scholarly journals Draft Genome Sequence of Paenibacillus polymyxa DSM 292, a Gram-Positive, Spore-Forming Soil Bacterium with High Biotechnological Potential

2020 ◽  
Vol 9 (11) ◽  
Author(s):  
Simon Heinze ◽  
Ilias Lagkouvardos ◽  
Wolfgang Liebl ◽  
Wolfgang H. Schwarz ◽  
Petra Kornberger ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Protein Production ◽  
Heterologous Protein ◽  
Draft Genome ◽  
Paenibacillus Polymyxa ◽  
Illumina Miseq ◽  
Draft Genome Sequence ◽  
Biotechnological Potential ◽  
Content Type ◽  
Paired End Sequencing

Paenibacillus polymyxa DSM 292 was originally isolated from soil in 1947 due to its ability to produce antibiotics. The low proteolytic properties of strain DSM 292 warrant its examination as a host for heterologous protein production. Here, we report the draft genome sequence of DSM 292 as established by Illumina MiSeq paired-end sequencing.

scholarly journals Draft Genome Sequence of Probiotic Lactobacillus brevis TUCO-5E, Isolated from Porcine Milk

2018 ◽  
Vol 7 (19) ◽  
Author(s):  
Sandra Rayen Quilodran-Vega ◽  
Leonardo Albarracin ◽  
Elvira Maria Hebert ◽  
Lucila Saavedra ◽  
Alexis Fonseca ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Probiotic Strain ◽  
Lactobacillus Brevis ◽  
Illumina Miseq ◽  
Draft Genome Sequence ◽  
Maternal Milk ◽  
Content Type ◽  
Probiotic Lactobacillus ◽  
Porcine Milk

This report describes the draft genome sequence of Lactobacillus brevis TUCO-5E, a probiotic strain isolated from porcine maternal milk. The reads were generated by a whole-genome sequencing (WGS) strategy on an Illumina MiSeq sequencer and were assembled into contigs with a total estimated size of 2,461,089 bp.

scholarly journals Draft Genome Sequence of a New Zealand Isolate of Mycoplasma ovipneumoniae

2020 ◽  
Vol 9 (10) ◽  
Author(s):  
B. J. Bridgeman ◽  
S. K. Gupta ◽  
A. Murray ◽  
V. S. R. Dukkipati ◽  
E. Altermann ◽  
...  
Keyword(s):  
New Zealand ◽  
Genome Sequence ◽  
De Novo ◽  
Draft Genome ◽  
Illumina Miseq ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Mycoplasma Ovipneumoniae

The genome of New Zealand Mycoplasma ovipneumoniae isolate 90 was sequenced and assembled using an Illumina MiSeq system and combining the built-in Geneious de novo and Velvet de novo assemblers. The 1,031,345-bp-long genome harbored 711 genes with a coding percentage of 86.6.

scholarly journals Draft Genome Sequence of Mobilitalea sibirica Strain P3M-3T, the Sole Representative of the Genus Mobilitalea

2021 ◽  
Vol 10 (13) ◽  
Author(s):  
Nils Thieme ◽  
Regina Rettenmaier ◽  
Wolfgang Liebl ◽  
Vladimir V. Zverlov
Keyword(s):  
Carbon Source ◽  
Genome Sequence ◽  
Western Siberia ◽  
Draft Genome ◽  
Microbial Mat ◽  
Draft Genome Sequence ◽  
Strictly Anaerobic ◽  
Content Type ◽  
The Family ◽  
Paired End Sequencing

ABSTRACT Mobilitalea sibirica strain P3M-3T is a strictly anaerobic, halotolerant, organotrophic bacterium of the family Lachnospiraceae that can utilize various plant-derived polysaccharides as its carbon source. The strain was originally isolated from a microbial mat in western Siberia (Russia). In this study, we present the draft genome sequence of M. sibirica P3M-3T based on Illumina paired-end sequencing.

scholarly journals Draft Genome Sequence of Kroppenstedtia sanguinis X0209T, a Clinical Isolate Recovered from Human Blood

2019 ◽  
Vol 8 (24) ◽  
Author(s):  
Robert A. Arthur ◽  
Ainsley C. Nicholson ◽  
Ben W. Humrighouse ◽  
John R. McQuiston ◽  
Brent A. Lasker
Keyword(s):  
Clinical Isolate ◽  
Genome Sequence ◽  
Human Blood ◽  
Draft Genome ◽  
Gene Clusters ◽  
Illumina Miseq ◽  
Draft Genome Sequence ◽  
Biosynthetic Gene ◽  
Biosynthetic Gene Clusters ◽  
Content Type

Kroppenstedtia sanguinis X0209T, a thermoactinomycete, was isolated from the blood of a patient in Sweden. We report on the draft genome sequence obtained with an Illumina MiSeq instrument. The assembled genome totaled 3.73 Mb and encoded 3,583 proteins. Putative genes for virulence, transposons, and biosynthetic gene clusters have been identified.

