Morphological and molecular evidence for the recognition of Caloglossa fonticola sp. nov. (Delesseriaceae, Rhodophyta) from an underground spring in Guangxi, China

Phytotaxa ◽  
2021 ◽  
Vol 522 (1) ◽  
pp. 15-26
Author(s):  
KUN-PENG FANG ◽  
FANG-RU NAN ◽  
JIA FENG ◽  
QI LIU ◽  
XU-DONG LIU ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Dna Sequences ◽  
Sequence Divergence ◽  
Molecular Evidence ◽  
Unique Combination ◽  
High Sequence Divergence ◽  
Molecular Phylogenetic ◽  
Freshwater Habitats ◽  
Globally Distributed ◽  
Lateral Axis

Caloglossa (Ceramiales, Rhodophyta) is a globally distributed euryhaline red macroalgal genus. However, only a few Caloglossa species have been documented in permanent freshwater habitats. Here, a new Caloglossa species, Caloglossa fonticola sp. nov., is described and illustrated from an underground spring in Bama County, Guangxi, China, based on morphological observations and molecular phylogenetic analysis. The new species is morphologically distinguishable from other species in the genus by a unique combination of character states, including thallus internodal blades linear, hardly or slightly constricted at nodes, adventitious branches and endogenous branches both absent, and unicellular rhizoids forming from clusters of wing cells arising from the first three axial cells of the main axis and lateral axis. Phylogenetic analysis based on rbcL and LSU rRNA DNA sequences indicated that Caloglossa fonticola was nested in a well-supported clade with Caloglossa bengalensis (Bootstrap supports for ML/posterior probabilities for BI: rbcL-98/1.00, LSU-100/1.00), with high sequence divergence between these two species (8.2–8.4% for rbcL and 3.2% for LSU), supporting its specific status. This is the first species of the genus Caloglossa reported in spring water habitats. The description of C. fonticola expands the known diversity of Caloglossa.

A REVISED GENERIC SYNOPSIS OF HYACINTHACEAE IN SUB-SAHARAN AFRICA, BASED ON MOLECULAR EVIDENCE, INCLUDING NEW COMBINATIONS AND THE NEW TRIBE PSEUDOPROSPEREAE

2003 ◽  
Vol 60 (3) ◽  
pp. 533-568 ◽  
Author(s):  
J. C. MANNING ◽  
P. GOLDBLATT ◽  
M. F. FAY
Keyword(s):  
Phylogenetic Analysis ◽  
Sub Saharan Africa ◽  
Molecular Evidence ◽  
New Combinations ◽  
Generic Level ◽  
The Family ◽  
Molecular Phylogenetic ◽  
Single Genus ◽  
New Tribe ◽  
Sub Saharan

A revised generic synopsis of sub-Saharan Hyacinthaceae is presented, based on a molecular phylogenetic analysis of the family. Generic rank is accorded only to reciprocally monophyletic clades that can be distinguished by recognizable morphological discontinuities, thereby permitting an appropriate generic assignment of species not included in the analysis. Three subfamilies are recognized within the region. Subfamily Ornithogaloideae, characterized by flattened or angular seeds with tightly adhering testa, is considered to include the single genus Ornithogalum, which is expanded to include the genera Albuca, Dipcadi, Galtonia, Neopatersonia and Pseudogaltonia. Recognizing any of these segregates at generic level renders the genus Ornithogalum polyphyletic, while subdivision of Ornithogalum into smaller, morphologically distinguishable segregates in order to preserve the monophyly of each is not possible. Subfamily Urgineoideae, characterized by flattened or winged seeds with brittle, loosely adhering testa, comprises the two mainland African genera Bowiea and Drimia. The latter is well circumscribed by its deciduous, short-lived perianth and includes the previously recognized genera Litanthus, Rhadamanthus, Schizobasis and Tenicroa. The monotypic Madagascan Igidia is provisionally included in the subfamily as a third genus on the basis of its seeds, pending molecular confirmation of its relationships. Subfamily Hyacinthoideae resolves into three clades, distinguished as tribes Hyacintheae (strictly northern hemisphere and not treated further), Massonieae and Pseudoprospereae tribus nov. Full descriptions and a key to their identification are provided for all genera. New combinations reflecting the generic circumscriptions adopted here are made for most African and all Indian and Madagascan species.

