scholarly journals First Report of Black Root Rot Caused by Thielaviopsis basicola on Soybean (Glycine max) in Arkansas

Plant Disease ◽  
2010 ◽  
Vol 94 (9) ◽  
pp. 1168-1168 ◽  
Author(s):  
W. S. Monfort ◽  
A. G. Carroll ◽  
M. J. Emerson ◽  
J. Fortner ◽  
C. S. Rothrock

Thielaviopsis basicola (Berk. & Broome) Ferraris (synonym Chalara elegans Nag Raj & Kendrick) is a soilborne plant-pathogenic fungus reported in many parts of the world. In Arkansas, T. basicola is found commonly in cotton fields (4). This fungus colonizes cortical tissue of seedlings under cool wet conditions, causing a dark brown or black discoloration of the roots and hypocotyls, resulting in stunted, slow-developing plants (4). In 2008, large areas of stunted soybean plants with shortened internodes were reported in a field in Phillips County, AR, where cotton had previously been produced. Soybean was planted in this field in early April when cool soil temperatures (~21 to 24°C) prevailed. Soybean plants at the v3 to v5 growth stages were observed to have extensive areas of black cortical root necrosis. Plant samples were collected and roots were excised, washed, and surface disinfested in a 10% NaOCl solution. Root segments were incubated on the carrot-based selective medium TB-CEN (3). T. basicola was isolated from incubated segments after 2 weeks at 21°C in the dark. Chlamydospore chains (44.8 to 56.0 × 8.4 to 11.2 μm) consisting of an average of six spores and endoconidia (8 to 30 × 3 to 5 μm) were observed with a compound microscope. In addition to plant tissue, soil was assayed and confirmed to be positive for T. basicola by the pour plate technique (3) with the medium TB-CEN. Greenhouse trials were conducted to confirm field observations. Soil from the Phillips County field was sterilized and reinfested with 100 CFU of chlaymdospore suspension per gram (dry weight) of soil. Fifty soybean seeds (cv. Schillinger 457) were planted in infested and sterilized soil and grown for 29 days. Results showed that 38% of plants germinated and survived in the T. basicola-infested soil compared with 71% in the sterile soil treatment. Fifteen of the nineteen plants that survived in the infested soil were positive for T. basicola, while all plants in the sterilized soil were negative for the fungus. Soybean has previously been reported to be a host of T. basicola worldwide, but North American reports have been confined to Canada and Michigan, where cool soil temperatures persist for longer periods during the early part of the growing season (1,2). To our knowledge, this is the first report of T. basicola being important in the growth of soybean in warmer latitudes where the pathogen has been observed frequently on cotton and tobacco. In areas where cotton has historically suffered seedling damage from T. basicola, black root rot may become important on soybean as production of the latter crop increases. Since the initial field observation and confirmation in 2008, multiple soybean fields in 10 Arkansas counties have been documented with black root rot, with an estimated 5 to 30% of plants in each field infected. References: (1) T. R. Anderson. Can. J. Plant Pathol. 6:71, 1984. (2) J. L. Lockwood et al. Plant Dis. Rep. 54:849, 1970. (3) L. P. Specht and G. J. Griffin. Can. J. Plant Pathol. 7:438, 1985. (4) N. R. Walker et al. Phytopathology 89:613, 1999.

Plant Disease ◽  
2004 ◽  
Vol 88 (4) ◽  
pp. 425-425 ◽  
Author(s):  
C. Cappelli ◽  
V. M. Stravato ◽  
G. Carannante ◽  
R. Parisella

