Significance-Based Essential Protein Discovery

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2020.3004364 ◽

2020 ◽

pp. 1-1

Author(s):

Yan Liu ◽

Hao Liang ◽

Quan Zou ◽

Zengyou He

Keyword(s):

Essential Protein ◽

Protein Discovery

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Essential Protein Discovery Based on Network Motif and Gene Ontology

2011 IEEE International Conference on Bioinformatics and Biomedicine ◽

10.1109/bibm.2011.46 ◽

2011 ◽

Author(s):

Wooyoung Kim ◽

Min Li ◽

Jianxin Wang ◽

Yi Pan

Keyword(s):

Gene Ontology ◽

Network Motif ◽

Essential Protein ◽

Protein Discovery

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NetEPD: A network-based essential protein discovery platform

Tsinghua Science & Technology ◽

10.26599/tst.2019.9010056 ◽

2020 ◽

Vol 25 (4) ◽

pp. 542-552 ◽

Author(s):

Jiashuai Zhang ◽

Wenkai Li ◽

Min Zeng ◽

Xiangmao Meng ◽

Lukasz Kurgan ◽

...

Keyword(s):

Essential Protein ◽

Protein Discovery

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Essential protein discovery based on network node correlation and invalidating protein node

2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) ◽

10.1109/bibm.2015.7359842 ◽

2015 ◽

Author(s):

Wenjie Hu ◽

Xianjun Shen ◽

Rui Xu

Keyword(s):

Network Node ◽

Essential Protein ◽

Protein Discovery

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Essential protein discovery based on a combination of modularity and conservatism

Methods ◽

10.1016/j.ymeth.2016.07.005 ◽

2016 ◽

Vol 110 ◽

pp. 54-63 ◽

Author(s):

Bihai Zhao ◽

Jianxin Wang ◽

Xueyong Li ◽

Fang-Xiang Wu

Keyword(s):

Essential Protein ◽

Protein Discovery

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A new essential protein discovery method based on the integration of protein-protein interaction and gene expression data

BMC Systems Biology ◽

10.1186/1752-0509-6-15 ◽

2012 ◽

Vol 6 (1) ◽

pp. 15 ◽

Author(s):

Min Li ◽

Hanhui Zhang ◽

Jian-xin Wang ◽

Yi Pan

Keyword(s):

Gene Expression ◽

Gene Expression Data ◽

Protein Interaction ◽

Expression Data ◽

Essential Protein ◽

Protein Protein Interaction ◽

Protein Discovery ◽

Discovery Method

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A novel scheme for essential protein discovery based on multi-source biological information

Journal of Theoretical Biology ◽

10.1016/j.jtbi.2020.110414 ◽

2020 ◽

Vol 504 ◽

pp. 110414

Author(s):

Wei Liu ◽

Liangyu Ma ◽

Ling Chen ◽

Bolun Chen ◽

Byeungwoo Jeon ◽

...

Keyword(s):

Biological Information ◽

Essential Protein ◽

Protein Discovery

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Nob1p, a new essential protein, associates with the 26S proteasome of growing Saccharomyces cerevisiae cells

Gene ◽

10.1016/s0378-1119(99)00566-1 ◽

2000 ◽

Vol 243 (1-2) ◽

pp. 37-45 ◽

Author(s):

Yoshiko Tone ◽

Nobuyuki Tanahashi ◽

Keiji Tanaka ◽

Masahiro Fujimuro ◽

Hideyoshi Yokosawa ◽

...

Keyword(s):

Saccharomyces Cerevisiae ◽

26S Proteasome ◽

Essential Protein

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Negative control of Candida albicans filamentation-associated gene expression by essential protein kinase gene KIN28

Current Genetics ◽

10.1007/s00294-017-0705-8 ◽

2017 ◽

Vol 63 (6) ◽

pp. 1073-1079 ◽

Author(s):

C. A. Woolford ◽

K. Lagree ◽

T. Aleynikov ◽

A. P. Mitchell

Keyword(s):

Gene Expression ◽

Candida Albicans ◽

Protein Kinase ◽

Negative Control ◽

Kinase Gene ◽

Essential Protein ◽

Protein Kinase Gene

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RPL29 codes for a non-essential protein of the 60S ribosomal subunit in Saccharomyces cerevisiae and exhibits synthetic lethality with mutations in genes for proteins required for subunit coupling

Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression ◽

10.1016/s0167-4781(01)00372-4 ◽

2002 ◽

Vol 1574 (3) ◽

pp. 255-261 ◽

Author(s):

Marie Laure DeLabre ◽

Jacques Kessl ◽

Spyridoula Karamanou ◽

Bernard L. Trumpower

Keyword(s):

Saccharomyces Cerevisiae ◽

Synthetic Lethality ◽

Ribosomal Subunit ◽

Essential Protein

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Ortho_Sim_Loc: Essential protein prediction using Orthology and Priority-Based Similarity Approach

Computational Biology and Chemistry ◽

10.1016/j.compbiolchem.2021.107503 ◽

2021 ◽

pp. 107503

Author(s):

Anjan Kumar Payra ◽

Banani Saha ◽

Anupam Ghosh

Keyword(s):

Essential Protein ◽

Protein Prediction

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