scholarly journals Draft Genome Sequencing of the Pathogenic Fungus Cladosporium phlei ATCC 36193 Identifies Candidates of Novel Polyketide Synthase Genes Involved in Perylenequinone-Group Pigment Production

2019 ◽  
Vol 15 ◽  
pp. 117693431983130
Author(s):  
Yu-Na Kang ◽  
Kum-Kang So ◽  
Do-Wan Kim ◽  
Dae-Hyuk Kim ◽  
Tae-Ho Lee
Keyword(s):  
Phylogenetic Analysis ◽  
Polyketide Synthase ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Genome Sequences ◽  
Draft Sequence ◽  
Cladosporium Sphaerospermum ◽  
Eyespot Disease ◽  
Cladosporium Phlei ◽  
Draft Genome Sequencing

Cladosporium phlei, which causes purple eyespot disease, has been focused on as a source of phleichrome from the perylenequinone group of pigments. Although this agent is important in photodynamic therapy, there are no genome sequences for the species. Here, we sequenced the genome of C. phlei and reported the draft sequence. The total length of the draft genome was approximately 31.8 Mb, and 9571 genes were predicted. Phylogenetic analysis showed that Cladosporium sphaerospermum, Rachicladosporium sp., and Rachicladosporium antarcticum were closely related, and this result corresponded to the taxonomic data. In addition to the draft genome sequence, we report four candidates of new polyketide synthase (PKS) genes, involved in the production of perylenequinone-group pigments.

scholarly journals Draft Genome Sequences of 40 Salmonella enterica Serovar Typhimurium Strains Isolated from Humans and Food in Brazil: TABLE 1 

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Fernanda Almeida ◽  
Marta Inês Cazentini Medeiros ◽  
Dália Prazeres Rodrigues ◽  
Justin Payne ◽  
Ruth E. Timme ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Health Problem ◽  
Salmonella Enterica ◽  
Salmonella Enterica Serovar Typhimurium ◽  
Draft Genome ◽  
Genome Sequences ◽  
Serovar Typhimurium ◽  
Important Health

Salmonellosis is an important health problem worldwide and Salmonella enterica serovar Typhimurium is one of the most common isolated serovars. Here, we reported the draft genomes of 40 S . Typhimurium strains isolated from humans and food in Brazil. These draft genomes will improve phylogenetic analysis and will help enhance our understanding of strains of this serovar isolated in Brazil.

scholarly journals Draft Genome Sequences of Lysostaphin-Resistant (K07-204) and Lysostaphin-Susceptible (K07-561) Staphylococcus aureus Sequence Type 72 Strains Isolated from Patients in South Korea

2020 ◽  
Vol 9 (49) ◽  
Author(s):  
Nayab Batool ◽  
Kwan Soo Ko ◽  
Akhilesh Kumar Chaurasia ◽  
Kyeong Kyu Kim
Keyword(s):  
Staphylococcus Aureus ◽  
South Korea ◽  
Genome Sequencing ◽  
Draft Genome ◽  
Sequence Type ◽  
Genome Sequences ◽  
Content Type ◽  
Subtractive Genomics ◽  
Draft Genome Sequencing ◽  
Different Levels

ABSTRACT Methicillin-resistant Staphylococcus aureus sequence type 72 (ST72) is prevalent in South Korea and has shown resistance to multiple antimicrobials. ST72 isolates display different levels of resistance to the antistaphylococcal lysostaphin. Draft genome sequencing of ST72 human isolates exhibiting lysostaphin resistance or susceptibility was performed to better understand the mechanism of lysostaphin resistance using subtractive genomics.

scholarly journals Draft Genome Sequence of Penicillium marneffei Strain PM1

2011 ◽  
Vol 10 (12) ◽  
pp. 1740-1741 ◽  
Author(s):  
Patrick C. Y. Woo ◽  
Susanna K. P. Lau ◽  
Bin Liu ◽  
James J. Cai ◽  
Ken T. K. Chong ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Polyketide Synthase ◽  
Pathogenic Fungus ◽  
Complete Mitochondrial Genome ◽  
Draft Genome ◽  
Penicillium Marneffei ◽  
Sexual Cycle ◽  
Draft Genome Sequence ◽  
Hiv Positive ◽  
Content Type

ABSTRACT Penicillium marneffei is the most important thermal dimorphic, pathogenic fungus endemic in China and Southeast Asia and is particularly important in HIV-positive patients. We report the 28,887,485-bp draft genome sequence of P. marneffei , which contains its complete mitochondrial genome, sexual cycle genes, a high diversity of Mp1p homologues, and polyketide synthase genes.

