RING Domains Functioning as E3 Ligases Reveal Distinct Structural Features: A Molecular Dynamics Simulation Study

Jian-Hua Zhao; Ching-Tao Yang; Josephine W. Wu; Wei-Bor Tsai; Hsin-Yi Lin; Hsu-Wei Fang; Yih Ho; Hsuan-Liang Liu

doi:10.1080/07391102.2008.10507224

RING Domains Functioning as E3 Ligases Reveal Distinct Structural Features: A Molecular Dynamics Simulation Study

Journal of Biomolecular Structure and Dynamics ◽

10.1080/07391102.2008.10507224 ◽

2008 ◽

Vol 26 (1) ◽

pp. 65-73 ◽

Cited By ~ 19

Author(s):

Jian-Hua Zhao ◽

Ching-Tao Yang ◽

Josephine W. Wu ◽

Wei-Bor Tsai ◽

Hsin-Yi Lin ◽

...

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Simulation Study ◽

Structural Features ◽

Dynamics Simulation ◽

E3 Ligases ◽

Ring Domains

Download Full-text

Salient Structural Features of Human Lemur Tyrosine Kinase 3 (LMTK3) Domain from Molecular Dynamics Simulation Study

Current Biotechnology ◽

10.2174/2213529404666180125161856 ◽

2018 ◽

Vol 7 (4) ◽

pp. 309-316

Author(s):

Himakshi Sarma ◽

Venkata Satish Kumar Mattaparthi

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Tyrosine Kinase ◽

Simulation Study ◽

Structural Features ◽

Dynamics Simulation

Download Full-text

Molecular dynamics simulation study of the structural features and inclusion capacities of cucurbit[6]uril derivatives in aqueous solutions

Supramolecular Chemistry ◽

10.1080/10610278.2014.910601 ◽

2014 ◽

Vol 27 (1-2) ◽

pp. 80-89 ◽

Cited By ~ 5

Author(s):

Musa I. El-Barghouthi ◽

Hamzeh M. Abdel-Halim ◽

Feryal J. Haj-Ibrahim ◽

Khaleel I. Assaf

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Aqueous Solutions ◽

Simulation Study ◽

Structural Features ◽

Dynamics Simulation

Download Full-text

Structural features of cholesteryl ester transfer protein: A molecular dynamics simulation study

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.24200 ◽

2012 ◽

Vol 81 (3) ◽

pp. 415-425 ◽

Cited By ~ 19

Author(s):

Dongsheng Lei ◽

Xing Zhang ◽

Shengbo Jiang ◽

Zhaodi Cai ◽

Matthew J. Rames ◽

...

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Cholesteryl Ester ◽

Cholesteryl Ester Transfer Protein ◽

Simulation Study ◽

Protein A ◽

Structural Features ◽

Dynamics Simulation ◽

Transfer Protein

Download Full-text

Molecular dynamics simulation study of the response of polyurea to a shock

10.26226/morressier.5f5f8e69aa777f8ba5bd5f91 ◽

2020 ◽

Author(s):

Manva Manva

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Simulation Study ◽

Dynamics Simulation

Download Full-text

Ab initio path integral molecular dynamics simulation study on the dihydrogen bond of NH4+⋯BeH2

Chemical Physics Letters ◽

10.1016/j.cplett.2005.05.035 ◽

2005 ◽

Vol 410 (1-3) ◽

pp. 54-58 ◽

Cited By ~ 12

Author(s):

Aiko Hayashi ◽

Motoyuki Shiga ◽

Masanori Tachikawa

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Ab Initio ◽

Path Integral ◽

Simulation Study ◽

Dynamics Simulation ◽

Dihydrogen Bond

Download Full-text

Anomalous pressure dependence of the structure factor in 1,4-polybutadiene melts: A molecular dynamics simulation study

Physical Review E ◽

10.1103/physreve.70.011804 ◽

2004 ◽

Vol 70 (1) ◽

Cited By ~ 11

Author(s):

Dmitry Bedrov ◽

Grant D. Smith ◽

Wolfgang Paul

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Simulation Study ◽

Pressure Dependence ◽

Structure Factor ◽

Dynamics Simulation

Download Full-text

Regimes of Flow over Complex Structures of Endothelial Glycocalyx: A Molecular Dynamics Simulation Study

Scientific Reports ◽

10.1038/s41598-018-24041-7 ◽

2018 ◽

Vol 8 (1) ◽

Cited By ~ 6

Author(s):

Xi Zhuo Jiang ◽

Muye Feng ◽

Yiannis Ventikos ◽

Kai H. Luo

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Simulation Study ◽

Dynamics Simulation ◽

Endothelial Glycocalyx ◽

Complex Structures

Download Full-text

Molecular dynamics simulation study of the effect of a strong electric field on the structure of a poly(oxyethylene) chain in explicit solvents

Journal of Molecular Liquids ◽

10.1016/j.molliq.2021.116622 ◽

2021 ◽

pp. 116622

Author(s):

Šárka Dědičová ◽

Jan Dočkal ◽

Filip Moučka ◽

Jan Jirsák

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Electric Field ◽

Simulation Study ◽

Strong Electric Field ◽

Dynamics Simulation

Download Full-text

Iron coordination to pyochelin siderophore influences dynamics of FptA receptor from Pseudomonas aeruginosa: a molecular dynamics simulation study

BioMetals ◽

10.1007/s10534-021-00332-x ◽

2021 ◽

Author(s):

Sana Manzoor ◽

Ayaz Ahmed ◽

Syed Tarique Moin

Keyword(s):

Molecular Dynamics ◽

Pseudomonas Aeruginosa ◽

Molecular Dynamics Simulation ◽

Simulation Study ◽

Dynamics Simulation ◽

Iron Coordination

Download Full-text

Effect of urea and trimethyl N-oxide on the structure of parathyroid hormone (1-34): A molecular dynamics simulation study

10.1063/5.0017487 ◽

2020 ◽

Author(s):

Mayank Pal ◽

Dibyendu Bandyopadhyay ◽

Niharendu Choudhury

Keyword(s):

Molecular Dynamics ◽

Parathyroid Hormone ◽

Molecular Dynamics Simulation ◽

Simulation Study ◽

Dynamics Simulation

Download Full-text