scholarly journals Molecular Diversity of Arbuscular Mycorrhizal Fungi (AMF) Associated with Carissa edulis, an Endangered Plant Species along Lake Victoria Basin of Kenya

2021 ◽  
Vol 2021 ◽  
pp. 1-10
Author(s):  
Benard O. Ogoma ◽  
Stephen F. Omondi ◽  
Jane Ngaira ◽  
Josephine W. Kimani

Carissa edulis is a tropical plant belonging to the family Apocynaceae. The species is widely used in the preparation of various herbal medicines. Earlier works in Kenya show that an aqueous extract from the roots of C. edulis has remarkable anti-herpes simplex virus. Due to its medicinal value, the species has been overexploited in its natural range and requires conservation interventions. Studies show that the species has beneficial relationships with arbuscular mycorrhizal fungi (AMF) that can enhance restoration of its population; however, no study has been undertaken to document the diversity of these AMF species. This study evaluated the genetic diversity of AMF associated with the roots of C. edulis within Lake Victoria basin ecosystem of Kenya. A cross-sectional, laboratory-based prospective study was carried out from roots of C. edulis collected from six sites within the ecosystem. Root samples were collected from 6 points (replicates) per site. AMF was assessed through morphological characterization and sequencing of small subunit of ribosomal DNA. Morphological identification identified four genera of AMF (Gigaspora, Acaulospora, Scutellospora, and Glomus) with no significant difference among the sites. Molecular analysis also revealed presence of four genera, but only two (Glomus and Acaulospora) were common for both the analyses with Glomus as the most predominant genera. In all the sites, there were large numbers of spores both in soil and in the roots confirming the association between C. edulis and AMF.

2014 ◽  
Vol 2014 ◽  
pp. 1-8 ◽  
Author(s):  
Peng Wang ◽  
Yin Wang

Morphological observation of arbuscular mycorrhizal fungi (AMF) species in rhizospheric soil could not accurately reflect the actual AMF colonizing status in roots, while molecular identification of indigenous AMF colonizing citrus rootstocks at present was rare in China. In our study, community of AMF colonizing trifoliate orange (Poncirus trifoliataL. Raf.) and red tangerine (Citrus reticulataBlanco) were analyzed based on small subunit of ribosomal DNA genes. Morphological observation showed that arbuscular mycorrhizal (AM) colonization, spore density, and hyphal length did not differ significantly between two rootstocks. Phylogenetic analysis showed that 173 screened AMF sequences clustered in at least 10 discrete groups (GLO1~GLO10), all belonging to the genus ofGlomusSensu Lato. Among them, GLO1 clade (clustering with uncultured Glomus) accounting for 54.43% clones was the most common in trifoliate orange roots, while GLO6 clade (clustering withGlomus intraradices) accounting for 35.00% clones was the most common in red tangerine roots. Although, Shannon-Wiener indices exhibited no notable differences between both rootstocks, relative proportions of observed clades analysis revealed that composition of AMF communities colonizing two rootstocks varied severely. The results indicated that native AMF species in citrus rhizosphere had diverse colonization potential between two different rootstocks in the present orchards.


Afrika Focus ◽  
2013 ◽  
Vol 26 (2) ◽  
pp. 111-131
Author(s):  
Tadesse Chanie Sewnet ◽  
Fassil Assefa Tuju

