Sucrose density-gradient analysis of the alkaline degradation of tobacco mosaic virus

1969 ◽  
Vol 45 (2) ◽  
pp. 439-441 ◽  
Author(s):  
Richard N. Perham
Keyword(s):  
Tobacco Mosaic Virus ◽  
Mosaic Virus ◽  
Density Gradient ◽  
Gradient Analysis ◽  
Sucrose Density Gradient ◽  
Alkaline Degradation

scholarly journals Ribonucleic Acid Biosynthesis in Human Leukocytes

Blood ◽  
1966 ◽  
Vol 28 (2) ◽  
pp. 188-200 ◽  
Author(s):  
MARTIN J. CLINE
Keyword(s):  
Density Gradient ◽  
Ribonucleic Acid ◽  
Turnover Rate ◽  
Rna Synthesis ◽  
Gradient Analysis ◽  
Sucrose Density Gradient ◽  
Acid Biosynthesis ◽  
Total Load ◽  
Human Leukocytes ◽  
Particle Ingestion

Abstract Phagocytosis has profound effects on several aspects of the RNA metabolism of human leukocytes. The major changes induced by particle ingestion appear to be (1) an increased uptake of pyrimidine precursors from the suspending medium, (2) a contraction in the size of the nucleotide pool, (3) an accelerated rate of destruction of preexisting RNA, and (4) an increased rate of RNA synthesis. Sucrose density gradient analysis of the newly synthesized RNA suggests that several classes of RNA are involved in this process. The increased turnover rate of the nucleotide pool and of the cellular RNA of the leukocyte is proportional, within limits, to the total load of ingested particles.

ANALYSIS OF RIBOSOMES AND POLYSOMES DERIVED FROM RABBIT MAMMARY GLANDS DURING PREGNANCY AND LACTATION

1971 ◽  
Vol 49 (4) ◽  
pp. 667-NP ◽  
Author(s):  
I. D. HERRIMAN ◽  
G. D. BAIRD ◽  
JUDY M. BRUCE
Keyword(s):  
Electron Microscopy ◽  
Density Gradient ◽  
Gradient Analysis ◽  
Late Pregnancy ◽  
Sucrose Density Gradient ◽  
Mammary Glands ◽  
Pregnancy And Lactation

SUMMARY Whole-ribosome and polysome-enriched fractions were prepared from the mammary glands of rabbits during late pregnancy and lactation. The composition of the fractions was determined by sucrose density gradient analysis and electron microscopy. The range of size of polysomal aggregates was similar in the late-pregnant and lactating gland, with aggregates containing five to nine ribosomal units predominating. However, the amount of polysomes relative to monosomes was invariably found to increase after parturition. The greater portion of this increase was accounted for by the increased abundance of aggregates containing five to nine units.

Study of tobacco mosaic virus in vitro disassembly by sucrose density gradient centrifugation and agarose gel electrophoresis

1984 ◽  
Vol 62 (3) ◽  
pp. 457-462 ◽  
Author(s):  
Richard Hogue ◽  
Alain Asselin
Keyword(s):  
Tobacco Mosaic Virus ◽  
Mosaic Virus ◽  
Density Gradient ◽  
Gel Electrophoresis ◽  
Density Gradient Centrifugation ◽  
Gradient Centrifugation ◽  
Agarose Gel ◽  
Agarose Gel Electrophoresis ◽  
Sucrose Density Gradient Centrifugation

In vitro disassembly of tobacco mosaic virus (TMV) strains U1, U2, U4, U6, and U7 with alkali and urea was studied by sucrose or sucrose–dimethylsulfoxide (DMSO) density gradient centrifugation and by agarose gel electrophoresis. All strains gave similar decapsidation patterns with both agents when partially stripped virus particles (PSVs) were analyzed by sedimentation and electrophoresis. However, U6 was more sensitive to decapsidation than the other strains and U2 exhibited resistance to decapsidation. Agarose gel electrophoresis of TMV decapsidation products allowed the detection of several classes of PSVs in addition to aggregation products involving PSVs and monomer particles. Agarose gel electrophoresis is thus very rapid and useful for analysis of TMV disassembly products especially when aggregation phenomena and kinetic studies with numerous samples are considered.

scholarly journals Some Properties of Rose Mosaic Virus from South Australia

1970 ◽  
Vol 23 (5) ◽  
pp. 1197 ◽  
Author(s):  
AA Basit ◽  
RIB Francki
Keyword(s):  
North America ◽  
Physical Properties ◽  
Mosaic Virus ◽  
Density Gradient ◽  
Density Gradient Centrifugation ◽  
Gradient Centrifugation ◽  
South Australia ◽  
Sucrose Density Gradient ◽  
Differential Centrifugation ◽  
Sucrose Density Gradient Centrifugation

Isolates of rose mosaic virus (RMV) from South Australia were purified by differential centrifugation of cucumber extracts clarified by emulsification with ether, followed by sucrose density-gradient centrifugation. The virus was shown to be serologically similar to and to have many physical properties in common with RMV from North America. However, the Australian isolates studied appear to hlwe narrower host ranges.

scholarly journals Preparation of ribosome-free membranes from rat liver microsomes by means of lithium chloride

1969 ◽  
Vol 115 (5) ◽  
pp. 1063-1069 ◽  
Author(s):  
T. Scott-Burden ◽  
A. O. Hawtrey
Keyword(s):  
Density Gradient ◽  
Rat Liver ◽  
Lithium Chloride ◽  
Ribosomal Rna ◽  
Gradient Analysis ◽  
Extraction Procedure ◽  
Liver Microsomes ◽  
Sucrose Density Gradient ◽  
Rat Liver Microsomes ◽  
Phenol Extraction

