scholarly journals Expression Patterns of Defense-Related Genes in Different Types of Arbuscular Mycorrhizal Development in Wild-Type and Mycorrhiza-Defective Mutant Tomato

2004 ◽  
Vol 17 (10) ◽  
pp. 1103-1113 ◽  
Author(s):  
Ling-Ling Gao ◽  
Wolfgang Knogge ◽  
Gabriele Delp ◽  
F. Andrew Smith ◽  
Sally E. Smith
Keyword(s):  
Expression Patterns ◽  
Arbuscular Mycorrhizal ◽  
Am Fungi ◽  
Root Surface ◽  
Fungal Species ◽  
Wild Type ◽  
Root Cortex ◽  
Defense Gene ◽  
Defective Mutant ◽  
In The Wild

The expression of defense-related genes was analyzed in the interactions of six arbuscular mycorrhizal (AM) fungi with the roots of wild-type tomato (Lycopersicon esculentum Mill.) cv. 76R and of the near-isogenic mycorrhiza-defective mutant rmc. Depending on the fungal species, wild-type tomato forms both major morphological AM types, Arum and Paris. The mutant rmc blocks the penetration of the root surface or invasion of the root cortex by most species of AM fungi, but one fungus has been shown to develop normal mycorrhizas. In the wild-type tomato, accumulation of mRNA representing a number of defense-related genes was low in Arum-type interactions, consistent with findings for this AM morphotype in other plant species. In contrast, Paris-type colonization, particularly by members of the family Gigasporaceae, was accompanied by a substantial transient increase in expression of some defense-related genes. However, the extent of root colonization did not differ significantly in the two wild-type AM morpho-types, suggesting that accumulation of defense gene products per se does not limit mycorrhiza development. In the mutant, interactions in which the fungus failed to penetrate the root lacked significant accumulation of defense gene mRNAs. However, phenotypes in which the fungus penetrated epidermal or hypodermal cells were associated with an enhanced and more prolonged gene expression. These results are discussed in relation to the mechanisms that may underlie the specificity of the interactions between AM fungi and the rmc mutant.

The rmc locus does not affect plant interactions or defence-related gene expression when tomato (Solanum lycopersicum) is infected with the root fungal parasite, Rhizoctonia

2006 ◽  
Vol 33 (3) ◽  
pp. 289 ◽  
Author(s):  
Ling-Ling Gao ◽  
F. Andrew Smith ◽  
Sally E. Smith
Keyword(s):  
Gene Expression ◽  
Molecular Mechanisms ◽  
Arbuscular Mycorrhizal ◽  
Am Fungi ◽  
Fungal Species ◽  
Plant Interactions ◽  
Related Gene ◽  
Wild Type ◽  
Cell Layers ◽  
Almost All

A tomato mutant with reduced mycorrhizal colonisation, rmc, confers resistance to almost all arbuscular mycorrhizal (AM) fungal species tested, although there is variation in colonisation of different root cell layers by different fungi and one species of AM fungus can colonise this mutant relatively normally. These variations indicate a high degree of specificity in relation to AM colonisation. We explored the possibility of specificity or otherwise in interactions between rmc and three non-AM root-infecting fungi, Rhizoctonia solani anastomosis groups (AG) 4 and AG8, and binucleate Rhizoctonia (BNR). There were no differences between the wild type tomato 76R and rmc in the speed or extent to which these fungi infected roots or caused disease. Infection by R. solani induced high levels of defence-related gene expression in both tomato genotypes relative to non-infected plants. In contrast, with BNR the expression of these genes was not induced or induced to a much lower extent than with R. solani. The expression of defence-related genes with these two non-AM fungi was very similar in the two plant genotypes. It was different from effects observed during colonisation by AM fungi, which enhanced expression of defence-related genes in rmc compared with the wild type tomato. The specificity and molecular mechanisms of rmc in control of AM colonisation are discussed.

scholarly journals Arbuscular mycorrhiza and dark septate endophyte fungal associations of Oryza sativa L. under field condition: colonization features and their occurrence

2019 ◽  
Vol 6 (1) ◽  
pp. 63-70
Author(s):  
Kripamoy Chakraborty ◽  
Subam Banik ◽  
Atithi Debnath ◽  
Aparajita Roy Das ◽  
Ajay Krishna Saha ◽  
...  
Keyword(s):  
Oryza Sativa L ◽  
Arbuscular Mycorrhizal ◽  
Am Fungi ◽  
Fungal Species ◽  
Chemical Fertilizers ◽  
Dark Septate Endophyte ◽  
Root Cortex ◽  
The Third ◽  
Fungal Associations ◽  
Local Farmers

