First report of a begomovirus associated with leaf curl disease of bell pepper in Pakistan

During December 2003, severe leaf yellowing, leaf curling, and stunting symptoms were observed in tomato (Lycopersicon esculentum) plantings in Melkassa (1,550 m above sea level), Ethiopia. Eleven symptomatic samples were collected and tested for the presence of a begomovirus using polymerase chain reaction (PCR) with the begomovirus-specific degenerate primer pair PAL1v1978/PAR1c715 (3). Samples were also tested for Cucumber mosaic virus (CMV), Potato virus Y (PVY), Tobacco etch virus (TEV), Pepper veinal mottle virus (PVMV), and Tomato mosaic virus (ToMV) using enzyme-linked immunosorbent assay (ELISA). All samples were negative for CMV, PVY, TEV, PVMV, and ToMV. However, the expected 1.4-kb PCR product for begomoviruses was obtained from all samples. DNA-B and DNA-beta were not detectable using PCR with the DNA-B specific primer pairs DNABLC1/DNABLV2 and DNABLC2/ DNABLV2 (2) and the DNA-beta primer pair Beta01/Beta02 (1), respectively. The 1.4-kb PCR product of one sample was cloned and sequenced. On the basis of the sequence of the 1.4-kb DNA product, specific primers were designed to complete the DNA-A sequence. The DNA-A consisted of 2,785 nucleotides (GenBank Accession No. DQ358913) and was found to contain the six predicted open reading frames (ORFs V1, V2, C1, C2, C3, and C4). A BLAST analysis was conducted with geminivirus sequences available in the GenBank database at the National Center for Biotechnology Information (Bethesda, MD), and DNAMAN software (Lynnon Corporation, Quebec, Canada) was used for further comparisons. The DNA-A sequence of the virus associated with yellow leaf curl disease of tomato from Ethiopia showed highest sequence identity (92%) with Tomato yellow leaf curl Mali virus (TYLCMLV; GenBank Accession No. AY502934). On the basis of the DNA-A sequence comparison and the ICTV demarcation of species at 89% sequence identity, the Ethiopian virus is a provisional strain of TYLCMLV described from Mali. To our knowledge, this is the first report of a begomovirus associated with tomato yellow leaf curl disease in Ethiopia. References: (1) R. W. Briddon et al. Mol. Biotechnol. 20:315, 2002. (2) S. K. Green et al. Plant Dis. 85:1286, 2001. (3) M. R. Rojas et al. Plant Dis. 77:340, 1993.

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First Report of a Croton yellow vein mosaic virus (CYVMV) Associated with Tomato Leaf Curl Disease in India

Journal of Phytopathology ◽

10.1111/jph.12319 ◽

2014 ◽

Vol 163 (9) ◽

pp. 777-779 ◽

Cited By ~ 5

Author(s):

Mohammad Sajid Khan ◽

Ajay Kumar Tiwari ◽

Sang Hye Ji ◽

Se Chul Chun

Keyword(s):

Mosaic Virus ◽

Tomato Leaf ◽

Yellow Vein ◽

First Report ◽

Tomato Leaf Curl Disease ◽

Yellow Vein Mosaic Virus ◽

Tomato Leaf Curl ◽

Leaf Curl Disease ◽

Leaf Curl

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First Report of Association of a Begomovirus with the Leaf Curl Disease of a Common Weed, Datura Inoxia

Indian Journal of Virology ◽

10.1007/s13337-012-0064-5 ◽

2012 ◽

Vol 23 (1) ◽

pp. 83-84 ◽

Cited By ~ 12

Author(s):

A. Marwal ◽

A. Sahu ◽

R. Prajapat ◽

D. K. Choudhary ◽

R. K. Gaur

Keyword(s):

First Report ◽

Leaf Curl Disease ◽

Datura Inoxia ◽

Leaf Curl

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First Report of Papaya Leaf Curl Disease in Pakistan

Plant Disease ◽

10.1094/pdis.1997.81.11.1333b ◽

1997 ◽

Vol 81 (11) ◽

pp. 1333-1333 ◽

Cited By ~ 10

Author(s):

A. Nadeem ◽

T. Mehmood ◽

M. Tahir ◽

S. Khalid ◽

Z. Xiong

Keyword(s):