Pilaira australis sp. nov. (Mucorales, Mucoromycota) isolated from emu faeces in Australia

Phytotaxa ◽  
2017 ◽  
Vol 329 (3) ◽  
pp. 277 ◽  
Author(s):  
ANDREW S. URQUHART ◽  
PAULINE M. L. COULON ◽  
ALEXANDER IDNURM
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Species Identification ◽  
Internal Transcribed Spacers ◽  
Molecular Phylogenetic Analysis ◽  
Unique Combination ◽  
Dromaius Novaehollandiae ◽  
Molecular Phylogenetic ◽  
Carbon Utilisation ◽  
A New Species

Pilaira australis, a new species of fungus in the coprophilous genus Pilaira, was isolated from emu (Dromaius novaehollandiae) faeces and is described. Morphologically, the species resembles other species in the genus, particularly P. moreaui, except differs in its unique combination of sporangiophore height and sporangiospore length. Molecular phylogenetic analysis indicates that P. australis is distinct from other species in the genus with two regions, the internal transcribed spacers (ITS) and a fragment of the pyrG gene, showing 91% and 90% identity to the nearest species, respectively. Ultrastructure features and carbon utilisation were determined for P. australis, and may provide characteristics for species identification in this genus.

scholarly journals Dicranum ignatovii sp. nova (Dicranaceae, Bryophyta) from the Far East

2018 ◽  
Vol 12 (1) ◽  
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Far East ◽  
Integrative Taxonomy ◽  
Rrna Gene ◽  
Unique Combination ◽  
Leaf Lamina ◽  
Kurile Islands ◽  
The Far East ◽  
Molecular Phylogenetic

The new species Dicranum ignatovii Tubanova & Fedosov is described from Sakhalin, South Kurile Islands and the Khabarovsk Territory based on the approach of integrative taxonomy. The species is characterized by the unique combination of (1) short leaves with broadly acute apex, (2) slightly recurved distal leaf lamina, (3) short-rectangular to transverse rectangular distal leaf cells, (4) proximal leaf cells abruptly shortened distally and thus occupying only the basalmost leaf portion, (5) costa ending before apex, and (6) presence of flagelliform branchlets in upper leaf axils. Based on nrITS 1, 2 & 5.8 rRNA gene sequences, molecular phylogenetic analysis was carried out. As a result, three studied specimens were found in a well supported clade, nested in a weakly supported clade where D. acutifolium, D. caesium, D. bardunovii, D. angustum, D. bonjeanii, D. scoparium and D. brevifolium were also found.

The Phylogenetic Position of Crenea in the Lythraceae Based on Molecular Evidence, and the Transfer of Its Two Species to Ammannia

2021 ◽  
Vol 106 ◽  
pp. 325-339
Author(s):  
Shirley A. Graham ◽  
Peter W. Inglis ◽  
Taciana B. Cavalcanti
Keyword(s):  
Morphological Character ◽  
Phylogenetic Analyses ◽  
Taxonomic Status ◽  
Phylogenetic Position ◽  
Molecular Evidence ◽  
Monophyletic Lineage ◽  
The Family ◽  
Mangrove Vegetation ◽  
Molecular Phylogenetic ◽  
Globally Distributed

Crenea Aubl. (Lythraceae) is a ditypic genus of subshrubs occurring in mangrove vegetation on the coasts of northern South America. Phylogenetic analyses based on morphology have offered unresolved and conflicting phylogenetic positions for the genus in the family. This study presents the first molecular sequences for Crenea, from nrITS, rbcL, trnL, trnL-F, and matK regions. Molecular phylogenetic analyses find full support for Crenea within Ammannia L., a relationship not previously recognized. Ammannia is a globally distributed genus of terrestrial to amphibious herbs mostly occurring in freshwater marshes and wetlands. It was recently reconfigured based on phylogenetic evidence to include the genera Nesaea Comm. ex Kunth and Hionanthera A. Fern. & Diniz. The transfer of Crenea to Ammannia further extends the morphological, ecological, and biogeographical diversity of Ammannia and provides the final evidence defining Ammannia as a monophyletic lineage of the Lythraceae. A revised circumscription of Ammannia s.l. adds several new morphological character states and the first species in the genus restricted to mangrove vegetation. Two changes in taxonomic status are made: Ammannia maritima (Aubl.) S. A. Graham, P. W. Inglis, & T. B. Cavalc., comb. nov., and Ammannia patentinervius (Koehne) S. A. Graham, P. W. Inglis, & T. B. Cavalc., comb. nov. The new combinations are described, a list of exsiccatae examined is provided, and the effects of the reconfiguration to the morphology and biogeography of the genus are detailed.