scholarly journals Draft Genome Sequence of Plantibacter flavus Strain 251 Isolated from a Plant Growing in a Chronically Hydrocarbon-Contaminated Site

2017 ◽  
Vol 5 (17) ◽  
Author(s):  
Rhea Lumactud ◽  
Roberta Fulthorpe ◽  
Vladimir Sentchilo ◽  
Jan Roelof van der Meer
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Contaminated Site ◽  
Achillea Millefolium ◽  
Biotechnological Potential ◽  
Content Type ◽  
Natural Oil ◽  
Oil Seep ◽  
Natural Oil Seep

ABSTRACT Plantibacter flavus isolate 251 is a bacterial endophyte isolated from an Achillea millefolium plant growing in a natural oil seep soil located in Oil Springs, Ontario, Canada. We present here a draft genome sequence of an infrequently reported genus Plantibacter, highlighting an endophytic lifestyle and biotechnological potential.

scholarly journals Draft Genome Sequence of Paenibacillus polymyxa 3A-25AI, a Strain Antagonist to Root Rot Causal Phytopathogens

2020 ◽  
Vol 9 (7) ◽  
Author(s):  
Jazmín López-Martínez ◽  
Yumiko De La Cruz-Rodríguez ◽  
Alejandro Alvarado-Gutiérrez ◽  
Miguel Alvarado-Rodríguez ◽  
Julio Vega-Arreguín ◽  
...  
Keyword(s):  
Rhizoctonia Solani ◽  
Genome Size ◽  
Genome Sequence ◽  
Dna Sequences ◽  
Root Rot ◽  
Phytophthora Capsici ◽  
Draft Genome ◽  
Paenibacillus Polymyxa ◽  
Draft Genome Sequence ◽  
Content Type

Here, we report the draft genome sequence of the Paenibacillus polymyxa 3A-25AI strain, isolated from the rhizosphere of wild grass. This strain inhibits Phytophthora capsici and Rhizoctonia solani phytopathogens. The genome size is 5.6 Mb, with a G+C content of 45.59%, and contains 5,079 genes, 4,968 coding DNA sequences (CDSs), 35 tRNAs, 3 rRNAs, and 72 unexpected miscellaneous RNA (miscRNA) features.

scholarly journals Draft Genome Sequence of Weissella viridescens UCO-SMC3, Isolated from the Slime of Helix aspersa Müller Snails

2019 ◽  
Vol 8 (11) ◽  
Author(s):  
Apolinaria Garcia-Cancino ◽  
Leonardo Albarracin ◽  
Marcela Espinoza-Monje ◽  
Jorge Campos-Martin ◽  
Valeria Garcia-Castillo ◽  
...  
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Illumina Miseq ◽  
Helix Aspersa ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Content Type

This report describes the draft genome sequence of Weissella viridescens UCO-SMC3, isolated from Helix aspersa Müller slime. The reads were generated by a whole-genome sequencing (WGS) strategy on an Illumina MiSeq sequencer and were assembled into contigs with a total estimated size of 1,612,814 bp.

scholarly journals Draft Genome Sequence of Parageobacillus thermoglucosidasius Strain TG4, a Hydrogenogenic Carboxydotrophic Bacterium Isolated from a Marine Sediment

2019 ◽  
Vol 8 (5) ◽  
Author(s):  
Masao Inoue ◽  
Ayumi Tanimura ◽  
Yusuke Ogami ◽  
Taiki Hino ◽  
Suguru Okunishi ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Marine Sediment ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Biotechnological Potential ◽  
Content Type ◽  
Parageobacillus Thermoglucosidasius

Parageobacillus thermoglucosidasius possesses biotechnological potential for fuel generation. Here, we report the draft genome sequence of P. thermoglucosidasius strain TG4, which was first isolated from a marine sediment.

scholarly journals Draft Genome Sequence of Ligilactobacillus salivarius TUCO-L2, Isolated from Lama glama Milk

2020 ◽  
Vol 9 (32) ◽  
Author(s):  
Leonardo Albarracin ◽  
Sandra Quilodrán-Vega ◽  
Kohtaro Fukuyama ◽  
Mikado Tomokiyo ◽  
M. Aminul Islam ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Illumina Miseq ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Content Type ◽  
A Genome ◽  
Miseq Platform ◽  
Lama Glama

ABSTRACT Ligilactobacillus salivarius TUCO-L2 was isolated from llama milk in Bio-Bio, Chile, and sequenced with the Illumina MiSeq platform. TUCO-L2 genome sequencing revealed a genome size of 1,600,747 bp with 1,691 protein-coding genes and a GC content of 33%. This draft genome sequence will contribute to a better understanding of the microbiome of llama milk.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

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