The present study was aimed to study monthly colonization of arbuscular mycorrhizal (AM) and dark septate endophyte (DSE) fungal associations in rice. The presence of mycorrhizal structures in the roots confirms the colonization by AM fungi. The pattern of hyphae and arbuscules denotes Arum type of AM fungal morphology. The presence of dark coloured septate hyphae running frequently on the epidermal layer and in root cortex and the occurrence of microsclerotia marks the colonization by DSE fungi. The co-occurrence of both AM and DSE fungi ensure dual colonization by two distinct fungal groups. There was significant increase in arbuscules, vesicles and hyphal percentages from first to third month in both the samples collected from two sites. In the third month, AM colonization significantly higher in both the sites. DSE colonization percentages do not differ significantly in first to third month. A total of nine AM fungal species were recovered from two sites. This study is an effort to make aware the local farmers about the usefulness of these native AM mycobiota which can be a preferable choice over chemical fertilizers leading to ecofriendly organic farming.

scholarly journals OsRAM2 function in lipid biosynthesis is required for arbuscular mycorrhizal symbiosis in rice

2021 ◽  
Author(s):  
Ying-Na Liu ◽  
Cheng-Chen Liu ◽  
An-Qi Zhu ◽  
Ke-Xin Niu ◽  
Rui Guo ◽  
...  
Keyword(s):  
Expression Patterns ◽  
Arbuscular Mycorrhizal ◽  
Am Fungi ◽  
Root Surface ◽  
Mycorrhizal Symbiosis ◽  
Cortical Cells ◽  
Mutualistic Symbiosis ◽  
Fungal Hyphae ◽  
Mutant Lines

Arbuscular mycorrhiza (AM) is a mutualistic symbiosis formed between most land plants and Glomeromycotina fungi. During the symbiosis, plants provide organic carbon to fungi in exchange for mineral nutrients. Previous legume studies showed that the Required for Arbuscular Mycorrhization2 (RAM2) gene is necessary for transferring lipids from plants to AM fungi (AMF) and is also likely to play a ‘signaling’ role at the root surface. To further explore RAM2 functions in other plant lineages, in this study, two rice (Oryza sativa) genes, OsRAM2 and OsRAM2L, were identified as orthologs of legume RAM2. Examining their expression patterns during symbiosis revealed that only OsRAM2 was strongly upregulated upon AMF inoculation. CRISPR/Cas9 mutagenesis was then performed to obtain three Osram2 mutant lines (-1, -2, and -3). After inoculation by AMF Rhizophagus irregularis or Funneliformis mosseae, all the mutant lines showed extremely low colonization rates and the rarely observed arbuscules were all defective, thus supporting a conserved ‘nutritional’ role of RAM2 between monocot and dicot lineages. As for the ‘signaling’ role, although the hyphopodia numbers formed by both AMF on Osram2 mutants were indeed reduced, their morphology showed no abnormality, with fungal hyphae invading roots successfully. Promoter activities further indicated OsRAM2 was not expressed in epidermal cells below hyphopodia or outer cortical cells enclosing fungal hyphae, but expressed exclusively in cortical cells containing arbuscules. It therefore suggested an indirect role of RAM2 rather than a direct involvement in determining the symbiosis signals at the root surface.

Pax6 regulates specification of ventral neurone subtypes in the hindbrain by establishing progenitor domains

Development ◽  
2002 ◽  
Vol 129 (6) ◽  
pp. 1327-1338 ◽  
Author(s):  
Masanori Takahashi ◽  
Noriko Osumi
Keyword(s):  
Expression Patterns ◽  
Domain Formation ◽  
Wild Type ◽  
Whole Embryo Culture ◽  
Neuronal Markers ◽  
Signalling Molecules ◽  
Neuronal Progenitors ◽  
In The Wild ◽  
Mutant Rat

