scholarly journals Three new Cenomanian conifers from El Chango (Chiapas, Mexico) offer a snapshot of the geographic mosaic of the Mesozoic conifer decline

2021 ◽  
Author(s):  
Ixchel Gonzalez-Ramirez ◽  
Sergio RS Cevallos-Ferriz ◽  
Carl Rothfels
Keyword(s):  
Evolutionary History ◽  
Mixed Forest ◽  
Freshwater Ecosystems ◽  
Total Evidence ◽  
Morphological Data ◽  
Phylogenetic Position ◽  
Dominant Group ◽  
Geographic Mosaic ◽  
History Of ◽  
Rare Opportunity

Premise of study: El Chango is a recently discovered quarry that contains extremely well preserved fossils. The Cenomanian age of the locality corresponds to a time when the global flora was transitioning from gymnosperm- to angiosperm-dominated, yet conifers predominate in this locality. These fossils thus provide a rare opportunity to understand the replacement of conifers by angiosperms as the dominant group of plants. Methods: We collected material from El Chango in annual expeditions (2010 to 2014). We selected the three most abundant and best preserved conifer morphotypes and conducted a total-evidence (i.e., including molecular and morphological data) phylogenetic analysis of a sample of 72 extant conifer species plus the three fossils. We use these results to inform our taxonomic decisions. Results: We obtained four equally most-parsimonious trees (consistency index = 44.1%, retention index = 78.8%). Despite ambiguous relationships among some extant taxa, the three fossil conifers had the same phylogenetic position in all four most parsimonious trees; we describe these species as new: Sequoiadendron helicalancifolium sp. nov. (Cupressaceae), and Microcachrys rhomboidea sp. nov. and Dacrydium bifoliosus sp. nov (Podocarpaceae). The ecosystem is interpreted as a coastal humid mixed forest. Conclusions: Our findings contribute to the understanding of Cenomanian equatorialregions, and support the hypothesis of a geographically and ecologically structured rise of angiosperms, with conifers remaining dominant in brackish-water and angiosperms becoming dominant in freshwater-ecosystems. These fossils fill in gaps in the evolutionary history of lineages like Microcachrys, which we demonstrate occurred in the Northern hemisphere before becoming restricted to its current range (Tasmania).

scholarly journals Total-Evidence Framework Reveals Complex Morphological Evolution in Nightbirds (Strisores)

Diversity ◽  
2019 ◽  
Vol 11 (9) ◽  
pp. 143 ◽  
Author(s):  
Albert Chen ◽  
Noor D. White ◽  
Roger B.J. Benson ◽  
Michael J. Braun ◽  
Daniel J. Field
Keyword(s):  
Evolutionary History ◽  
Large Scale ◽  
Sequence Data ◽  
Morphological Evolution ◽  
Phylogenetic Analyses ◽  
Total Evidence ◽  
Morphological Data ◽  
Phylogenetic Position ◽  
Anatomical Data ◽  
Evidence Framework

Strisores is a clade of neoavian birds that include diurnal aerial specialists such as swifts and hummingbirds, as well as several predominantly nocturnal lineages such as nightjars and potoos. Despite the use of genome-scale molecular datasets, the phylogenetic interrelationships among major strisorean groups remain controversial. Given the availability of next-generation sequence data for Strisores and the clade’s rich fossil record, we reassessed the phylogeny of Strisores by incorporating a large-scale sequence dataset with anatomical data from living and fossil strisoreans within a Bayesian total-evidence framework. Combined analyses of molecular and morphological data resulted in a phylogenetic topology for Strisores that is congruent with the findings of two recent molecular phylogenomic studies, supporting nightjars (Caprimulgidae) as the extant sister group of the remainder of Strisores. This total-evidence framework allowed us to identify morphological synapomorphies for strisorean clades previously recovered using molecular-only datasets. However, a combined analysis of molecular and morphological data highlighted strong signal conflict between sequence and anatomical data in Strisores. Furthermore, simultaneous analysis of molecular and morphological data recovered differing placements for some fossil taxa compared with analyses of morphological data under a molecular scaffold, highlighting the importance of analytical decisions when conducting morphological phylogenetic analyses of taxa with molecular phylogenetic data. We suggest that multiple strisorean lineages have experienced convergent evolution across the skeleton, obfuscating the phylogenetic position of certain fossils, and that many distinctive specializations of strisorean subclades were acquired early in their evolutionary history. Despite this apparent complexity in the evolutionary history of Strisores, our results provide fossil support for aerial foraging as the ancestral ecological strategy of Strisores, as implied by recent phylogenetic topologies derived from molecular data.

scholarly journals Nephromyces represents a diverse and novel lineage of the Apicomplexa that has retained apicoplasts

