N-Methylanilinocyanoacrylate Photosystem II Inhibitors. Structure-Activity Relationships

1993 ◽  
Vol 48 (3-4) ◽  
pp. 136-139 ◽  
Author(s):  
Wendy K. Banham ◽  
John L. Huppatz ◽  
John N . Phillips

Abstract Many 3-N-methylanilino cyanoacrylate derivatives are potent inhibitors of photosynthetic electron transport at the PS II level in a thylakoid system isolated from Pisum sativum. These inhibitors are somewhat unusual in that they take more than 15 min to equilibrate with the binding site in contrast to most classical PS II inhibitors which tend to equilibrate rapidly i.e. within the mixing time of seconds. The effects of mono-and disubstituents in the aryl nucleus on inhibitory activity were studied. The nature and position of the substituent had no detectable influence on equilibration rate but a pronounced influence on inhibitory activity as measured by equilibrium pI50 values. Substituent position enhanced inhibitory activity in the order 3′ > 2′ ⋙ 4′ . As regards the nature of the substituent, size appeared to be the most important parameter -the smaller the substituent the greater the activity. Such influences were in contrast to those in analogous 3-anilino-and 3-benzylamino-2-cyano-acrylate series where the comparable order of substituent position effect was 3′ and 4′ ⋙ 2′ and where substituent hydro-phobicity rather than size was the most important factor. Disubstituted fluoro derivatives have given interesting insights into the preferred orientation of these inhibitors at the binding site with the 2′-and 5′-positions interacting positively, the 4′-position, negatively, and the 3′-position neutrally.

1993 ◽  
Vol 48 (3-4) ◽  
pp. 140-145 ◽  
Author(s):  
John L. Huppatz ◽  
Helen G. McFadden

Abstract For thirty years the study of Quantitative Structure Activity Relationships (QSAR) has been an active area of research aimed at developing an understanding of the interactions be­ tween inhibitors of photosynthetic electron transport and the herbicide binding site in the Photosystem II (PS II) reaction centre. Many QSAR studies of PS II inhibitors with diverse chemical structures have emphasized the hydrophobic nature of the binding domain, with lipophilicity being the dominant determinant of Hill inhibition activity. The cyanoacrylate classes of PS II inhibitors also show a diversity of active structures and considerable variation in inhibition potency with minor alterations to structure. QSAR analysis and examination of chirality in cyanoacrylate inhibitors has also shown the importance of steric factors in determining activity. Different modes of binding for different classes of cyanoacrylates have been identified; a classical urea-type relationship between activity and hydrophobicity and another type of interaction in which the lipophilicity or electronic nature of phenyl substituents plays little part and the size of the substituents is of primary importance. Because size and shape are parameters of great importance in determining the topography of a binding site, QSAR studies of flexible PS II inhibitors such as cyanoacrylates will continue to be important in elucidating the intricacies of inhibitor/PS II interactions.


1993 ◽  
Vol 48 (3-4) ◽  
pp. 163-167
Author(s):  
Koichi Yoneyama ◽  
Yoshihiro Nakajima ◽  
Masaru Ogasawara ◽  
Hitoshi Kuramochi ◽  
Makoto Konnai ◽  
...  

Abstract Through the studies on structure-activity relationships of 5-acyl-3-(1-aminoalkylidene)-4-hydroxy-2 H-pyran-2,6(3 H)-dione derivatives in photosystem II (PS II) inhibition, overall lipophilicity of the molecule was found to be a major determinant for the activity. In the substituted N -benzyl derivatives, not only the lipophilicity but also the electronic and steric characters of the substituents greatly affected the activity. Their mode of PS II inhibition seemed to be similar to that of DCMU , whereas pyran-enamine derivatives needed to be highly lipophilic to block the electron transport in thylakoid membranes, which in turn diminished the permeability through biomembranes.