1. Treatment of washed rat liver microsomes in a medium containing 0·12m-sucrose, 12·5mm-potassium chloride, 2·5mm-magnesium chloride and 25mm-tris–hydrochloric acid buffer, pH7·6, with 2m-lithium chloride at 5° for 16hr. leads to the formation of membranes free of ribosomes and ribosomal subunits. 2. Confirmation of the absence of ribosomes from lithium chloride-prepared membranes was obtained by treatment of the membranes with sodium deoxycholate, followed by sucrose-density-gradient centrifugation, which showed the complete absence of ribosomes. 3. Treatment of membranes with phenol, followed by sucrose-density-gradient analysis of the isolated RNA, showed the presence of a small amount of 4s material. Repetition of the phenol extraction procedure in the presence of liver cell sap as a ribonuclease inhibitor again showed the presence of only 4s material. The 4s RNA was shown to be transfer RNA by the fact that it had the same capacity for accepting 14C-labelled amino acids as isolated transfer RNA from rat liver pH5 enzyme. 4. Analysis showed that microsomes and membranes possessed similar glucose 6-phosphatase, NADH–2,6-dichlorophenol-indophenol reductase, NADH–neo-tetrazolium reductase, NADH–cytochrome c reductase and ribonuclease activities. 5. 3H-labelled ribosomal RNA binds to membranes. However, isolation of the bound RNA by the phenol extraction procedure, followed by sucrose-density-gradient analysis, shows the RNA to be degraded to 7s material. Very little breakdown of 3H-labelled ribosomal RNA bound to membranes occurs if the binding and isolation are carried out in the presence of liver cell sap.

Polyacrylamide–agarose gel electrophoretic analysis of tobacco mosaic virus disassembly intermediates

1984 ◽  
Vol 62 (11) ◽  
pp. 2336-2339 ◽  
Author(s):  
Richard Hogue ◽  
Alain Asselin
Keyword(s):  
Tobacco Mosaic Virus ◽  
Mosaic Virus ◽  
Gel Electrophoresis ◽  
Electrophoretic Analysis ◽  
Sucrose Density Gradient ◽  
Plant Viruses ◽  
Buffer System ◽  
Agarose Gel ◽  
Agarose Gel Electrophoresis

The intermediates of disassembly of the U1, U4, U6, and U7 strains of tobacco mosaic virus (TMV) induced by alkali and urea were directly analysed by electrophoresis in composite polyacrylamide (2.0 to 2.5% (w/v)) – agarose (0.5% (w/v)) gels, using a discontinuous buffer system with Tris, borate, EDTA, and sodium chloride (pH 8.3). The results show no difference between the disassembly patterns of the four strains. In the case of alkaline stripping, two new major partially stripped virus (PSV) particles (PSV 5a and PSV 5c) and several minor intermediates were characterized. The overall results indicate that polyacrylamide–agarose gel electrophoresis is superior to agarose gel electrophoresis and to sucrose density gradient ccntrifugation for the analytical separation of PSVs. Polyacrylamide–agarose gel electrophoresis is thus a rather simple, rapid, and efficient method of studying in vitro disassembly of plant viruses.

Purine ribonucleoside and deoxyribonucleoside kinase activities in thymocytes. Specificity and optimal assay conditions for phosphorylation

1980 ◽  
Vol 58 (9) ◽  
pp. 677-682 ◽  
Author(s):  
Trevor Lukey ◽  
Floyd F. Snyder
Keyword(s):  
Density Gradient ◽  
Gradient Analysis ◽  
Sucrose Density Gradient ◽  
Adenosine Kinase ◽  
The Other ◽  
Deoxycytidine Kinase ◽  
Deoxyguanosine Kinase ◽  
Assay Conditions ◽  
Kinase A ◽  
Broad Specificity

The optimal assay conditions and specificity for the principal reactions of purine nucleoside phosphorylation were studied in mouse thymocytes. The following relative activities were obtained for the nucleoside substrates: adenosine, 100; deoxyguanosine, 24; and deoxyadenosine, 14. The phosphorylation of adenosine, 45 μM, was optimal between pH 5.8 and 6.0 with a millimolar Mg:ATP ratio of 1:5. This activity was insensitive to inhibition by other nucleosides and dCTP. Optimal phosphorylation of deoxyguanosine, 350 μM, occurred at pH 8.4 with a millimolar Mg:ATP ratio of 10:3.5. Phosphorylation of 80 μM deoxyguanosine was inhibited approximately 90% by 10 μM deoxycytidine or dCTP and was inhibited 70% by 200 μM deoxyadenosine but unaffected by adenosine. Deoxyadenosine, 450 μM, phorphorylation was optimal between pH 6.5 and 8.5 with a millimolar Mg:ATP ratio of 5:1. Phosphorylation of deoxyadenosine, 100 μM, was partially inhibited by 200 μM adenosine, 34%; 200 μM deoxyguanosine, 10%; and 100 μM deoxycytidine or dCTP, 33%. Only deoxyadenosine phosphorylation was inhibited by 200 μM deoxyinosine, 10%. These results and those obtained from isokinetic sucrose density gradient analysis are consistent with there being a specific adenosine kinase, a faster sedimenting deoxycytidine kinase of broad specificity which also catalyzes the phosphorylation of deoxyguanosine and deoxyadenosine, and a specific deoxyguanosine kinase sedimenting more rapidly than either of the other activities.

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