In a first step to understand the interactions between Colfea arabica L. trees and mycorrhizae in Ethiopia, an investigation of the current mycorrhizal colonization status of roots was undertaken. We sampled 14 shade tree species occurring in coffee populations in Bonga forest, Ethiopia. Milletia ferruginea, Schefflera abyssinica, Croton macrostachyus, Ficus vasta, F. sur, Albizia gummifera, Olea capensis, Cordia africana, Ehretia abyssinica, Pouteria adolfi-friederici, Pavetta oliveriana, Prunus africana, Phoenix reclinata and Polyscias fulva. Coffee trees sampled under each shade tree were all shown to be colonized by arbuscular mycorrhizal fungi (AM fungi). Four genera and 9 different species of AM fungi were found in the soils. Glomus (Sp1, Sp2, & Sp3 & Sp4), Scutellospora (Sp1 & Sp2) and Gigaspora (Sp1 & Sp2) were found under all 14 shade tree species, whereas Acaulospora (Sp1) occurred only in slightly acidic soils, within a pH range of 4.93-5.75. Generally, roots of the coffee trees were colonized by arbuscules to a greater degree than those of their shade trees, the arbuscular colonization percentage (AC%) of the former being higher than the latter (significant difference at 0.05 level). Though differences were not statistically significant, the overall hyphal colonization percentage (HC%) and mycorrhizal hyphal colonization percentage (MHC%) were shown to be slightly higher under coffee trees than under their shade trees. However, the differences were statistically significant at 0.05 level in the case of HC% values of coffee trees under Pouteria adolf-friederici and MHC% under Cordia africana. Spore density and all types of proportional root colonization parameters (HC%, MHC%, AC% and vesicular colonization percentage, VC%) for both coffee and shade trees were negatively and significantly correlated with organic soil carbon, total N, available P, EC and Zn. Correlation between arbuscular colonization for coffee (AC%) and organic carbon was not significantly positive at a 0.05 level. Incidence of specific spore morphotypes was also correlated with physical and chemical soil properties. Results indicate that AM fungi could potentially be important in aforestation and help to promote coffee production activities in Ethiopia providing an alternative to expensive chemical fertilizer use, and would offer management methods that take advantage of natural systems dynamics that could potentially preserve and enhance coffee production.


Plants ◽  
2019 ◽  
Vol 9 (1) ◽  
pp. 37 ◽  
Author(s):  
Yves H. Tchiechoua ◽  
Johnson Kinyua ◽  
Victoria Wambui Ngumi ◽  
David Warambo Odee

Prunus africana bark contains phytochemical compounds used in the treatment of benign prostatic hyperplasia and prostate cancer. It has been shown that this plant establishes association with arbuscular mycorrhizal fungi (AMF). AMF are involved in nutrient uptake, which may also affect plant growth and secondary metabolites composition. However, there is no information regarding the role of AMF in the growth and phytochemical content of P. africana. A pot experiment was carried out to assess the response of 8 months old vegetatively propagated P. africana seedlings inoculated with indigenous AMF collected from Mount Cameroon (MC) and Mount Manengumba (MM) in Cameroon, Malava near Kakamega (MK) and Chuka Tharaka-Nithi (CT) in Kenya. Mycorrhizal (frequency, abundance and intensity), growth (height, shoot weight, total weight, number of leaf, leaf surface) and phytochemical (total phenol, tannin and flavonoids) parameters were measured three months after growth of seedlings from two provenances (Muguga and Chuka) with the following inoculation treatments: MK, CT, MC, MM, non-sterilized soil (NS) and sterilized sand as non-inoculated control. Results showed that seedling heights were significantly increased by inoculation and associated with high root colonization (>80%) compared to non-inoculated seedlings. We also found that AMF promoted leaf formation, whereas inoculation did not have any effect on the seedling total weight. AMF inoculum from MM had a higher tannin content, while no significant difference was observed on the total phenol and flavonoid contents due to AMF inoculation. Pearson’s correlation was positive between mycorrhizal parameters and the growth parameters, and negative with phytochemical parameters. This study is the first report on the effect of AMF on the growth and phytochemical in P. africana. Further investigations are necessary to determine the effect of single AMF strains to provide better understanding of the role of AMF on the growth performance and physiology of this important medicinal plant species.