1991 ◽  
Vol 46 (1-2) ◽  
pp. 93-98 ◽  
Author(s):  
Helen G. McFadden ◽  
Donald C. Craig ◽  
John L. Huppatz ◽  
John N. Phillips

Abstract X-ray crystallographic data for the highly potent cyanoacrylate photosynthetic electron transport inhibitor, (Z)-ethoxyethyl 3-(4-chlorobenzylamino)-2-cyano-4-methylpent-2-enoate, are presented. This compound has a particularly high affinity for the photosystem II (PS II) herbicide receptor with a p I50 value of 9.5 (in the Hill reaction under uncoupled condi­tions with a chlorophyll concentration of 0.1 μg/ml). Data regarding the structure of small li­gands, such as this potent cyanoacrylate, which bind to the site with high affinity may be used to provide the basis for modelling studies of PS II/herbicide complexes. The X-ray data presented confirm the Z-stereochemistry of active cyanoacrylates and demonstrate the pres­ence of a planar core stabilized by an intramolecular hydrogen bond between the ester car­bonyl oxygen and a benzylamino hydrogen atom. In order to assess the importance of the benzylamino -NH -group in this type of cyanoacrylate, analogues containing a methylene group in its place were synthesized and found to be 100-and 1000-fold less active as Hill inhibitors.


1993 ◽  
Vol 48 (3-4) ◽  
pp. 152-158 ◽  
Author(s):  
Tadao Asami ◽  
Masatoshi Baba ◽  
Hiroyuki Koike ◽  
Yorinao Inoue ◽  
Shigeo Yoshida

Abstract A range of 4-hydroxypyridines were synthesized and their activity as PET inhibitors were investigated with regard to their structural resemblance to plastoquinone in photosynthetic electron transport (PET). The activity of these compounds was markedly enhanced upon modifying their structures: introduction of halogens into both the 3-and 5-positions of the pyridine ring and additional substitution at the α-position of the side chain at 6-position were effective among others in enhancing the activity. Insertion of a phenyl ring into the side chain at 6-position of the pyridine ring also increased the activity. Substituents on the phenyl ring greatly affected the activity: when substituted with an appropriate functional group, the compounds became 10-to 100-fold more active. The mode of action of both halogenated and non-halogenated 4-hydroxypyridines were investigated by means of thermoluminescence measurements and cross resistance examination against atrazine-resistant thylakoids having mutation in D 1 protein. It was inferred that upon halogenation, 4-hydroxypyridines changed their mode of action from plastoquinone-pool inhibitors to phenol-type inhibitors.


1980 ◽  
Vol 35 (3-4) ◽  
pp. 293-297 ◽  
Author(s):  
P. V. Sane ◽  
Udo Johanningmeier

Abstract Low concentrations (10 µM) of tetranitromethane inhibit noncyclic electron transport in spinach chloroplasts. A study of different partial electron transport reactions shows that tetranitromethane primarily interferes with the electron flow from water to PS II. At higher concentrations the oxidation of plastohydroquinone is also inhibited. Because diphenyl carbazide but not Mn2+ ions can donate electrons efficiently to PS II in the presence of tetranitromethane it is suggested that it blocks the donor side of PS II prior to donation of electrons by diphenyl carbazide. The pH dependence of the inhibition by this protein modifying reagent may indicate that a functional-SH group is essential for a protein, which mediates electron transport between the water splitting complex and the reaction center of PS II.


1990 ◽  
Vol 45 (5) ◽  
pp. 317-321 ◽  
Author(s):  
Koichi Yoneyama ◽  
Makoto Konnai ◽  
Ichiro Honda ◽  
Shigeo Yoshida ◽  
Nobutaka Takahashi ◽  
...  

