Insertion of the promoter for a variant surface glycoprotein gene expression site in an RNA polymerase II transcription unit of procyclic Trypanosoma brucei

1993 ◽  
Vol 57 (2) ◽  
pp. 295-304 ◽  
Author(s):  
Joost C.B.M. Zomerdijk ◽  
Rudo Kieft ◽  
Piet Borst
Keyword(s):  
Gene Expression ◽  
Rna Polymerase ◽  
Rna Polymerase Ii ◽  
Trypanosoma Brucei ◽  
Transcription Unit ◽  
Surface Glycoprotein ◽  
Variant Surface Glycoprotein ◽  
Glycoprotein Gene ◽  
Expression Site ◽  
Rna Polymerase Ii Transcription

Expression of a retroposon-like sequence upstream of the putative Trypanosoma brucei variant surface glycoprotein gene expression site promoter

1993 ◽  
Vol 13 (11) ◽  
pp. 7036-7044
Author(s):  
M J Lodes ◽  
B L Smiley ◽  
A W Stadnyk ◽  
J L Bennett ◽  
P J Myler ◽  
...  
Keyword(s):  
Gene Expression ◽  
Trypanosoma Brucei ◽  
Copy Number ◽  
Surface Glycoprotein ◽  
Variant Surface Glycoprotein ◽  
Putative Promoter ◽  
Glycoprotein Gene ◽  
Active Expression ◽  
Expression Site ◽  
Total Copy Number

We have cloned the region spanning the putative promoter from two variant surface glycoprotein gene expression sites that are at each end of chromosome M4 of Trypanosoma brucei IsTat 7. Both expression sites contain a retroposon-like sequence (ESR) pseudogene whose 3' end is approximately 30 bp upstream of the putative expression site promoter. The ESRs from both expression sites share considerable sequence homology and are related to LINE-like elements, especially the T. brucei ingi retroposon. Other ESRs are located on large, but not intermediate or mini-, chromosomes in the IsTaR 1 serodeme, and the total copy number is 10 to 20, similar to that estimated for variant surface glycoprotein expression sites. No DNA rearrangements in the vicinity of the ESR and putative expression site promoter were detected following antigenic switches in the IsTaR 1 serodeme. ESR transcripts are present in bloodstream, but not procyclic, forms. Variation in transcript size and sequence between bloodstream variant antigenic types implies that only the ESR from the active expression site is transcribed. This pattern of expression reflects that of sequences downstream of the putative expression site promoter, suggesting that the region of coordinately controlled expression extends upstream of this promoter.

scholarly journals Expression of a retroposon-like sequence upstream of the putative Trypanosoma brucei variant surface glycoprotein gene expression site promoter.

1993 ◽  
Vol 13 (11) ◽  
pp. 7036-7044 ◽  
Author(s):  
M J Lodes ◽  
B L Smiley ◽  
A W Stadnyk ◽  
J L Bennett ◽  
P J Myler ◽  
...  
Keyword(s):  
Gene Expression ◽  
Trypanosoma Brucei ◽  
Copy Number ◽  
Surface Glycoprotein ◽  
Variant Surface Glycoprotein ◽  
Putative Promoter ◽  
Glycoprotein Gene ◽  
Active Expression ◽  
Expression Site ◽  
Total Copy Number

We have cloned the region spanning the putative promoter from two variant surface glycoprotein gene expression sites that are at each end of chromosome M4 of Trypanosoma brucei IsTat 7. Both expression sites contain a retroposon-like sequence (ESR) pseudogene whose 3' end is approximately 30 bp upstream of the putative expression site promoter. The ESRs from both expression sites share considerable sequence homology and are related to LINE-like elements, especially the T. brucei ingi retroposon. Other ESRs are located on large, but not intermediate or mini-, chromosomes in the IsTaR 1 serodeme, and the total copy number is 10 to 20, similar to that estimated for variant surface glycoprotein expression sites. No DNA rearrangements in the vicinity of the ESR and putative expression site promoter were detected following antigenic switches in the IsTaR 1 serodeme. ESR transcripts are present in bloodstream, but not procyclic, forms. Variation in transcript size and sequence between bloodstream variant antigenic types implies that only the ESR from the active expression site is transcribed. This pattern of expression reflects that of sequences downstream of the putative expression site promoter, suggesting that the region of coordinately controlled expression extends upstream of this promoter.

scholarly journals A similar gene is shared by both the variant surface glycoprotein and procyclin gene transcription units of Trypanosoma brucei

1991 ◽  
Vol 11 (3) ◽  
pp. 1473-1479
Author(s):  
M Berberof ◽  
A Pays ◽  
E Pays
Keyword(s):  
Gene Expression ◽  
Life Cycle ◽  
Trypanosoma Brucei ◽  
Gene Transcription ◽  
Transcription Unit ◽  
Surface Glycoprotein ◽  
Variant Surface Glycoprotein ◽  
Polycistronic Transcription ◽  
Expression Site ◽  
Similar Gene

The genes for the variant surface glycoprotein (VSG) and procyclin are expressed in a mutually exclusive manner during the life cycle of Trypanosoma brucei and synthesize the most abundant mRNAs specific to the bloodstream and procyclic stages of the parasite, respectively. Genes belonging to the polycistronic transcription unit of the VSG gene (expression site-associated genes [ESAGs]) are uniquely expressed in the bloodstream form, but some members of ESAG families (genes related to ESAGs [GRESAGs]) are independently transcribed outside the VSG gene expression site. We report here that a gene related to ESAG 2, GRESAG 2.1, is present and expressed in a procyclin gene transcription unit (PARP A locus), which is polycistronic. Members of the ESAG 2 family are thus present in the two major differentially stage-regulated transcription units of this parasite.

scholarly journals Structure and transcription of a telomeric surface antigen gene of Trypanosoma brucei.

1985 ◽  
Vol 5 (3) ◽  
pp. 545-553 ◽  
Author(s):  
A Bernards ◽  
J M Kooter ◽  
P Borst
Keyword(s):  
Trypanosoma Brucei ◽  
Gene Segment ◽  
Similar Rate ◽  
Transcription Unit ◽  
Surface Glycoprotein ◽  
Variant Surface Glycoprotein ◽  
Coding Region ◽  
Gene Encoding ◽  
Glycoprotein Gene ◽  
Expression Site

The gene encoding variant surface glycoprotein 221 in Trypanosoma brucei is located adjacent to a chromosome end and can be activated with or without a concomitant gene duplication. To test whether transcription initiates within the cloned segment of the 221 gene, we analyzed nascent and stable transcripts. We show here that the 221 coding region and 8.5 kilobases of adjacent upstream DNA are transcribed into nascent RNA at a similar rate when gene 221 is activated without duplication. Since only part of this transcribed upstream segment is transferred with the coding region to another telomere upon duplicative activation of gene 221, we infer that initiation of variant surface glycoprotein gene transcription occurs outside the gene segment that moves into an expression site by gene conversion. Our analysis shows that part of the variant surface glycoprotein 221 transcription unit consists of an unusual 3.5-kilobase tandem array of ca. 50 repeat segments and that a rearrangement in this array accompanies the nonduplicative activation of gene 221. A variant surface glycoprotein pseudogene is located within the transcription unit of gene 221, and we discuss models that account for this unusual situation.

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