3D0948 Application of CS-PCA (Chemical shift-principle component analysis) to the NMR data on a multiple-ligand-binding system(3D Protein: Structure & Function 2,The 49th Annual Meeting of the Biophysical Society of Japan)

Kazumasa Sakurai; Tsuyoshi Konuma; Yuji Goto

doi:10.2142/biophys.51.s117_4

3D0948 Application of CS-PCA (Chemical shift-principle component analysis) to the NMR data on a multiple-ligand-binding system(3D Protein: Structure & Function 2,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s117_4 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S117

Author(s):

Kazumasa Sakurai ◽

Tsuyoshi Konuma ◽

Yuji Goto

Keyword(s):

Protein Structure ◽

Chemical Shift ◽

Ligand Binding ◽

Structure Function ◽

Annual Meeting ◽

Principle Component Analysis ◽

3D Protein Structure ◽

Nmr Data ◽

Biophysical Society ◽

Multiple Ligand

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3D1012 Protein-ligand binding simulation with a coarse-graind force field, MARTINI(3D Protein: Structure & Function 2,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s117_5 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S117-S118

Author(s):

Tatsuki Negami ◽

Tohru Terada ◽

Kentaro Shimizu

Keyword(s):

Protein Structure ◽

Ligand Binding ◽

Force Field ◽

Structure Function ◽

Annual Meeting ◽

3D Protein Structure ◽

Biophysical Society

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3D1422 Prepared domain orientation of tandem HMG boxes defined by the inter-domain linker in HMGB2(3D Protein: Structure & Function 3,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s120_1 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S120

Author(s):

Jun-ichi Uewaki ◽

Jun-ichi Kurita ◽

Naoko Utsunomiya-Tate ◽

Shin-ichi Tate

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

3D Protein Structure ◽

Domain Orientation ◽

Biophysical Society

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3D1124 Simulation study of transmission mechanism of allosteric interaction(3D Protein: Structure & Function 2,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s118_5 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S118

Author(s):

Ikuo Kurisaki ◽

Masayoshi Takayanagi ◽

Masataka Nagaoka

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Simulation Study ◽

Transmission Mechanism ◽

3D Protein Structure ◽

Allosteric Interaction ◽

Biophysical Society

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3D1534 Detection of genetic heavy metal-labeled light chain 4 by electron cryo-tomography(3D Protein: Structure & Function 3,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s121_1 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S121

Author(s):

Mingyue Jin ◽

Haru-aki Yanagisawa ◽

Kotaro Koyasako ◽

Ritsu Kamiya ◽

Kota Mayanagi ◽

...

Keyword(s):

Heavy Metal ◽

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Light Chain ◽

3D Protein Structure ◽

Biophysical Society

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3D1546 Cofilin changes the twisting of actin filaments(3D Protein: Structure & Function 3,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s121_2 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S121

Author(s):

Shotaro Sakakibara ◽

Kimihide Hayakawa ◽

Hitoshi Tatsumi ◽

Masahiro Sokabe

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Actin Filaments ◽

3D Protein Structure ◽

Biophysical Society

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3D1048 Analysis of relationship among evolvability, thermodynamic characteristics and function of intrinsically disordered proteins/regions(3D Protein: Structure & Function 2,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s118_3 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S118

Author(s):

He Huang ◽

Akinori Sarai

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Intrinsically Disordered Proteins ◽

Thermodynamic Characteristics ◽

Disordered Proteins ◽

3D Protein Structure ◽

Intrinsically Disordered ◽

Biophysical Society ◽

And Function

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3D1148 Conformational change reproduced by a linear combination of displacement vectors obtained from normal mode analysis(3D Protein: Structure & Function 2,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s119_1 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S119

Author(s):

Hiroshi Wako ◽

Shigeru Endo

Keyword(s):

Protein Structure ◽

Structure Function ◽

Linear Combination ◽

Annual Meeting ◽

Normal Mode ◽

Normal Mode Analysis ◽

Mode Analysis ◽

3D Protein Structure ◽

Displacement Vectors ◽

Biophysical Society

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3D1434 P18 The Survival strategy in bacteria under the starvation stress(3D Protein: Structure & Function 3,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s120_2 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S120

Author(s):

Takayuki Kato ◽

Masami Ueta ◽

Tomoko Miyata ◽

Hideji Yoshida ◽

Yasushi Maki ◽

...

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Survival Strategy ◽

Starvation Stress ◽

3D Protein Structure ◽

Biophysical Society

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3D1610 Actin capping protein and its inhibitor CARMIL : how intrinsically disordered regions function(3D Protein: Structure & Function 3,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s121_4 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S121

Author(s):

Shuichi Takeda ◽

Ryotaro Koike ◽

Yasushi Nitanai ◽

Shiho Minakata ◽

Yuichiro Maeda ◽

...

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

3D Protein Structure ◽

Capping Protein ◽

Intrinsically Disordered ◽

Intrinsically Disordered Regions ◽

Biophysical Society ◽

Actin Capping Protein ◽

Actin Capping

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3D1346 Circadian fluctuation of intrinsic tryptophan fluorescence of cyanobacterial clock protein KaiC(3D Protein: Structure & Function 3,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s119_4 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S119

Author(s):

Shuji Akiyama ◽

Atsushi Mukaiyama ◽

Takao Kondo

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Tryptophan Fluorescence ◽

3D Protein Structure ◽

Intrinsic Tryptophan Fluorescence ◽

Biophysical Society ◽

Circadian Fluctuation ◽

Clock Protein

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