽  
...  

Oncotarget ◽  
2018 ◽  
Vol 9 (29) ◽  
pp. 20872-20890 ◽  
Author(s):  
Cristian Arriaga-Canon ◽  
Inti Alberto De La Rosa-Velázquez ◽  
Rodrigo González-Barrios ◽  
Rogelio Montiel-Manríquez ◽  
Diego Oliva-Rico ◽  
...  

2017 ◽  
Vol 7 ◽  
Author(s):  
Alessia Cimadamore ◽  
Silvia Gasparrini ◽  
Roberta Mazzucchelli ◽  
Andrea Doria ◽  
Liang Cheng ◽  
...  

PLoS ONE ◽  
2015 ◽  
Vol 10 (5) ◽  
pp. e0122143 ◽  
Author(s):  
Pushpinder Bawa ◽  
Sajna Zackaria ◽  
Mohit Verma ◽  
Saurabh Gupta ◽  
R Srivatsan ◽  
...  

Author(s):  
Xavier Filella ◽  
Laura Foj

AbstractmicroRNAs (miRNAs) are small non-coding RNAs that control gene expression posttranscriptionally and are part of the giant non codifying genoma. Cumulating data suggest that miRNAs are promising potential biomarkers for many diseases, including cancer. Prostate cancer (PCa) detection is currently based in the serum prostate-specific antigen biomarker and digital rectal examination. However, these methods are limited by a low predictive value and the adverse consequences associated with overdiagnosis and overtreatment. New biomarkers that could be used for PCa detection and prognosis are still needed. Recent studies have demonstrated that aberrant expressions of microRNAs are associated with the underlying mechanisms of PCa. This review attempts to extensively summarize the current knowledge of miRNA expression patterns, as well as their targets and involvement in PCa pathogenesis. We focused our review in the value of circulating and urine miRNAs as biomarkers in PCa patients, highlighting the existing discrepancies between different studies, probably associated with the important methodological issues related to their quantitation and normalization. The majority of studies have been performed in serum or plasma, but urine obtained after prostate massage appears as a new way to explore the usefulness of miRNAs. Large screening studies to select a miRNA profile have been completed, but bioinformatics tools appear as a new approach to select miRNAs that are relevant in PCa development. Promising preliminary results were published concerning miR-141, miR-375 and miR-21, but larger and prospective studies using standardized methodology are necessary to define the value of miRNAs in the detection and prognosis of PCa.


2016 ◽  
Vol 6 (1) ◽  
Author(s):  
Alireza Ahadi ◽  
Samuel Brennan ◽  
Paul J. Kennedy ◽  
Gyorgy Hutvagner ◽  
Nham Tran

2018 ◽  
Author(s):  
Jesse R. Raab ◽  
Keriayn N. Smith ◽  
Camarie C. Spear ◽  
Carl J. Manner ◽  
J. Mauro Calabrese ◽  
...  

AbstractSCHLAP1 is a long-noncoding RNA that is prognostic for progression to metastatic prostate cancer and promotes an invasive phenotype. SCHLAP1 is reported to function by depleting the core SWI/SNF subunit, SMARCB1, from the genome. SWI/SNF is a large, multi-subunit, chromatin remodeling complex that can be combinatorially assembled to yield hundreds to thousands of distinct complexes. Here, we investigated the hypothesis that SCHLAP1 affects only specific forms of SWI/SNF and that the remaining SWI/SNF complexes were important for the increased invasion in SCHLAP1 expressing prostate cells. Using several assays we found that SWI/SNF is not depleted from the genome by SCHLAP1 expression. We find that SCHLAP1 induces changes to chromatin openness but is not sufficient to drive changes in histone modifications. Additionally, we show that SWI/SNF binds many coding and non-coding RNAs. Together these results suggest that SCHLAP1 has roles independent of canonical SWI/SNF and that SWI/SNF broadly interacts with RNA.


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