Nucleic Acids ◽

Virus Disease ◽

Enzyme Linked Immunosorbent Assay ◽

Cotton Leaf ◽

First Report ◽

Cotton Leaf Curl Virus ◽

Dna Fragment ◽

Leaf Curl Virus ◽

Leaf Curl Disease ◽

Leaf Curl

Papaya plants with virus-disease-like symptoms were observed in back yards and commercial groves in Multan, Pakistan. Leaves of the diseased plants displayed downward curling and thickened, dark green veins. Leaf-like enations grew from the base of the diseased leaves. These symptoms are similar to those of cotton leaf curl disease. In addition, diseased papayas were stunted and distorted. Leaf extracts from 3 diseased and 2 healthy papayas were tested in enzyme-linked immunosorbent assay against antibodies to geminiviruses. SCRI-52 and SCRI-60, two monoclonal antibodies to Indian cassava mosaic virus (2), reacted positively (more than 7× healthy background) with the diseased samples but not with the healthy ones. Total nucleic acids from the papaya samples were used as templates in polymerase chain reaction with primers F500 and R1800 (1), which are capable of amplifying a region of DNA A component of the whitefly-transmitted geminiviruses. A DNA fragment of approximately 1.4 kb was amplified from the nucleic acids of the diseased but not the healthy papayas. Under high stringency conditions (1), cloned DNA A fragments of both cotton leaf curl virus and cotton leaf crumple virus cross-hybridized with the amplified DNA fragment, but the hybridization signals were much weaker than those of the homologous hybridization. This is the first report of the papaya leaf curl disease in Pakistan. These data demonstrated that a geminivirus may be the causative agent of this papaya disease. We are currently determining the relationship between the geminivirus infecting papaya and cotton leaf curl virus. References: (1) A. Nadeem et al. Mol. Plant Pathol. (On-line: /1997/0612nadeem). (2) M. M. Swanson et al. Ann. Appl. Biol. 211:285, 1992.

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First Report of Tomato yellow leaf curl virus Associated with Tomato Yellow Leaf Curl Disease in California

Plant Disease ◽

10.1094/pdis-91-8-1056a ◽

2007 ◽

Vol 91 (8) ◽

pp. 1056-1056 ◽

Cited By ~ 23

Author(s):

M. R. Rojas ◽

T. Kon ◽

E. T. Natwick ◽

J. E. Polston ◽

F. Akad ◽

...

Keyword(s):

Sequence Analysis ◽

Tomato Yellow Leaf ◽

Tomato Leaf ◽

Homologous Sequence ◽

Yellow Leaf ◽

First Report ◽

Bona Fide ◽

Leaf Curl Virus ◽

Leaf Curl Disease ◽

Leaf Curl

Tomato yellow leaf curl disease caused by the whitefly-transmitted begomovirus (genus Begomovirus, family Geminiviridae) Tomato yellow leaf curl virus (TYLCV) is one of the most damaging diseases of tomato. TYLCV was introduced into the New World in the early 1990s and by the late 1990s, it was found in Florida (2). In 2005 and 2006, the virus was reported from northern Mexico (states of Sinaloa and Tamaulipas) (1) and subsequently from Texas and Arizona. In March 2007, tomato (Lycopersicon esculentum) plants growing in a greenhouse in Brawley, CA showed TYLCV-like symptoms including stunted upright growth, shortened internodes, and small upcurled leaves with crumpling and strong interveinal and marginal chlorosis. These plants also sustained high populations of whiteflies. Symptomatic tomato leaves and associated whiteflies were collected from inside the greenhouse. Leaf samples also were collected from symptomless weeds (cheeseweed [Malva parviflora] and dandelion [Taraxacum officinale]) outside of the greenhouse. Total nucleic acids were extracted from 41 symptomatic tomato leaf samples, seven samples of adult whiteflies (approximately 50 per sample), and six leaf samples each from cheeseweed and dandelion. PCR analyses were performed with the degenerate begomovirus primers PAL1v1978 and PAR1c496 (3) and a TYLCV capsid protein (CP) primer pair (4). The expected size of approximately 1.4-kbp and 300-bp DNA fragments, respectively, were amplified from extracts of all 41 symptomatic tomato leaves and adult whitefly samples; whereas the 300-bp DNA fragment was amplified from all six cheeseweed samples and four of the six dandelion samples. Sequence analysis of a portion of the AC1/C1 gene from the approximately 1.4-kbp fragment amplified from 12 tomato leaf samples and four whiteflies samples revealed 99 to 100% identity with the homologous sequence of TYLCV from Israel (GenBank Accession No. X15656). The putative genome of the California TYLCV isolate was amplified using PCR and an overlapping primer pair (TYBamHIv: 5′-GGATCCACTTCTAAATGAATTTCCTG-3′ and TYBamHI2c: 5′-GGATCCCACATAGTGCAAGACAAAC-3′), cloned and sequenced. The viral genome was 2,781 nt (GenBank Accession No. EF539831), and sequence analysis confirmed it was a bona fide isolate of TYLCV. The California TYLCV sequence is virtually identical (99.7% total nucleotide and 100% CP amino acid sequence identity) to a TYLCV isolate from Sinaloa, Mexico (GenBank Accession No. EF523478) and closely related to isolates from China (AM282874), Cuba (AJ223505), Dominican Republic (AF024715), Egypt (AY594174), Florida (AY530931), Japan (AB192966), and Mexico (DQ631892) (sequence identities of 98.2 to 99.7%). Together, these results establish that TYLCV was introduced to California, probably from Mexico. Because the tomatoes in this greenhouse were grown from seed, and symptoms did not appear until after initial fruit set, the virus was probably introduced via viruliferous whiteflies. To our knowledge, this is the first report of TYLCV infecting tomato plants in California. References: (1) J. K. Brown and A. M. Idris. Plant Dis. 90:1360, 2006. (2) J. E. Polston et al. Plant Dis. 83:984, 1999. (3) M. R. Rojas et al. Plant Dis. 77:340, 1993. (4) R. Salati et al. Phytopathology 92:487, 2002.