Gelidium guimaraesiae sp. nov. (Gelidiaceae, Rhodophyta) from the Western Atlantic segregated from G. floridanum by morphological and molecular evidence

Phytotaxa ◽  
2019 ◽  
Vol 388 (4) ◽  
pp. 275 ◽  
Author(s):  
BEATRIZ BRUNELLI ◽  
DANIELA MILSTEIN ◽  
SUNG M. BOO ◽  
MUTUE T. FUJII
Keyword(s):  
Dna Sequences ◽  
Sequence Divergence ◽  
Molecular Data ◽  
Brazilian Coast ◽  
Molecular Evidence ◽  
Similar Species ◽  
Western Atlantic ◽  
Gelidium Floridanum ◽  
Morphological And Molecular Data ◽  
A New Species

The Gelidium species are susceptible to a great phenotypic plasticity. In this genus, studies integrating morphological and molecular data have been increasingly used to define species. To date nine Gelidium species are reported along the Brazilian coast. Gelidium floridanum is the most frequently recorded species in Brazilian but it is also often confused with morphologically similar species, especially in the field or when reproductive structures are absent. In this study we analyzed specimens from Brazil previously identified as G. floridanum based on the morphological and molecular data (cox1 and rbcL DNA sequences). Newly collected specimens from Brazil showed a DNA sequence divergence from G. floridanum in the order of 1.0–1.4% for rbcL and 4.2% for cox1, enough to be considered a new species, here described as Gelidium guimaraesiae sp. nov.

A new species of Conocybe (Bolbitaceae) from Punjab, Pakistan

Phytotaxa ◽  
2019 ◽  
Vol 402 (5) ◽  
pp. 251
Author(s):  
AIMAN IZHAR ◽  
HIRA BASHIR ◽  
ABDUL NASIR KHALID
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Its Region ◽  
Molecular Phylogenetic Analysis ◽  
Molecular Evidence ◽  
Fruiting Bodies ◽  
Germ Pore ◽  
Central Disc ◽  
Molecular Phylogenetic ◽  
A New Species

Conocybe punjabensis sp. nov., a species belonging to the saprobic family Bolbitaceae, is illustrated and described from Pakistan based on morphology and molecular evidence. The species can be distinguished on the basis of medium-sized fruiting bodies, a pileus with a dark brown central disc, a fibrillose stipe, forked lamellae near pileus margin, ellipsoid angular basidiospores with an apical germ pore, cheilocystidia and pleurocystidia varying from catenulate, lecythiform to clavate, and lecythiform caulocystidia. Molecular phylogenetic analysis of the nuclear ribosomal ITS region also supports the recognition of this new species in Conocybe. Detailed descriptions, photographs, illustrations and comparison with allied taxa are given.

First report of Limacella from Bangladesh, with a new species description

Phytotaxa ◽  
2017 ◽  
Vol 332 (3) ◽  
pp. 280 ◽  
Author(s):  
MD. IQBAL HOSEN ◽  
TAI-HUI LI
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Large Subunit ◽  
Species Description ◽  
Molecular Evidence ◽  
Molecular Phylogenetic ◽  
The Common ◽  
New Species Description ◽  
Generic Record ◽  
A New Species

Limacella bangladeshana, a new species of well-known fungal family Amanitaceae from Bangladesh is described and illustrated based on morphology and molecular evidence. The species is mainly recognized by its medium-sized basidiomata, cream-white to off-white or buff-white pileus, the slightly uplifted pileal margin, globose basidiospores measuring 3.5–4 × 3.5–4 µm, an ixo-trichodermal pileipellis, and the common presence of clamp connections. Molecular phylogenetic analysis using sequence of the nuclear ribosomal large subunit (nrLSU) also supports the recognition of the new species in Limacella. This species represents the first generic record of Limacella for Bangladesh. Detailed description, color photos and illustration, and comparison with allied taxa are presented. 

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