During April 2002 to September 2003 in unheated plastic greenhouses located in Fondi and Sperlonga (Latium Region of central Italy), in which more than 100 ha of cucumber (Cucumis sativus L.) were cultivated, an unusual disease causing decay of roots and plant wilting was observed. Many of the most common cultivars showed susceptibility, and in some farms, severe economic losses occurred. Disease symptoms observed on young plants included stunting, wilting, black root rot, and marked reduction of root development where pseudosclerotial structures were produced. The degree of root symptoms was proportional to the wilting. During periods of high evapotranspiration, wilting was severe in plants at the early stages of disease development, and even lightly infected plants wilted rapidly. Symptoms resembled those caused by vascular wilt fungi and were generally more severe in greenhouses with poorly drained soils. Samples from each of four greenhouses were collected during different periods of the growing season. Each sampling unit consisted of five to eight root pieces that were surface disinfected in 0.1% HgCl2 for 30 s, rinsed in sterile water, placed on petri dishes containing potato dextrose agar (pH 5.5), and incubated for 7 days at 25°C. Phomopsis sclerotioides van Kesteren (1,2) (identification confirmed by R. A. Samson, Centraalbureau voor Schimmelcultures of Utrecht, the Netherlands) was consistently recovered from affected tissues. Subcultures of three isolates were prepared and evaluated for pathogenicity. The experiments were conducted in a greenhouse with a 12-h photoperiod at 25 to 32°C. Seven-week-old seedlings (20 representatives per isolate) of a susceptible hybrid were dipped for 2 min in an agar slurry suspension of the pathogen and then returned to pots. Within 4 to 5 weeks after inoculation, all plants inoculated with each P. sclerotioides isolate showed the same symptoms observed in the field and caused wilting and death of approximately 80% of the inoculated plants. P. sclerotioides was consistently reisolated from the symptomatic test plant, whereas the fungus was never isolated from control plants. Another experiment using naturally infested soil in comparison with sterilized soil confirmed the soilborne nature of the fungus and its pathogenicity. To our knowledge, this is the first report of P. sclerotioides on cucumber in Italy. According to the experience of farmers and agricultural consultants, the disease was first observed in the last 3 to 4 years in unheated plastic greenhouses. However, we cannot exclude the possibility that the disease may have been present in central Italy prior to our observations, since it can be misdiagnosed and the symptoms can be masked by symptoms of other diseases. For these reasons, an accurate monitoring of the pathogen is necessary to determine the magnitude of the problem and its impact on the industry. Management practices that include long-term crop rotation with nonsusceptible hosts, removal and destruction of infected crop debris, and steam soil sterilization are suggested to reduce the economic losses. References: (1) E. Punithalingam et al. No. 461 in: Descriptions of Pathogenic Fungi and Bacteria. CMI, Kew, Surrey, U.K., 1975. (2) H. A. Van Kesteren. Neth. J. Plant Pathol. 73:112, 1967.


Plant Disease ◽  
2009 ◽  
Vol 93 (4) ◽  
pp. 354-362 ◽  
Author(s):  
Harun Toksoz ◽  
Craig S. Rothrock ◽  
Terrence L. Kirkpatrick

The efficacy of triazole and host resistance–inducing seed treatment chemicals was examined for black root rot on cotton caused by Thielaviopsis basicola in both artificially and naturally infested soils with and without nematodes. In naturally infested soil, myclobutanil was effective in reducing root and hypocotyl discoloration over a wide range of soil population densities. Treatments containing high rates (42 g a.i./100 kg seed) of myclobutanil provided greater reductions in disease than low rates (21 g a.i./100 kg seed) in some experiments. Acibenzolar-S-methyl applied to the seed reduced black root rot or colonization by T. basicola on seedlings in artificially infested soils. Rates of acibenzolar-S-methyl did not differ in efficacy. In controlled studies, root colonization by T. basicola was significantly lower when seeds were treated with both myclobutanil and acibenzolar-S-methyl than with either chemical alone. In naturally infested soil under low (24 CFU/g soil) and high (154 CFU/g soil) populations of T. basicola, a combination of myclobutanil and acibenzolar-S-methyl at the high rate resulted in the lowest root discoloration and colonization. The nematicide seed treatment abamectin improved the control of black root rot in the presence of Meloidogyne incognita. The semi-selective medium TB-CEN allowed the importance of T. basicola to be evaluated in the presence of other pathogens that contribute to the seedling disease complex on cotton by quantifying the isolation frequency and percent colonization of T. basicola.


2021 ◽  
Vol 53 (1) ◽  
pp. 283-287
Author(s):  
Julia A. Martino ◽  
Liliana del Valle Di Feo ◽  
Mauro Paccioretti ◽  
Clara Adriana Contardi ◽  
Miguel A. Sanchez ◽  
...  