2019 ◽  
Author(s):  
Sergio A Muñoz-Gómez ◽  
Keira Durnin ◽  
Laura Eme ◽  
Christopher Paight ◽  
Christopher E Lane ◽  
...  
Keyword(s):  
Life Style ◽  
Metabolic Pathways ◽  
Evolutionary History ◽  
Phylogenetic Analyses ◽  
Phylogenetic Position ◽  
Biosynthetic Pathways ◽  
History Of ◽  
Sea Squirts ◽  
Shed Light ◽  
Apicoplast Genome

Abstract A most interesting exception within the parasitic Apicomplexa is Nephromyces, an extracellular, probably mutualistic, endosymbiont found living inside molgulid ascidian tunicates (i.e., sea squirts). Even though Nephromyces is now known to be an apicomplexan, many other questions about its nature remain unanswered. To gain further insights into the biology and evolutionary history of this unusual apicomplexan, we aimed to (1) find the precise phylogenetic position of Nephromyces within the Apicomplexa, (2) search for the apicoplast genome of Nephromyces, and (3) infer the major metabolic pathways in the apicoplast of Nephromyces. To do this, we sequenced a metagenome and a metatranscriptome from the molgulid renal sac, the specialized habitat where Nephromyces thrives. Our phylogenetic analyses of conserved nucleus-encoded genes robustly suggest that Nephromyces is a novel lineage sister to the Hematozoa, which comprises both the Haemosporidia (e.g., Plasmodium) and the Piroplasmida (e.g., Babesia and Theileria). Furthermore, a survey of the renal sac metagenome revealed 13 small contigs that closely resemble the genomes of the non-photosynthetic reduced plastids, or apicoplasts, of other apicomplexans. We show that these apicoplast genomes correspond to a diverse set of most closely related but genetically divergent Nephromyces lineages that co-inhabit a single tunicate host. In addition, the apicoplast of Nephromyces appears to have retained all biosynthetic pathways inferred to have been ancestral to parasitic apicomplexans. Our results shed light on the evolutionary history of the only probably mutualistic apicomplexan known, Nephromyces, and provide context for a better understanding of its life style and intricate symbiosis.

scholarly journals The evolutionary history of holometabolous insects inferred from transcriptome-based phylogeny and comprehensive morphological data

2014 ◽  
Vol 14 (1) ◽  
pp. 52 ◽  
Author(s):  
Ralph S Peters ◽  
Karen Meusemann ◽  
Malte Petersen ◽  
Christoph Mayer ◽  
Jeanne Wilbrandt ◽  
...  
Keyword(s):  
Evolutionary History ◽  
Morphological Data ◽  
History Of

Phylogenetic position and evolutionary history of the turtle and whale barnacles (Cirripedia: Balanomorpha: Coronuloidea)

2013 ◽  
Vol 67 (1) ◽  
pp. 9-14 ◽  
Author(s):  
Ryota Hayashi ◽  
Benny K.K. Chan ◽  
Noa Simon-Blecher ◽  
Hiromi Watanabe ◽  
Tamar Guy-Haim ◽  
...  
Keyword(s):  
Evolutionary History ◽  
Phylogenetic Position ◽  
History Of

Notes on the generic position of Brassica deserti (Brassicaceae)

2019 ◽  
Vol 66 (1-2) ◽  
pp. 89-93
Author(s):  
Jotham Ziffer-Berger ◽  
Alexandra Keren-Keiserman ◽  
Adi Doron-Faigenboim ◽  
Klaus Mummenhoff ◽  
Oz Barazani
Keyword(s):  
Mediterranean Area ◽  
Morphological Data ◽  
Phylogenetic Position ◽  
Molecular Tools ◽  
East Mediterranean ◽  
Phylogenetic Groups ◽  
5.8S Rdna ◽  
The Core ◽  
Generic Position ◽  
History Of

Molecular tools provide new insights into phylogenetic relationships of plant species, and by relating phylogenetic groups to their geographical distribution, we can cast light upon the evolution history of plant clades. In the current study, we evaluated the phylogenetic position of the Sinai endemic Brassica deserti (Brassicaceae), later renamed as Erucastrum deserti, based on morphological data and 5.8S rDNA and ITS (Internal Transcribed Spacer) regions. Our results indicate that B. deserti belongs to an East-Mediterranean – Saharo Arabian clade and was not assigned to the core Brassica and Erucastrum clades, respectively, which evolved in the West Mediterranean area. We tentatively conclude that Brassica deserti evolved independently of core Brassica and Erucastrum.