Recent studies have shown that generation of different kinds of neurones is controlled by combinatorial actions of homeodomain (HD) proteins expressed in the neuronal progenitors. Pax6 is a HD protein that has previously been shown to be involved in the differentiation of the hindbrain somatic (SM) motoneurones and V1 interneurones in the hindbrain and/or spinal cord. To investigate in greater depth the role of Pax6 in generation of the ventral neurones, we first examined the expression patterns of HD protein genes and subtype-specific neuronal markers in the hindbrain of the Pax6 homozygous mutant rat. We found that Islet2 (SM neurone marker) and En1 (V1 interneurone marker) were transiently expressed in a small number of cells, indicating that Pax6 is not directly required for specification of these neurones. We also observed that domains of all other HD protein genes (Nkx2.2, Nkx6.1, Irx3, Dbx2 and Dbx1) were shifted and their boundaries became blurred. Thus, Pax6 is required for establishment of the progenitor domains of the ventral neurones. Next, we performed Pax6 overexpression experiments by electroporating rat embryos in whole embryo culture. Pax6 overexpression in the wild type decreased expression of Nkx2.2, but ectopically increased expression of Irx3, Dbx1 and Dbx2. Moreover, electroporation of Pax6 into the Pax6 mutant hindbrain rescued the development of Islet2-positive and En1-positive neurones. To know reasons for perturbed progenitor domain formation in Pax6 mutant, we examined expression patterns of Shh signalling molecules and states of cell death and cell proliferation. Shh was similarly expressed in the floor plate of the mutant hindbrain, while the expressions of Ptc1, Gli1 and Gli2 were altered only in the progenitor domains for the motoneurones. The position and number of TUNEL-positive cells were unchanged in the Pax6 mutant. Although the proportion of cells that were BrdU-positive slightly increased in the mutant, there was no relationship with specific progenitor domains. Taken together, we conclude that Pax6 regulates specification of the ventral neurone subtypes by establishing the correct progenitor domains.

scholarly journals Growth model for arbuscular mycorrhizal fungi

2007 ◽  
Vol 5 (24) ◽  
pp. 773-784 ◽  
Author(s):  
A Schnepf ◽  
T Roose ◽  
P Schweiger
Keyword(s):  
Mycorrhizal Fungi ◽  
Trifolium Subterraneum ◽  
Arbuscular Mycorrhizal ◽  
Am Fungi ◽  
Fungal Species ◽  
Foraging Strategies ◽  
Fungal Mycelium ◽  
Hyphal Length ◽  
Solute Uptake ◽  
Acaulospora Laevis

In order to quantify the contribution of arbuscular mycorrhizal (AM) fungi to plant phosphorus nutrition, the development and extent of the external fungal mycelium and its nutrient uptake capacity are of particular importance. We develop and analyse a model of the growth of AM fungi associated with plant roots, suitable for describing mechanistically the effects of the fungi on solute uptake by plants. The model describes the development and distribution of the fungal mycelium in soil in terms of the creation and death of hyphae, tip–tip and tip–hypha anastomosis, and the nature of the root–fungus interface. It is calibrated and corroborated using published experimental data for hyphal length densities at different distances away from root surfaces. A good agreement between measured and simulated values was found for three fungal species with different morphologies: Scutellospora calospora (Nicol. & Gerd.) Walker & Sanders; Glomus sp.; and Acaulospora laevis Gerdemann & Trappe associated with Trifolium subterraneum L. The model and findings are expected to contribute to the quantification of the role of AM fungi in plant mineral nutrition and the interpretation of different foraging strategies among fungal species.

Regulation of scute function by extramacrochaete in vitro and in vivo

Development ◽  
1994 ◽  
Vol 120 (12) ◽  
pp. 3595-3603 ◽  
Author(s):  
C.V. Cabrera ◽  
M.C. Alonso ◽  
H. Huikeshoven
Keyword(s):  
Expression Patterns ◽  
Transcription Activation ◽  
Loss Of Function ◽  
Wild Type ◽  
Helix Loop Helix ◽  
In The Wild ◽  
Yeast Assay ◽  
Number Of Cells

