RNAmute: RNA secondary structure mutation analysis tool

Alexander Churkin; Danny Barash

doi:10.1186/1471-2105-7-221

RNAmute: RNA secondary structure mutation analysis tool

BMC Bioinformatics ◽

10.1186/1471-2105-7-221 ◽

2006 ◽

Vol 7 (1) ◽

Cited By ~ 25

Author(s):

Alexander Churkin ◽

Danny Barash

Keyword(s):

Secondary Structure ◽

Mutation Analysis ◽

Rna Secondary Structure ◽

Analysis Tool

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RNAMute: RNA Secondary Structure Mutation Analysis Tool

2005 IEEE Computational Systems Bioinformatics Conference - Workshops (CSBW'05) ◽

10.1109/csbw.2005.120 ◽

2006 ◽

Author(s):

A. Churkin ◽

O. Elgad ◽

O. Petgho ◽

D. Barash

Keyword(s):

Secondary Structure ◽

Mutation Analysis ◽

Rna Secondary Structure ◽

Analysis Tool

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RNA Secondary Structure Database, Analysis Tool-Set, and Case-Study Results on SARS-CoV-2

10.1109/bibm52615.2021.9669402 ◽

2021 ◽

Author(s):

Abdullah N. Arslan ◽

Mutlu Mete ◽

Anjali Kumari

Keyword(s):

Secondary Structure ◽

Rna Secondary Structure ◽

Analysis Tool ◽

Database Analysis ◽

Structure Database ◽

Study Results ◽

Tool Set

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Improved RNA secondary structure modeling through high-throughput crowdsourced RNA design initiatives

10.26226/morressier.5ebd45acffea6f735881af01 ◽

2020 ◽

Author(s):

Hannah Wayment-Steele

Keyword(s):

Secondary Structure ◽

High Throughput ◽

Rna Secondary Structure ◽

Structure Modeling ◽

Rna Design

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A comprehensive method for visualising RNA secondary structure in standard orientations

10.26226/morressier.5ebd45acffea6f735881aeca ◽

2020 ◽

Author(s):

Blake Sweeney

Keyword(s):

Secondary Structure ◽

Rna Secondary Structure ◽

Comprehensive Method

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Faculty Opinions recommendation of Correlation of RNA secondary structure statistics with thermodynamic stability and applications to folding.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1163637.625403 ◽

2009 ◽

Author(s):

Nathan Baker

Keyword(s):

Secondary Structure ◽

Thermodynamic Stability ◽

Rna Secondary Structure

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Faculty Opinions recommendation of 19F NMR spectroscopy for the analysis of RNA secondary structure populations.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.2333956.1960054 ◽

2010 ◽

Author(s):

Sabine Müller

Keyword(s):

Nmr Spectroscopy ◽

Secondary Structure ◽

Rna Secondary Structure ◽

19F Nmr ◽

19F Nmr Spectroscopy

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Faculty Opinions recommendation of Genome-wide measurement of RNA secondary structure in yeast.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.5187965.7487056 ◽

2010 ◽

Author(s):

Anuj Kumar ◽

Cole Johnson

Keyword(s):

Secondary Structure ◽

Rna Secondary Structure ◽

Genome Wide

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Faculty Opinions recommendation of COFOLD: an RNA secondary structure prediction method that takes co-transcriptional folding into account.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.718010599.793476797 ◽

2013 ◽

Author(s):

Scott Silverman

Keyword(s):

Secondary Structure ◽

Structure Prediction ◽

Rna Secondary Structure ◽

Secondary Structure Prediction ◽

Prediction Method ◽

Rna Secondary Structure Prediction ◽

Structure Prediction Method ◽

Secondary Structure Prediction Method

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A Discrete Hopfield Neural Network Based MIS Finding Algorithm for Stems Selecting and Its Application in RNA Secondary Structure Prediction

Chinese Journal of Computers ◽

10.3724/sp.j.1016.2008.00051 ◽

2009 ◽

Vol 31 (1) ◽

pp. 51-58

Author(s):

Qi LIU ◽

Yin ZHANG ◽

Xiu-Zi YE ◽

Rong-Dong YU

Keyword(s):

Neural Network ◽

Secondary Structure ◽

Structure Prediction ◽

Rna Secondary Structure ◽

Secondary Structure Prediction ◽

Hopfield Neural Network ◽

Rna Secondary Structure Prediction

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Human Immunodeficiency Virus Rev Protein Recognizes a Target Sequence in Rev-Responsive Element RNA within the Context of RNA Secondary Structure

Journal of Virology ◽

10.1128/jvi.66.2.1288-1288.1992 ◽

1992 ◽

Vol 66 (2) ◽

pp. 1288-1288

Keyword(s):

Human Immunodeficiency Virus ◽

Secondary Structure ◽

Rna Secondary Structure ◽

Target Sequence ◽

Immunodeficiency Virus ◽

Responsive Element ◽

Rev Protein

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