2016 ◽  
Vol 67 (10) ◽  
pp. 1116 ◽  
Author(s):  
Guangzhou Wang ◽  
Xia Li ◽  
Peter Christie ◽  
Junling Zhang ◽  
Xiaolin Li

Foraging strategies in arbuscular mycorrhizal fungi (AMF) for heterogeneously distributed resources in the soil remain to be explored. We used nylon-mesh bags of 30 μm to simulate patches of different phosphorus (P) supply levels (Expt 1) and P forms (organic v. inorganic, Expts 1 and 2). In Expt 1, host maize (Zea mays) was unfertilised; in each pot, five P-enriched bags were supplied with either Na-phytate or KH2PO4 at P rates of 0 (P0), 50 (P50), 100 (P100), 150 (P150) and 200 (P200) mg P kg–1. In Expt 2, maize plants were supplied with 20 (P20) or 50 (P50) mg P kg–1, and five P-enriched bags were supplied with different P forms (Na-phytate, lecithin, RNA, KH2PO4) and a nil-P control. Three fungal species (Funneliformis mosseae, Rhizophagus irregularis, and Glomus etunicatum) were compared in Expt 1, and the first two species in Expt 2. In Expt 1, the hyphal-length density (HLD) of G. etunicatum was not significantly different among different P levels when supplied with KH2PO4, whereas the HLD of R. irregularis tended to increase at higher P supply (above P50) in the Na-phytate treatment. The HLD of F. mosseae increased at P150 when supplied with KH2PO4, and increased at P100 and P150 in the Na-phytate treatment relative to P0. APase activity levels were more related to P supply level, in particular with F. mosseae inoculation and uninoculated control, showing that P200 significantly reduced APase relative to P0. In Expt 2, greater hyphal growth of both fungal species tended to occur with KH2PO4. At P20, the HLD of R. irregularis in treatments with KH2PO4 and lecithin, and of F. mosseae with KH2PO4, were higher than in P0. At P50, the HLD of F. mosseae was higher than of R. irregularis; but P form had no significant influence on HLD of F. mosseae, whereas the HLD of R. irregularis in the P-amended treatment (except with Na-phytate) was higher than in P0. APase activity did not differ significantly between the two fungal species. Highest APase activity generally occurred with lecithin, with no significant difference among the other P forms. Our results indicate that the response of AMF to P-enriched patches is complex, and both the form and amount of P supplied should be considered. Variations between AMF in the proliferation of hyphae to heterogeneous nutrient patches might be a mechanism by which these species can maintain diversity in intensive agricultural ecosystems.


Author(s):  
Yolanda Del Carmen Pérez-Luna

The aim of this study was to evaluate the effect of the colonization of arbuscular mycorrhizal fungi in the production of secondary metabolites in Petroselinum crispum, Salvia officinalis and Dysphania ambrosioides. Three treatments were established: Control (C), commercial inoculum (CI) and native inoculum (NI). Every 15 days height, stem diameter and number of leaves were measured. The percentage of colonization was assessed by staining of roots, and identification of flavonoids through TLC thin layer chromatography, finally the concentration of total phenols was evaluated by spectrophotometry from the ethanol extracts of each plant. The results of development of biomass and the percentage of colonization show statistically significant difference for the three variables evaluated (P≤0.05) from each culture in the treatment of NI with respect to control, showing a greater effect on plants of S. officinalis (51% and 91%, respectively). Chromatography reveals the presence of flavonoids in the three plants; however this is more intense for the treatment of NI, showing increased production of total phenols in S. officinalis. Finally, the chemical characterization of the substrate shows a higher assimilation of nitrogen and phosphorus (0.11% and 0.35 mg / kg respectively) in S. officinalis associated with a native inoculum (NI). 


Agronomy ◽  
2021 ◽  
Vol 11 (12) ◽  
pp. 2468
Author(s):  
Carlos H. Rodríguez-León ◽  
Clara P. Peña-Venegas ◽  
Armando Sterling ◽  
Herminton Muñoz-Ramirez ◽  
Yeny R. Virguez-Díaz