The pattern of adult sensilla in Drosophila is established by the dosage-sensitive interaction of two antagonistic groups of genes. Sensilla development is promoted by members of the achaete-scute complex and the daughterless gene whereas it is suppressed by whereas extramacrochaete (emc) and hairy. All these genes encode helix-loop-helix proteins. The products of the achaete-scute complex and daughterless interact to form heterodimers able to activate transcription. In this report, we show that (1) extra-macrochaete forms heterodimers with the achaete, scute, lethal of scute and daughterless products; (2) extramacrochaete inhibits DNA-binding of Achaete, Scute and Lethal of Scute/Daughterless heterodimers and Daughterless homodimers and (3) extramacrochaete inhibits transcription activation by heterodimers in a yeast assay system. In addition, we have studied the expression patterns of scute in wild-type and extramacrochaete mutant imaginal discs. Expression of scute RNA during imaginal development occurs in groups of cells, but high levels of protein accumulate in the nuclei of only a subset of the RNA-expressing cells. The pattern is dynamic and results in a small number of protein-containing cells that correspond to sensillum precursors. extramacrochaete loss-of-function alleles develop extra sensilla and correspondingly display a larger number of cells with scute protein. These cells appear to arise from those that in the wild type already express scute RNA; hence, extramacrochaete is a repressor of scute function whose action may take place post-transcriptionally.

scholarly journals Fungal Lipid Accumulation and Development of Mycelial Structures by Two Arbuscular Mycorrhizal Fungi

2003 ◽  
Vol 69 (11) ◽  
pp. 6762-6767 ◽  
Author(s):  
Ingrid M. van Aarle ◽  
Pål Axel Olsson
Keyword(s):  
Fatty Acid ◽  
Mycorrhizal Fungi ◽  
Glomus Intraradices ◽  
Neutral Lipids ◽  
Phospholipid Fatty Acid ◽  
Plantago Lanceolata ◽  
Arbuscular Mycorrhizal ◽  
Am Fungi ◽  
Fungal Species ◽  
Opposite Pattern

ABSTRACT We monitored the development of intraradical and extraradical mycelia of the arbuscular mycorrhizal (AM) fungi Scutellospora calospora and Glomus intraradices when colonizing Plantago lanceolata. The occurrence of arbuscules (branched hyphal structures) and vesicles (lipid storage organs) was compared with the amounts of signature fatty acids. The fatty acid 16:1ω5 was used as a signature for both AM fungal phospholipids (membrane constituents) and neutral lipids (energy storage) in roots (intraradical mycelium) and in soil (extraradical mycelium). The formation of arbuscules and the accumulation of AM fungal phospholipids in intraradical mycelium followed each other closely in both fungal species. In contrast, the neutral lipids of G. intraradices increased continuously in the intraradical mycelium, while vesicle occurrence decreased after initial rapid root colonization by the fungus. S. calospora does not form vesicles and accumulated more neutral lipids in extraradical than in intraradical mycelium, while the opposite pattern was found for G. intraradices. G. intraradices allocated more of its lipids to storage than did S. calospora. Thus, within a species, the fatty acid 16:1ω5 is a good indicator for AM fungal development. The phospholipid fatty acid 16:1ω5 is especially suitable for indicating the frequency of arbuscules in the symbiosis. We propose that the ratio of neutral lipids to phospholipids is more important than is the presence of vesicles in determining the storage status of AM fungi.

scholarly journals Regulation of Hydrogen Peroxide-Dependent Gene Expression in Rhodobacter sphaeroides: Regulatory Functions of OxyR

2007 ◽  
Vol 189 (10) ◽  
pp. 3784-3792 ◽  
Author(s):  
Tanja Zeller ◽  
Mobarak A. Mraheil ◽  
Oleg V. Moskvin ◽  
Kuanyu Li ◽  
Mark Gomelsky ◽  
...  
Keyword(s):  
Hydrogen Peroxide ◽  
Rhodobacter Sphaeroides ◽  
Expression Patterns ◽  
Class Iii ◽  
Wild Type ◽  
Binding Studies ◽  
Regulatory Pathways ◽  
Mutant Strains ◽  
In The Wild

ABSTRACT Genome-wide transcriptome profiling was used to reveal hydrogen peroxide (H2O2)-dependent regulatory mechanisms in the facultatively photosynthetic bacterium Rhodobacter sphaeroides. In this study we focused on the role of the OxyR protein, a known regulator of the H2O2 response in bacteria. The transcriptome profiles of R. sphaeroides wild-type and oxyR mutant strains that were exposed to 1 mM H2O2 for 7 min or were not exposed to H2O2 were analyzed. Three classes of OxyR-dependent genes were identified based on their expression patterns in the wild type of oxyR mutant strains with differing predicted roles of oxidized and reduced OxyR as activators of transcription. DNA binding studies revealed that OxyR binds upstream of class I genes, which are induced by H2O2 and exhibit similar basal levels of expression in the wild-type and oxyR mutant strains. The effect of OxyR on class II genes, which are also induced by H2O2 but exhibit significantly lower basal levels of expression in the wild-type strain than in the mutant, is indirect. Interestingly, reduced OxyR also activates expression of few genes (class III). The role of reduced OxyR as an activator is shown for the first time. Our data reveal that the OxyR-mediated response is fast and transient. In addition, we found that additional regulatory pathways are involved in the H2O2 response.