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First Detection of Cotton leaf curl Burewala virus and Cognate Cotton leaf curl Multan betasatellite and Gossypium darwinii symptomless alphasatellite in Symptomatic Luffa cylindrica in Pakistan

Plant Disease ◽

10.1094/pdis-12-12-1159-pdn ◽

2013 ◽

Vol 97 (8) ◽

pp. 1122-1122 ◽

Cited By ~ 9

Author(s):

M. Zia-Ur-Rehman ◽

H.-W. Herrmann ◽

U. Hameed ◽

M. S. Haider ◽

J. K. Brown

Keyword(s):

Plasmid Vector ◽

Cotton Leaf ◽

Cotton Production ◽

Alpha Satellite ◽

Luffa Cylindrica ◽

First Report ◽

Cotton Leaf Curl Disease ◽

Total Dna ◽

Leaf Curl Disease ◽

Leaf Curl

Cotton leaf curl disease (CLCuD) is the major plant viral constraint to cotton production on the Indian subcontinent (2). CLCuD is primarily caused by begomovirus, Cotton leaf curl Burewala virus (CLCuBuV), and Cotton leaf curl Multan betasatellite (CLCuMB). During 2011 in Burewala, Pakistan, plants in a production field of Luffa cylindrica (Ghia tori) were infested with the whitefly Bemisia tabaci (Genn.), and ~60% of the plants exhibited leaf curling and stunting symptoms, reminiscent of those caused by begomoviruses (Geminiviridae). Total DNA was extracted from five different symptomatic leaf samples using the CTAB method (1), and extracts were analyzed by Southern blot hybridization. As a probe, we used a 1.1-kbp fragment of CLCuBuV and a positive signal was obtained from all five samples. Total DNA was used as template for rolling circle amplification (RCA) using the TempliPhi DNA Amplification Kit (GE Healthcare, Little Chalfont, United Kingdom). The amplified RCA products were digested with EcoRI, and the resulting ~2.7-kbp fragments from each isolate were directionally cloned into the EcoRI digested, pGEM-3Zf+ (Promega, Madison, WI) plasmid vector. PCR was used to amplify the prospective, associated betasatellite and alphasatellite molecules using the primers BetaF5′-GGTACCGCCGGAGCTTAGCWCKCC-3′ and BetaR5′-GGTACCGTAGCTAAGGCTGCTGCG-3′, and AlphaF5′-AAGCTTAGAGGAAACTAGGGTTTC-3′ and AlphaR5′-AAGCTTTTCATACARTARTCNCRDG-3′, respectively. The putative satellite amplicons, at ~1.4 kbp each were cloned in the plasmid vector pGEMT-Easy (Promega, Madison, WI) and sequenced. BLASTn comparisons of the apparently full-length begomoviral genomes, at 2,753 nt, against the NCBI database revealed that all five isolates were most closely related to CLCuBuV (FR750321). In addition, one each of beta- and alpha-satellite were amplified from all five samples at 1,393 and 1,378 bases, respectively. The beta- and alpha-satellites were most closely related to CLCuMB (HE985228) and the Gossypium darwinii symptomless alphasatellite (GDaSA) (FR877533), respectively. Pairwise sequence comparisons of the top 10 BLASTn hits using MEGA5 indicated that the helper begomovirus shared 99.9% identity with CLCuBuV (FR750321), the most prevalent helper virus currently associated with the leaf curl complex in Pakistan. Based on the ICTV demarcation for begomoviral species at <89%, it is considered a variant of CLCuBuV. The resultant beta- and alpha-satellite sequences were 98.1% and 97.8% identical to CLCuMB (HE985228) and GDaSA (FR877533), respectively, and are the most prevalent satellites associated with the CLCuD complex in Pakistan and India (2). To our knowledge, this is first report of the CLCuBuV-CLCuMB-GDaSA complex infecting a cucurbitaceous species, and the first report of L. cylindrica as a host of the CLCuD complex. This discovery of CLCuBuV and associated satellites in a cucurbitaceous host that is widely grown in Pakistan and India where this complex infects cotton indicates that the host range of CLCuBuV is broader than expected. This new information will aid in better understanding of cotton leaf curl disease epidemiology in the current epidemic areas. References: (1) J. J. Doyle and J. L. Doyle. Focus 12:13, 1990. (2) S. Mansoor et al. Trends Plant Sci. 11:209, 2006.

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