A comparison of four methods of calculating standard errors of maximum-likelihood estimates in the analysis of covariance structure

Author(s):  
Conor V. Dolan ◽  
Peter C. M. Molenaar
2021 ◽  
Author(s):  
Mohammed Sultan ◽  
Ritbano Ahmed Abdo

Abstract Background: The linear mixed model is one of the common models used to analyze the longitudinal data; it may comprise of Separate (Univariate), joint Bivariate or joint multivariate linear mixed model, which is predicated on the number of response variables incorporated in the analysis. Adjusting for correlation matrix and covariance matrix between and within subjects is one reason why modern longitudinal data analysis techniques are deemed more appropriate than some of the previous methods of analysis. Some studies assume that the correlation between observations is zero. However, it is unlikely that repeated measurements on the same individual will actually be independent. To that end, comparing the different linear mixed models and identifying the appropriate model demonstrates the evolution of patients with CHF.Methods: In this study the separate, bivariate and multivariate linear mixed models were analyzed with different covariance and correlation structures. The parameters in the models were estimated by maximum likelihood estimation and restricted maximum likelihood estimation techniques. The models were compared by AIC, BIC, and Log-likelihood ratio test. Results: The models with unstructured covariance structure for random effects and autoregressive order one for serial correlation structure had small AIC, BIC and -2LL and standard errors. Separate models had high AIC, BIC and -2LL and standard errors than bivariate and multivariate had small AIC, BIC and -2LL and standard errors than all models. Conclusions: Finally, a multivariate linear mixed model with autoregressive order one correlation structure and unstructured covariance structure for random effects, to consider within and between patients’ variations, was considered as the best model to depict the evolution of patients with congestive heart failure.


Genetics ◽  
2001 ◽  
Vol 159 (4) ◽  
pp. 1779-1788 ◽  
Author(s):  
Carlos D Bustamante ◽  
John Wakeley ◽  
Stanley Sawyer ◽  
Daniel L Hartl

Abstract In this article we explore statistical properties of the maximum-likelihood estimates (MLEs) of the selection and mutation parameters in a Poisson random field population genetics model of directional selection at DNA sites. We derive the asymptotic variances and covariance of the MLEs and explore the power of the likelihood ratio tests (LRT) of neutrality for varying levels of mutation and selection as well as the robustness of the LRT to deviations from the assumption of free recombination among sites. We also discuss the coverage of confidence intervals on the basis of two standard-likelihood methods. We find that the LRT has high power to detect deviations from neutrality and that the maximum-likelihood estimation performs very well when the ancestral states of all mutations in the sample are known. When the ancestral states are not known, the test has high power to detect deviations from neutrality for negative selection but not for positive selection. We also find that the LRT is not robust to deviations from the assumption of independence among sites.


Genetics ◽  
2000 ◽  
Vol 155 (3) ◽  
pp. 1429-1437
Author(s):  
Oliver G Pybus ◽  
Andrew Rambaut ◽  
Paul H Harvey

Abstract We describe a unified set of methods for the inference of demographic history using genealogies reconstructed from gene sequence data. We introduce the skyline plot, a graphical, nonparametric estimate of demographic history. We discuss both maximum-likelihood parameter estimation and demographic hypothesis testing. Simulations are carried out to investigate the statistical properties of maximum-likelihood estimates of demographic parameters. The simulations reveal that (i) the performance of exponential growth model estimates is determined by a simple function of the true parameter values and (ii) under some conditions, estimates from reconstructed trees perform as well as estimates from perfect trees. We apply our methods to HIV-1 sequence data and find strong evidence that subtypes A and B have different demographic histories. We also provide the first (albeit tentative) genetic evidence for a recent decrease in the growth rate of subtype B.


Author(s):  
Vijitashwa Pandey ◽  
Deborah Thurston

Design for disassembly and reuse focuses on developing methods to minimize difficulty in disassembly for maintenance or reuse. These methods can gain substantially if the relationship between component attributes (material mix, ease of disassembly etc.) and their likelihood of reuse or disposal is understood. For products already in the marketplace, a feedback approach that evaluates willingness of manufacturers or customers (decision makers) to reuse a component can reveal how attributes of a component affect reuse decisions. This paper introduces some metrics and combines them with ones proposed in literature into a measure that captures the overall value of a decision made by the decision makers. The premise is that the decision makers would choose a decision that has the maximum value. Four decisions are considered regarding a component’s fate after recovery ranging from direct reuse to disposal. A method on the lines of discrete choice theory is utilized that uses maximum likelihood estimates to determine the parameters that define the value function. The maximum likelihood method can take inputs from actual decisions made by the decision makers to assess the value function. This function can be used to determine the likelihood that the component takes a certain path (one of the four decisions), taking as input its attributes, which can facilitate long range planning and also help determine ways reuse decisions can be influenced.


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