scholarly journals Mycorrhizal Fungi Enhance Resistance to Herbivores in Tomato Plants with Reduced Jasmonic Acid Production

Agronomy ◽  
2019 ◽  
Vol 9 (3) ◽  
pp. 131 ◽  
Author(s):  
Ludovico Formenti ◽  
Sergio Rasmann
Keyword(s):  
Plant Growth ◽  
Jasmonic Acid ◽  
Plant Resistance ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Am Fungi ◽  
Wild Type ◽  
Tomato Plants ◽  
Solanum Lycopersicum L ◽  
Fungal Inoculation

Arbuscular mycorrhizal (AM) fungi favor plant growth by improving nutrient acquisition, but also by increasing their resistance against abiotic and biotic stressors, including herbivory. Mechanisms of AM fungal mediated increased resistance include a direct effect of AM fungi on plant vigor, but also a manipulation of the hormonal cascades, such as the systemic activation of jasmonic acid (JA) dependent defenses. However, how AM fungal inoculation and variation in the endogenous JA production interact to produce increased resistance against insect herbivores remains to be further elucidated. To address this question, three genotypes of Solanum lycopersicum L., a JA-biosynthesis deficient mutant, a JA over-accumulating mutant, and their wild-type were either inoculated with AM fungi or left un-inoculated. Plant growth-related traits and resistance against Spodoptera littoralis (Boisduval) caterpillars, a major crop pest, were measured. Overall, we found that deficiency in JA production reduced plant development and were the least resistant against S. littoralis. Moreover, AM fungi increased plant resistance against S. littoralis, but such beneficial effect was more pronounced in JA-deficient plant than on JA over-accumulating plants. These results highlight that AM fungi-driven increased plant resistance is negatively affected by the ability of plants to produce JA and that AM fungi complement JA-mediated endogenous plant defenses in this system.

Molecular analysis of the hull-less seed trait in pumpkin: expression profiles of genes related to seed coat development11

2005 ◽  
Vol 15 (3) ◽  
pp. 205-217 ◽  
Author(s):  
Todd N. Bezold ◽  
Dennis Mathews ◽  
J. Brent Loy ◽  
Subhash C. Minocha
Keyword(s):  
Cell Wall ◽  
Seed Coat ◽  
Secondary Cell Wall ◽  
Expression Profiles ◽  
Expression Patterns ◽  
Lignin Biosynthesis ◽  
Molecular Data ◽  
Wild Type ◽  
In The Wild ◽  
Cell Wall Development

We undertook a comparative study of molecular changes during development of seed coats in the wild-type and a recessive hull-less mutant of pumpkin (Cucurbita pepo L.), with the goal of identifying key genes involved in secondary cell wall development in the testa. The mature mutant testa has reduced amounts of cellulose and lignin as compared to the wild type. The expression patterns of several genes involved in secondary cell wall biosynthesis during the development of the testa are described. These genes are: CELLULOSE SYNTHASE, PHENYLALANINE AMMONIA-LYASE, 4-COUMARATE-CoA LIGASE, and CINNAMOYL-CoA REDUCTASE. Additionally, the expression patterns of a few genes that were differentially expressed in the two genotypes during testa development (GLUTATHIONE REDUCTASE, ABSCISIC ACID RESPONSE PROTEIN E, a SERINE-THREONINE KINASE, and a β-UREIDOPROPIONASE) are presented. The results show a coordinated expression of several genes involved in cellulose and lignin biosynthesis, as well as marked differences in the level of their expression between the two genotypes during testa development. There is generally a higher expression of genes involved in cellulose and lignin biosynthesis in the wild-type testa as compared to the mutant. The molecular data presented here are consistent with anatomical and biochemical differences between the wild-type and the mutant testae. An understanding of the genes involved in cell wall development in the testa will facilitate the manipulation of seed coat development in Cucurbita and other species for diverse commercial applications.

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