Natural restoration of ecosystems includes the restoration of plant-microbial associations; however, few studies had documented those changes in tropical ecosystems. With the aim to contribute to understand soil microbial changes in a natural regrowth succession of degraded pastures that were left for natural restoration, we studied changes in arbuscular mycorrhizal (AM) fungal communities. Arbuscular mycorrhizal fungi (AMF) establish a mutualistic symbiosis with plants, improving plant nutrition. Amplification of the small subunit rRNA with specific primers and subsequent Illumina sequencing were used to search soil-borne AM fungal communities in four successional natural regrowth stages in two landscapes (hill and mountain) with soil differences, located in the Andean-Amazonian transition. Molecular results corroborated the results obtained previously by spores-dependent approaches. More abundance and virtual taxa of AMF exist in the soil of degraded pastures and early natural regrowth stages than in old-growth or mature forest soils. Although changes in AM fungal communities occurred similarly over the natural regrowth chronosequence, differences in soil texture between landscapes was an important soil feature differentiating AM fungal community composition and richness. Changes in soil-borne AM fungal communities reflect some signals of environmental restoration that had not been described before, such as the reduction of Glomus dominance and the increase of Paraglomus representativeness in the AM fungal community during the natural regrowth chronosequence.


2019 ◽  
Vol 3 (1) ◽  
pp. 107-115
Author(s):  
Wagner Gonçalves Vieira Junior ◽  
Diogo Jânio de Carvalho Matos ◽  
Thales Caetano de Oliveira ◽  
Leidiane Dos Santos Lucas ◽  
Isabelly Ribeiro Lima ◽  
...  

The peppers business is an important segment of the Brazilian agricultural market, with strong expression in the food, pharmaceutical and cosmetic industries. The objective of this work was to determine the mycorrhizal colonization rate, spore density and mycorrhizal fungi genotypes associated with the rhizosphere of ten lines of chilli peppers (Capsicum frutescens). The experimental design was completely randomized, with 10 treatments and 4 replicates, with the ten strains of Capsicum frutescens: IFET-1121; IFET-1109; IFET-1129; IFET-1119; IFET-1117; IFET-1137; IFET-1131; IFET-1127; IFET-1125 and IFET-1111. The spores of arbuscular mycorrhizal fungi (AMF) will be extracted from the soil using 50 cm³ of each composite sample, using the wet sieving technique. The determination of the percentage of mycorrhizal colonization occurred through the technique of intersection of the quadrants. The identification of mycorrhizal fungi species was by morphological comparison based on the descriptions of the reference cultures present in the International Culture Collection of Arbuscular and Vesicular-Arbuscular Mycorrhizal Fungi. The spore number and mycorrhizal colonization data will be submitted to classical statistical analysis using the Assistat program (2016). The genus Acaulospora, Claroideoglomus, Diversispora, Scutellospora, Sclerocystis, Glomus, Funneliformis and Gigaspora associated with the rhizosphere of the Capsicum frutescens strains were identified. The genera Glomus, acaulosporand Claroideoglomuswere found in all strains analyzed. The IFET - 1127 strain presented higher spore density values when compared to the other strains studied. No significant difference was found in the values of mycorrhizal colonization rate among the investigated strains


2016 ◽  
Vol 44 (2) ◽  
pp. 533-540 ◽  
Author(s):  
Xue YANG ◽  
Hongqing YU ◽  
Tao Zhang ◽  
Jixun GUO ◽  
Xiang ZHANG

Arbuscular mycorrhizal fungi (AMF) play a key role in plant growth and survival; however, the influence of AMF on the growth and production of Suaedoideae species is still not well understood. The object of this study was to understand the mechanism of AMF that affects the growth of Suaedoideae species under different saline conditions. The result showed that the Suaedoideae species Suaeda physophora was colonized by the AMF species Glomus etunicatum (Ge) and Glomus mosseae (Gm). AMF significantly increased the activities of superoxide dismutase (SOD) and peroxidase (POD) in S. physophora and reduced the concentrations of malondialdehyde (MDA) and H2O2 in the leaves of S. physophora under salt stress. AMF also improved the aboveground biomass of S. physophora and significantly increased its seed numbers. Moreover, AMF increased the aboveground phosphorus (P) content of S. physophora. No significant difference between the effect of AMF species Ge and Gm on S. physophora growth was observed. These results suggest that AMF can increase the salt resistance of the Suaedoideae species S. physophora by increasing SOD and POD activities, reducing MDA and H2O2 concentrations and increasing P uptake. The results highlight that AMF might play an important role in S. physophora growth and population survival under harsh salt conditions.


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