Insights into the Phosphoryl-Transfer Mechanism of cAMP-Dependent Protein Kinase from Quantum Chemical Calculations and Molecular Dynamics Simulations

2004 ◽  
Vol 126 (2) ◽  
pp. 529-542 ◽  
Author(s):  
Natalia Díaz ◽  
Martin J. Field
Keyword(s):  
Molecular Dynamics ◽  
Protein Kinase ◽  
Molecular Dynamics Simulations ◽  
Quantum Chemical Calculations ◽  
Quantum Chemical ◽  
Transfer Mechanism ◽  
Phosphoryl Transfer ◽  
Dependent Protein Kinase ◽  
Dependent Protein ◽  
Dynamics Simulations

scholarly journals Conformational Equilibrium of N-Myristoylated cAMP-Dependent Protein Kinase A by Molecular Dynamics Simulations

Biochemistry ◽  
2012 ◽  
Vol 51 (51) ◽  
pp. 10186-10196 ◽  
Author(s):  
Alessandro Cembran ◽  
Larry R. Masterson ◽  
Christopher L. McClendon ◽  
Susan S. Taylor ◽  
Jiali Gao ◽  
...  
Keyword(s):  
Molecular Dynamics ◽  
Protein Kinase ◽  
Molecular Dynamics Simulations ◽  
Protein Kinase A ◽  
Conformational Equilibrium ◽  
Dependent Protein Kinase ◽  
Camp Dependent Protein Kinase ◽  
Dependent Protein ◽  
Dynamics Simulations ◽  
Kinase A

Investigation of the interfacial behavior of organics on sulfide semiconductor surfaces by quantum chemical calculations and molecular dynamics simulations

2021 ◽  
Author(s):  
Haiding Zhu ◽  
Xuefeng Ren ◽  
Shengxiang Yan ◽  
Xingyou Liang ◽  
Liguo Gao ◽  
...  
Keyword(s):  
Molecular Dynamics ◽  
Molecular Dynamics Simulations ◽  
Quantum Chemical Calculations ◽  
Organic Pollutants ◽  
Quantum Chemical ◽  
Semiconductor Surfaces ◽  
Interfacial Behavior ◽  
The World ◽  
Dynamics Simulations

The presence of organic pollutants in the world is harmful to our existence and the environment.

Raman optical activity of tetra-alanine in the poly(l-proline) II type peptide conformation

2017 ◽  
Vol 19 (3) ◽  
pp. 2078-2086 ◽  
Author(s):  
Masakazu Furuta ◽  
Tomotsumi Fujisawa ◽  
Hiroyasu Urago ◽  
Takahiro Eguchi ◽  
Takahito Shingae ◽  
...  
Keyword(s):  
Molecular Dynamics ◽  
Molecular Dynamics Simulations ◽  
Quantum Chemical Calculations ◽  
Optical Activity ◽  
Quantum Chemical ◽  
Peptide Conformation ◽  
Raman Optical Activity ◽  
Dynamics Simulations

Raman optical activity spectra of tetra-alanine was characterized by quantum chemical calculations combined with molecular dynamics simulations.

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