scholarly journals Draft Genome Sequences of Two Isolates of the Plant-Pathogenic Fungus Neonectria ditissima That Differ in Virulence

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Cecilia H. Deng ◽  
Reiny W. A. Scheper ◽  
Amali H. Thrimawithana ◽  
Joanna K. Bowen
Keyword(s):  
Comparative Genomics ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Causal Agent ◽  
Genome Sequences ◽  
Plant Pathogenic Fungus ◽  
Apple Canker

Neonectria ditissima is the causal agent of apple canker. Here, we present the draft genome sequences of two isolates of N. ditissima that differ in virulence. Comparative genomics will enable pathogenicity determinants to be identified in this plant-pathogenic fungus.

scholarly journals Draft Genome Sequences of Sporulating (CIDEFI-213) and Nonsporulating (CIDEFI-212) Strains of Stemphylium lycopersici

2018 ◽  
Vol 7 (6) ◽  
Author(s):  
Rocio Medina ◽  
Mario Emilio Ernesto Franco ◽  
Gustavo Lucentini ◽  
Mario Carlos Nazareno Saparrat ◽  
Pedro Alberto Balatti
Keyword(s):  
Leaf Spot ◽  
Pathogenic Fungus ◽  
Draft Genome ◽  
Gray Leaf Spot ◽  
Economic Losses ◽  
Leaf Spot Disease ◽  
Genome Sequences ◽  
Content Type ◽  
Spot Disease ◽  
Stemphylium Lycopersici

Stemphylium lycopersici (Pleosporales) is a pathogenic fungus found on a broad range of plant hosts. It is one of the causal agents of gray leaf spot disease in tomato that causes severe yield reductions and economic losses worldwide.

scholarly journals Draft Genome Sequences of Three Pseudomonas fluorescens Strains Isolated from Marine Sponges Harvested off the West Coast of Ireland

2020 ◽  
Vol 9 (21) ◽  
Author(s):  
José A. Gutiérrez-Barranquero ◽  
María L. Parages ◽  
Alan D. W. Dobson ◽  
F. Jerry Reen ◽  
Fergal O’Gara
Keyword(s):  
Phylogenetic Analysis ◽  
Pseudomonas Fluorescens ◽  
Draft Genome ◽  
Marine Sponges ◽  
Average Nucleotide Identity ◽  
Genome Sequences ◽  
The West ◽  
Quorum Sensing Inhibition ◽  
Content Type ◽  
Or Gene

ABSTRACT Three Pseudomonas sp. strains isolated from marine sponges have shown potential quorum sensing inhibition (QSI) activity. We sequenced the draft genomes of the three strains with the goal of determining which genes or gene cluster(s) could be potentially involved in the QSI activity. Average nucleotide identity (ANI) and phylogenetic analysis classified the three strains as belonging to the Pseudomonas fluorescens species.

scholarly journals Draft Genome Sequences of Streptococcus agalactiae Serotype Ia and III Isolates from Tilapia Farms in Thailand

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Nontawith Areechon ◽  
Korntip Kannika ◽  
Ikuo Hirono ◽  
Hidehiro Kondo ◽  
Sasimanas Unajak
Keyword(s):  
Genome Sequencing ◽  
Streptococcus Agalactiae ◽  
Draft Genome ◽  
Genome Sequences ◽  
Pond Culture ◽  
Draft Genome Sequencing

Streptococcus agalactiae serotypes Ia and III were isolated from infected tilapia in cage and pond culture farms in Thailand during 2012 to 2014, in which pathogenicity analysis demonstrated that serotype III showed higher virulence than serotype Ia. Here, we report the draft genome sequencing of piscine S. agalactiae serotypes Ia and III.

scholarly journals Draft Genome Sequences of 12 Mycolicibacterium smegmatis Strains Resistant to Imidazo[1,2-b][1,2,4,5]Tetrazines

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Aleksey A. Vatlin ◽  
Kirill V. Shur ◽  
Valery N. Danilenko ◽  
Dmitry A. Maslov
Keyword(s):  
Draft Genome ◽  
Transcriptional Repressor ◽  
Antituberculosis Drug ◽  
Genome Sequences ◽  
Content Type ◽  
Drug Candidates

Here, we report 12 draft genome sequences of mutant Mycolicibacterium smegmatis strains resistant to imidazo[1,2-b][1,2,4,5]tetrazines, which are antituberculosis drug candidates. We have identified 7 different mutations in the MSMEG_1380 gene, which encodes the AcrR/TetR_N transcriptional repressor, which may activate efflux-mediated resistance.

Sign in / Sign up

Export Citation Format

Share Document