Top-down proteomics data analysis on the NRTDP TDPortal v1 (protocols.io.bnicmcaw)

protocols.io ◽  
2020 ◽  
Author(s):  
Jeannie Camarillo ◽  
Neil Kelleher
Keyword(s):  
Data Analysis ◽  
Proteomics Data ◽  
Top Down ◽  
Proteomics Data Analysis

scholarly journals Enhancing Top-Down Proteomics Data Analysis by Combining Deconvolution Results through a Machine Learning Strategy

2020 ◽  
Vol 31 (5) ◽  
pp. 1104-1113 ◽  
Author(s):  
Sean J. McIlwain ◽  
Zhijie Wu ◽  
Molly Wetzel ◽  
Daniel Belongia ◽  
Yutong Jin ◽  
...  
Keyword(s):  
Machine Learning ◽  
Data Analysis ◽  
Learning Strategy ◽  
Proteomics Data ◽  
Top Down ◽  
Proteomics Data Analysis

Bottom up proteomics data analysis strategies to explore protein modifications and genomic variants

PROTEOMICS ◽  
2015 ◽  
Vol 15 (11) ◽  
pp. 1789-1792 ◽  
Author(s):  
Ana Sofia Carvalho ◽  
Deborah Penque ◽  
Rune Matthiesen
Keyword(s):  
Data Analysis ◽  
Proteomics Data ◽  
Bottom Up ◽  
Protein Modifications ◽  
Genomic Variants ◽  
Analysis Strategies ◽  
Proteomics Data Analysis

scholarly journals Using the entrapment sequence method as a standard to evaluate key steps of proteomics data analysis process

BMC Genomics ◽  
2017 ◽  
Vol 18 (S2) ◽  
Author(s):  
Xiao-dong Feng ◽  
Li-wei Li ◽  
Jian-hong Zhang ◽  
Yun-ping Zhu ◽  
Cheng Chang ◽  
...  
Keyword(s):  
Data Analysis ◽  
Proteomics Data ◽  
Analysis Process ◽  
Sequence Method ◽  
Key Steps ◽  
Proteomics Data Analysis

scholarly journals Philosopher: a versatile toolkit for shotgun proteomics data analysis

2020 ◽  
Vol 17 (9) ◽  
pp. 869-870 ◽  
Author(s):  
Felipe da Veiga Leprevost ◽  
Sarah E. Haynes ◽  
Dmitry M. Avtonomov ◽  
Hui-Yin Chang ◽  
Avinash K. Shanmugam ◽  
...  
Keyword(s):  
Data Analysis ◽  
Shotgun Proteomics ◽  
Proteomics Data ◽  
Proteomics Data Analysis

EasyProt — An easy-to-use graphical platform for proteomics data analysis

2013 ◽  
Vol 79 ◽  
pp. 146-160 ◽  
Author(s):  
Florent Gluck ◽  
Christine Hoogland ◽  
Paola Antinori ◽  
Xavier Robin ◽  
Frederic Nikitin ◽  
...  
Keyword(s):  
Data Analysis ◽  
Proteomics Data ◽  
Proteomics Data Analysis
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