A total evidence approach using palynological characters to infer the complex evolutionary history of the Asian Impatiens (Balsaminaceae)

Taxon ◽  
2012 ◽  
Vol 61 (2) ◽  
pp. 355-367 ◽  
Author(s):  
Steven B. Janssens ◽  
Yi Song Wilson ◽  
Yong-Ming Yuan ◽  
Anne Nagels ◽  
Erik F. Smets ◽  
...  
Keyword(s):  
Evolutionary History ◽  
Total Evidence ◽  
History Of ◽  
Complex Evolutionary History

scholarly journals Origin of raptorial feeding in juvenile euarthropods revealed by a Cambrian radiodontan

2018 ◽  
Vol 5 (6) ◽  
pp. 863-869 ◽  
Author(s):  
Jianni Liu ◽  
Rudy Lerosey-Aubril ◽  
Michael Steiner ◽  
Jason A Dunlop ◽  
Degan Shu ◽  
...  
Keyword(s):  
Evolutionary History ◽  
Feeding Habits ◽  
Phylogenetic Position ◽  
Early Developmental Stage ◽  
Rapid Rise ◽  
Juvenile Instar ◽  
History Of ◽  
Dietary Ecology ◽  
Chengjiang Biota ◽  
Early Developmental

Abstract The rapid rise of arthropods during the Cambrian quickly established some clades, such as the euarthropod stem-group called Radiodonta, as the dominant and most diverse predators in marine ecosystems. Recent discoveries have shown that the size and dietary ecology of radiodontans are far more diverse than previously thought, but little is known about the feeding habits of juveniles. Here, we document a very small (∼18-mm-long), near-complete specimen of the radiodontan Lyrarapax unguispinus from the early Cambrian Chengjiang Biota of China. This specimen is the smallest radiodontan individual known, representing a juvenile instar. Its adult-like morphology—especially the fully developed spinose frontal appendages and tetraradial oral cone—indicates that L. unguispinus was a well-equipped predator at an early developmental stage, similar to modern raptorial euarthropods, such as mantises, mantis shrimps and arachnids. This evidence, coupled with the basal phylogenetic position of radiodontans, confirms that raptorial feeding habits in juvenile euarthropods appeared early in the evolutionary history of the group.

The amphibamiform Nanobamus macrorhinus from the early Permian of Texas

2019 ◽  
Vol 94 (2) ◽  
pp. 366-377 ◽  
Author(s):  
Bryan M. Gee ◽  
Robert R. Reisz
Keyword(s):  
Phylogenetic Analysis ◽  
Evolutionary History ◽  
Phylogenetic Position ◽  
Early Permian ◽  
Larval Form ◽  
Terrestrial Environments ◽  
History Of ◽  
Insight Into

AbstractNanobamus macrorhinus Schoch and Milner, 2014 is a small amphibamiform temnospondyl from the early Permian Arroyo Formation of Texas. It is most readily characterized by an elongate and partially subdivided naris. This condition is superficially reminiscent of that seen in the coeval trematopids, the group to which N. macrorhinus was originally referred to under an interpretation of the holotype as a larval form. This was discounted by later workers, but the amphibamiform affinities of the specimen were not formalized until recently. The specimen has never been described in the context of its amphibamiform affinities and remains poorly characterized, never having been sampled in a phylogenetic analysis. Here we present a complete, updated osteological description of N. macrorhinus, including an improved characterization of its unique mosaic of plesiomorphic and apomorphic features and clarification of the taxon's autapomorphies. Our analysis of the taxon's phylogenetic position within Amphibamiformes shows that N. macrorhinus was recovered as diverging after basal amphibamiforms, e.g., the micropholids, and before derived amphibamiforms, e.g., the amphibamids. This is supported by the unique mixture of retained plesiomorphies, e.g., nonforeshortened postparietals and an oval choana, and apomorphies, e.g., a narrow interorbital region and slender palatal rami of the pterygoid. These results reflect the complexity of terrestrial amphibamiform diversity and provide further insight into the evolutionary history of the lissamphibian stem in terrestrial environments.

scholarly journals The palate and choanae structure of the cf. Susisuchus (Crocodyliformes, Eusuchia): phylogenetic implications

2018 ◽  
Author(s):  
Karla J Leite ◽  
Daniel C Fortier
Keyword(s):  
Lower Cretaceous ◽  
Evolutionary History ◽  
Ventral View ◽  
Sister Group ◽  
Phylogenetic Position ◽  
Phylogenetic Implications ◽  
History Of

Crocodyliformes have undergone few modifications in their morphology since they have emerged. The change in the position of the choana was important during the evolutionary history of this group. Such character is relevant in the phylogenetic position of many crocodyliforms. The Susisuchidae clade has been placed in different phylogenetic positions: as a sister group of Eusuchia, advanced Neosuchia and in Eusuchia. In Isisfordia there are reports that the choana of this taxon is or not fully enclosed by pterygoid. A new skull of cf. Susisuchus from the Crato Formation of the Santana Group (Lower Cretaceous) is described and we recover Susisuchidae in a new phylogenetic position within Eusuchia. The preservation in the ventral view of FPH-243-V allows character encoding not yet observed for the species. The new specimen shows a typical eusuchian palate for Susisuchus, in which the choana is fully enclosed by the pterygoid. The encoding of the ventral characters of Susisuchus places Susisuchidae in Eusuchia. However, this position must be further studied, since the matrices showed fragility in the reconstitution of the Neosuchia-Eusuchia transition.

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