Symptomatic sweet potato cv Arapey INIA samples were collected from a commercial production field in Colonia Molina, Guaymallén department, Mendoza province, Argentina. They showed dark rounded lesions, sometimes coalescing with white granular mycelium. Fungus was obtained from symptomatic sweet potatoes, which represented the generalized infection that affected the crop. They were seeded in PDA with streptomycin sulfate and incubated for seven days at 21°C, alternating white/black (UV400nm) light. Observations with an optical microscope revealed the presence of hyaline, not septated, cylindrical endoconidia with rounded ends. They were 8-16 μm length and 4–6 μm width. Phialides were 43-46 μm length, rounded bases (7-9 μm width) and tapering to the neck´s tip (4-6 μm width). Brown chlamydospores (aleuriospores), 9-13 μm length and 8-12 μm width, in chains of 2-8 spores were observed. For molecular identification, total genomic DNA was extracted. ITS fragment of 565 pb was amplified using ITS5/ITS4 primers and sequenced. The sequence indicated 99% identity with Berkeleyomyces basicola (synonymous: Thielaviopsis basicola). This was deposited in GenBank as (KX580957) (CBS: C430.74, Gen Bank accession number AF275482.1). This is the first report of B. basicola in sweet potato in Argentina, a potential threat to storage root yields. Highlights: Sweet potato black root rot, new disease in Argentina. First report of Berkeleyomyces basicola  causing black root rot on sweet potato in Mendoza, Argentina.


Plant Disease ◽  
2008 ◽  
Vol 92 (9) ◽  
pp. 1368-1368 ◽  
Author(s):  
S. T. Koike

In 2005 and 2006, field-grown iceberg lettuce (Lactuca sativa) in California's coastal Salinas Valley (Monterey County) was affected by a previously unreported disease. Symptoms were observed on iceberg lettuce at the post-thin rosette stage (8 to 12 leaves). Plants were stunted and slightly chlorotic. Fine feeder roots had numerous, small (4 to 8 mm long), elongated, dark brown-to-black lesions. Larger secondary roots and taproots lacked lesions. No vascular discoloration was present. Isolations from root lesions consistently resulted in gray fungal colonies that formed catenulate, cylindrical, thin-walled, hyaline endoconidia and catenulate, subrectangular, thick-walled, dark aleuriospores. The fungus was identified as Thielaviopsis basicola (2). Conidial suspensions (5.0 × 105) of eight isolates from iceberg lettuce were used for pathogenicity tests. Iceberg cv. Ponderosa and romaine cv. Winchester were grown for 3 weeks in soilless peat moss rooting mix. Roots of 20 plants per cultivar were washed free of the rooting mix and soaked in conidial suspensions for 5 min. Plants were repotted and grown in a greenhouse. Control plant roots were soaked in sterile distilled water (SDW). After 3 weeks, inoculated iceberg exhibited slight chlorosis in comparison with control plants. Feeder roots of all iceberg plants inoculated with the eight isolates exhibited numerous black lesions and T. basicola was reisolated from these roots. Romaine lettuce, however, did not show any foliar symptoms. Small segments of roots had tan-to-light brown discoloration and T. basicola was occasionally reisolated (approximately 40% recovery). Roots of control iceberg and romaine showed no symptoms. Results were similar when this experiment was repeated. To explore the host range of T. basicola recovered from lettuce, two isolates were prepared and inoculated as described above onto 12 plants each of the following: iceberg lettuce (cv. Ponderosa), bean (cv. Blue Lake), broccoli (cv. Patriot), carrot (cv. Long Imperator #58), celery (cv. Conquistador), cotton (cv. Phy-72 Acala), cucumber (cv. Marketmore 76), green bunching onion (cv. Evergreen Bunching), parsley (cv. Moss Curled), pepper (cv. California Wonder 300 TMR), radish (cv. Champion), spinach (cvs. Bolero and Bossanova), and tomato (cv. Beefsteak). Control plant roots of all cultivars were soaked in SDW. After 4 weeks, only lettuce and bean roots had extensive brown-to-black lesions, from which the pathogen was consistently resiolated. Roots of cotton, pepper, spinach, and tomato had sections of light brown-to-orange discoloration; the pathogen was not consistently recovered from these sections. All other species and the control plants were symptomless. This experiment was repeated with similar results except that inoculated peppers were distinctly stunted compared with control plants. To my knowledge, this is the first report of black root rot caused by T. basicola on lettuce in California. Disease was limited to patches along edges of iceberg lettuce fields; disease incidence in these discrete patches reached as high as 35%. Affected plants continued to grow but remained stunted in relation to unaffected plants and were not harvested. Black root rot of lettuce has been reported in Australia (1); that report also showed that lettuce cultivars vary in susceptibility to T. basicola and isolates from lettuce were highly aggressive on bean but not on many other reported hosts of this pathogen. References: (1) R. G. O'Brien and R. D. Davis. Australas. Plant Pathol. 23:106, 1994. (2) C. V. Subramanian. No. 170 in: Descriptions of Pathogenic Fungi and Bacteria. CMI, Kew, Surrey, UK, 1968.


