scholarly journals Novel Domain Arrangement in the Crystal Structure of a Truncated Acetyl-CoA Synthase fromMoorella thermoacetica,

Biochemistry ◽  
2009 ◽  
Vol 48 (33) ◽  
pp. 7916-7926 ◽  
Author(s):  
Anne Volbeda ◽  
Claudine Darnault ◽  
Xiangshi Tan ◽  
Paul A. Lindahl ◽  
Juan C. Fontecilla-Camps
Biochemistry ◽  
2009 ◽  
Vol 48 (50) ◽  
pp. 12058-12058 ◽  
Author(s):  
Anne Volbeda ◽  
Claudine Darnault ◽  
Xiangshi Tan ◽  
Paul A. Lindahl ◽  
Juan C. Fontecilla-Camps

Author(s):  
Matthew Wilding ◽  
Colin Scott ◽  
Thomas S. Peat ◽  
Janet Newman

The NAD-dependent malonate-semialdehyde dehydrogenase KES23460 fromPseudomonassp. strain AAC makes up half of a bicistronic operon responsible for β-alanine catabolism to produce acetyl-CoA. The KES23460 protein has been heterologously expressed, purified and used to generate crystals suitable for X-ray diffraction studies. The crystals belonged to space groupP212121and diffracted X-rays to beyond 3 Å resolution using the microfocus beamline of the Australian Synchrotron. The structure was solved using molecular replacement, with a monomer from PDB entry 4zz7 as the search model.


2005 ◽  
Vol 61 (a1) ◽  
pp. c189-c189
Author(s):  
R. Natsume ◽  
M. Yamada ◽  
M. Senda ◽  
T. Nakamatsu ◽  
S. Horinouchi ◽  
...  

Biochemistry ◽  
2003 ◽  
Vol 42 (10) ◽  
pp. 2866-2873 ◽  
Author(s):  
Andrew M. Gulick ◽  
Vincent J. Starai ◽  
Alexander R. Horswill ◽  
Kristen M. Homick ◽  
Jorge C. Escalante-Semerena

2020 ◽  
Vol 533 (3) ◽  
pp. 442-448
Author(s):  
Jiyeon Hong ◽  
Woojin Park ◽  
Hogyun Seo ◽  
Il-Kwon Kim ◽  
Kyung-Jin Kim

Nature ◽  
2015 ◽  
Vol 526 (7575) ◽  
pp. 723-727 ◽  
Author(s):  
Jia Wei ◽  
Liang Tong

2006 ◽  
Vol 188 (15) ◽  
pp. 5606-5617 ◽  
Author(s):  
Ming-Ni Hung ◽  
Erumbi Rangarajan ◽  
Christine Munger ◽  
Guy Nadeau ◽  
Traian Sulea ◽  
...  

ABSTRACT Enterobacterial common antigen (ECA) is a polysaccharide found on the outer membrane of virtually all gram-negative enteric bacteria and consists of three sugars, N-acetyl-d-glucosamine, N-acetyl-d-mannosaminuronic acid, and 4-acetamido-4,6-dideoxy-d-galactose, organized into trisaccharide repeating units having the sequence →3)-α-d-Fuc4NAc-(1→4)-β-d-ManNAcA-(1→4)-α-d-GlcNAc-(1→. While the precise function of ECA is unknown, it has been linked to the resistance of Shiga-toxin-producing Escherichia coli (STEC) O157:H7 to organic acids and the resistance of Salmonella enterica to bile salts. The final step in the synthesis of 4-acetamido-4,6-dideoxy-d-galactose, the acetyl-coenzyme A (CoA)-dependent acetylation of the 4-amino group, is carried out by TDP-fucosamine acetyltransferase (WecD). We have determined the crystal structure of WecD in apo form at a 1.95-Å resolution and bound to acetyl-CoA at a 1.66-Å resolution. WecD is a dimeric enzyme, with each monomer adopting the GNAT N-acetyltransferase fold, common to a number of enzymes involved in acetylation of histones, aminoglycoside antibiotics, serotonin, and sugars. The crystal structure of WecD, however, represents the first structure of a GNAT family member that acts on nucleotide sugars. Based on this cocrystal structure, we have used flexible docking to generate a WecD-bound model of the acetyl-CoA-TDP-fucosamine tetrahedral intermediate, representing the structure during acetyl transfer. Our structural data show that WecD does not possess a residue that directly functions as a catalytic base, although Tyr208 is well positioned to function as a general acid by protonating the thiolate anion of coenzyme A.


2007 ◽  
Vol 70 (1) ◽  
pp. 268-272 ◽  
Author(s):  
Yong Soon Cho ◽  
Jae Il Lee ◽  
Dongkyu Shin ◽  
Hyun Tae Kim ◽  
Young Hoon Cheon ◽  
...  

2012 ◽  
Vol 446 (3) ◽  
pp. 395-404 ◽  
Author(s):  
Kuo-Chang Cheng ◽  
Jhen-Ni Liao ◽  
Ping-Chiang Lyu

The daily cycle of melatonin biosynthesis in mammals is regulated by AANAT (arylalkylamine N-acetyltransferase; EC 2.3.1.87), making it an attractive target for therapeutic control of abnormal melatonin production in mood and sleep disorders. Drosophila melanogaster Dat (dopamine N-acetyltransferase) is an AANAT. Until the present study, no insect Dat structure had been solved, and, consequently, the structural basis for its acetyl-transfer activity was not well understood. We report in the present paper the high-resolution crystal structure for a D. melanogaster Dat–AcCoA (acetyl-CoA) complex obtained using one-edge (selenium) single-wavelength anomalous diffraction. A binding study using isothermal titration calorimetry suggested that the cofactor bound to Dat first before substrate. Examination of the complex structure and a substrate-docked model indicated that Dat contains a novel AANAT catalytic triad. Site-directed mutagenesis, kinetic studies and pH-rate profiles confirmed that Glu47, Ser182 and Ser186 were critical for catalysis. Collectively, the results of the present study suggest that Dat possesses a specialized active site structure dedicated to a catalytic mechanism.


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