Studies on structure/activity relationships of phloroglucinol derivatives that had been designed based on the structures of grandinol and homograndinol. potent photosystem II (PS II) inhibitors in Eucalyptus grandis, revealed that two electron-withdrawing groups which differ by their electron-withdrawing power on a phloroglucinol nucleus were essential for activity. A larger difference in the electron-withdrawing power between the two groups enhanced the activity, and 3-nitro-phloroglucinecarboxamides and the corresponding thioamides were the most active ones when they had proper lipophilic side chains. Their binding domain seems to overlap with those of DCMU and atrazine, whereas they may approach to the site in a similar manner to that of phenol type inhibitors. Accordingly, the phloroglucinol derivatives represent a new type of PS II inhibitors.


1981 ◽  
Vol 36 (7-8) ◽  
pp. 645-655 ◽  
Author(s):  
Klaus Pfister ◽  
Hartmut K. Lichtenthaler ◽  
Günther Burger ◽  
Hans Musso ◽  
Manuel Zahn

Abstract Halogenated naphthoquinones act as inhibitors of photosynthetic electron flow. I50 concentra­ tion for inhibition of methylviologen reduction were found to range between 2 × 10-5 m to 2 × 10-6 M. Comparing their effects on several partial reactions of electron flow, the inhibition site of the naphthoquinones was found to be at the reducing site of PS II. Studies of fluorescence transients in presence of halogenated naphthoquinones give further evidence for a site action similar to that of diuron and different to that of DBMIB. All naphthoquinones act as quenchers of chlorophyll fluorescence with pure chlorophyll a, and with much higher efficiency in green algae and chloroplasts. It is concluded, that the halogenated naphthoquinones act similar to PS II-inhibitors like diuron, but do not share a common binding site at the PS II-complex. Implications of a possible involvement of phylloquinone K 1 in photosynthetic electron transport are discussed. The synthesis of 2-chloro-as well as 2-bromo-3-isopropyl-1,4-naphthoquinone is described.


1978 ◽  
Vol 33 (9-10) ◽  
pp. 695-703 ◽  
Author(s):  
Walter Oettmeier ◽  
Susanne Reimer ◽  
Klaus Link

Abstract 1.4-benzoquinones have been tested for their inhibitory activity on photosynthetic NADP+ reduction by chloroplasts. Benzoquinones with one or two branched alkyl side chains are inhibitors of electron flow. Inhibitory activity can be highly increased if one - and even more if two - halogen substitutents are introduced into the quinone moiety. Iodine substitution yields a better inhibitor than bromine than chlorine. A quantitative structure activity relationship according to a bilinear model, as developed by Kubinyi, with the lipophilicity as the only parameter could be established.


2014 ◽  
Vol 2014 ◽  
pp. 1-11 ◽  
Author(s):  
Ales Imramovsky ◽  
Jan Kozic ◽  
Matus Pesko ◽  
Jirina Stolarikova ◽  
Jarmila Vinsova ◽  
...  

A series of twelve 2-[(E)-2-substituted-ethenyl]-1,3-benzoxazoles was designed. All the synthesized compounds were tested against three mycobacterial strains. The compounds were also evaluated for their ability to inhibit photosynthetic electron transport (PET) in spinach (Spinacia oleraceaL.) chloroplasts. 2-[(E)-2-(4-Methoxyphenyl)ethenyl]-1,3-benzoxazole, 2-[(E)-2-(2,3-dihydro-1-benzofuran-5-yl)ethenyl]-1,3-benzoxazole and 2-{(E)-2-[4-(methylsulfanyl)phenyl]ethenyl}-1,3-benzoxazole showed the highest activity againstM. tuberculosis,M. kansasii,andM. avium, and they demonstrated significantly higher activity againstM. aviumandM. kansasiithan isoniazid. The PET-inhibiting activity of the most activeortho-substituted compound 2-[(E)-2-(2-methoxyphenyl)ethenyl]-1,3-benzoxazole was IC50= 76.3 μmol/L, while the PET-inhibiting activity ofpara-substituted compounds was significantly lower. The site of inhibitory action of tested compounds is situated on the donor side of photosystem II. The structure-activity relationships are discussed.


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