Plant Disease ◽  
2011 ◽  
Vol 95 (10) ◽  
pp. 1316-1316 ◽  
Author(s):  
M. M. Díaz Arias ◽  
G. P. Munkvold ◽  
L. F. Leandro

Fusarium spp. are widespread soilborne pathogens that cause important soybean diseases such as damping-off, root rot, Fusarium wilt, and sudden death syndrome. At least 12 species of Fusarium, including F. proliferatum, have been associated with soybean roots, but their relative aggressiveness as root rot pathogens is not known and pathogenicity has not been established for all reported species (2). In collaboration with 12 Iowa State University extension specialists, soybean roots were arbitrarily sampled from three fields in each of 98 Iowa counties from 2007 to 2009. Ten plants were collected from each field at V2-V3 and R3-R4 growth stages (2). Typical symptoms of Fusarium root rot (2) were observed. Symptomatic and asymptomatic root pieces were superficially sterilized in 0.5% NaOCl for 2 min, rinsed three times in sterile distilled water, and placed onto a Fusarium selective medium. Fusarium colonies were transferred to carnation leaf agar (CLA) and potato dextrose agar and later identified to species based on cultural and morphological characteristics. Of 1,230 Fusarium isolates identified, 50 were recognized as F. proliferatum based on morphological characteristics (3). F. proliferatum isolates produced abundant, aerial, white mycelium and a violet-to-dark purple pigmentation characteristic of Fusarium section Liseola. On CLA, microconidia were abundant, single celled, oval, and in chains on monophialides and polyphialides (3). Species identity was confirmed for two isolates by sequencing of the elongation factor (EF1-α) gene using the ef1 and ef2 primers (1). Identities of the resulting sequences (~680 bp) were confirmed by BLAST analysis and the FUSARIUM-ID database. Analysis resulted in a 99% match for five accessions of F. proliferatum (e.g., FD01389 and FD01858). To complete Koch's postulates, four F. proliferatum isolates were tested for pathogenicity on soybean in a greenhouse. Soybean seeds of cv. AG2306 were planted in cones (150 ml) in autoclaved soil infested with each isolate; Fusarium inoculum was applied by mixing an infested cornmeal/sand mix with soil prior to planting (4). Noninoculated control plants were grown in autoclaved soil amended with a sterile cornmeal/sand mix. Soil temperature was maintained at 18 ± 1°C by placing cones in water baths. The experiment was a completely randomized design with five replicates (single plant in a cone) per isolate and was repeated three times. Root rot severity (visually scored on a percentage scale), shoot dry weight, and root dry weight were assessed at the V3 soybean growth stage. All F. proliferatum isolates tested were pathogenic. Plants inoculated with these isolates were significantly different from the control plants in root rot severity (P = 0.001) and shoot (P = 0.023) and root (P = 0.013) dry weight. Infected plants showed dark brown lesions in the root system as well as decay of the entire taproot. F. proliferatum was reisolated from symptomatic root tissue of infected plants but not from similar tissues of control plants. To our knowledge, this is the first report of F. proliferatum causing root rot on soybean in the United States. References: (1) D. M. Geiser et al. Eur. J. Plant Pathol. 110:473, 2004. (2) G. L. Hartman et al. Compendium of Soybean Diseases. 4th ed. The American Phytopathologic Society, St. Paul, MN, 1999. (3) J. F. Leslie and B. A. Summerell. The Fusarium Laboratory Manual. Blackwell Publishing, Oxford, UK, 2006. (4) G. P. Munkvold and J. K. O'Mara. Plant Dis. 86:143, 2002.


Plant Disease ◽  
2021 ◽  
Author(s):  
Nathali López-Cardona ◽  
YUDY ALEJANDRA GUEVARA ◽  
Lederson Gañán-Betancur ◽  
Carol Viviana Amaya Gomez

In October 2018, soybean plants displaying elongated black to reddish-brown lesions on stems were observed in a field planted to the cv. BRS Serena in the locality of Puerto López (Meta, Colombia), with 20% incidence of diseased plants. Symptomatic stems were collected from five plants, and small pieces (∼5 mm2) were surface sterilized, plated on potato dextrose agar (PDA) and incubated for 2 weeks at 25°C in darkness. Three fungal isolates with similar morphology were obtained, i.e., by subculturing single hyphal tips, and their colonies on PDA were grayish-white, fluffy, with aerial mycelium, dark colored substrate mycelium, and produced circular black stroma. Pycnidia were globose, black, occurred as clusters, embedded in tissue, erumpent at maturity, with an elongated neck, and often had yellowish conidial cirrus extruding from the ostiole. Alpha conidia were observed for all isolates after 30 days growth on sterile soybean stem pieces (5 cm) on water agar, under 25ºC and 12 h light/12h darkness photoperiod. Alpha conidia (n = 50) measured 6.0 – 7.0 µm (6.4 ± 0.4 µm) × 2.0 – 3.0 µm (2.5± 0.4 µm), were aseptate, hyaline, smooth, ellipsoidal, often biguttulate, with subtruncate base. Beta conidia were not observed. Observed morphological characteristics of these isolates were similar to those reported in Diaporthe spp. by Udayanga et al. (2015). DNA from each fungal isolate was used to sequence the internal transcribed spacer region (ITS), and the translation elongation factor 1-α (TEF1) gene, using the primer pairs ITS5/ITS4 (White et al. 1990) and EF1-728F/EF1- 986R (Carbone & Kohn, 1999), respectively. Results from an NCBI-BLASTn, revealed that the ITS sequences of the three isolates (GenBank accessions MW566593 to MW566595) had 98% (581/584 bp) identity with D. miriciae strain BRIP 54736j (NR_147535.1), whereas the TEF1 sequences (GenBank accessions MW597410 to MW597412) had 97 to 100% (330-339/339 bp) identity with D. ueckerae strain FAU656 (KJ590747). The species Diaporthe miriciae R.G. Shivas, S.M. Thomps. & Y.P. Tan, and Diaporthe ueckerae Udayanga & Castl. are synonymous, with the latter taking the nomenclature priority (Gao et al. 2016). According to a multilocus phylogenetic analysis, by maximum likelihood, the three isolates clustered together in a clade with reference type strains of D. ueckerae (Udayanga et al. 2015). Soybean plants cv. BRS Serena (growth stages V3 to V4) were used to verify the pathogenicity of each isolate using a toothpick inoculation method (Mena et al. 2020). A single toothpick colonized by D. ueckerae was inserted directly into the stem of each plant (10 plants per isolate) approximately 1 cm below the first trifoliate node. Noncolonized sterile toothpicks, inserted in 10 soybean plants served as the non-inoculated control. Plants were arbitrarily distributed inside a glasshouse, and incubated at high relative humidity (>90% HR). After 15 days, inoculated plants showed elongated reddish-brown necrosis at the inoculated sites, that were similar to symptoms observed in the field. Non-inoculated control plants were asymptomatic. Fungal cultures recovered from symptomatic stems were morphologically identical to the original isolates. This is the first report of soybean stem canker caused by D. ueckerae in Colombia. Due to the economic importance of this disease elsewhere (Backman et al. 1985; Mena et al. 2020), further research on disease management strategies to mitigate potential crop losses is warranted.


Plant Disease ◽  
2008 ◽  
Vol 92 (10) ◽  
pp. 1394-1399 ◽  
Author(s):  
Warren E. Copes ◽  
Katherine L. Stevenson

A pictorial key was developed and the relationship between disease severity (S) and incidence (I) was examined to aid in the assessment of black root rot of pansy caused by Thielaviopsis basicola. The key consisted of photographs of root segments that represented nine disease severity levels ranging from 1 to 91%. Pansies that had received different fertility treatments, as part of seven separate experiments, were inoculated with T. basicola. Four weeks after inoculation, roots were washed, and incidence and severity of black root rot were visually assessed using a grid-line-intersect method. Disease incidence ranged from 1.3 to 100%, and severity ranged from 0.1 to 21.4% per plant. Four different mathematical models were compared to quantitatively describe the I-S relationship for the combined data from all seven experiments. Although all models provided an adequate fit, the model that is analogous to the Kono-Sugino equation provided the most reliable estimate of severity over the entire range of disease incidence values. The predictive ability and accuracy of this model across data sets was verified by jackknife and cross-validation techniques. We concluded that incidence of black root rot in pansy can be assessed more objectively and with greater precision than disease severity and can be used to provide reliable estimates of disease severity based on derived regression equations that quantify the I-S relationship for black root rot.


1993 ◽  
Vol 42 (5) ◽  
pp. 820-823 ◽  
Author(s):  
L. BØDKER ◽  
N. LEROUL ◽  
V. SMEDEGAARD-PETERSEN

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