scholarly journals Development of loop-mediated isothermal amplification (LAMP) assay combined with malachite green as a rapid screening test for Candidatus Mycoplasma haemominutum infection in cats

ScienceAsia ◽  
2017 ◽  
Vol 43 (6) ◽  
pp. 354
Author(s):  
Sarunya Tedlongthong ◽  
Nareerat Viseshakul ◽  
Hirotomo Kato ◽  
Supatra Areekit ◽  
Somchai Santiwatanakul ◽  
...  
2017 ◽  
Vol 9 (45) ◽  
pp. 6403-6410 ◽  
Author(s):  
Sirirat Wachiralurpan ◽  
Thayat Sriyapai ◽  
Supatra Areekit ◽  
Pichapak Sriyapai ◽  
Dueantem Thongphueak ◽  
...  

A rapid and specific,hly-based, loop-mediated isothermal amplification (LAMP) was applied for the detection ofListeria monocytogenesin food samples using LAMP-turbidity.


2018 ◽  
Vol 38 (5) ◽  
Author(s):  
Rungong Yang ◽  
Honghong Zhang ◽  
Xiaoxia Li ◽  
Ling Ye ◽  
Meiliang Gong ◽  
...  

Background: Acinetobacter baumannii is a health burden responsible for various nosocomial infections, and bacteremia in particular. The resistance of A. baumannii to most antibiotics including carbapenem has increased. OXA-23-producing A. baumannii is the chief source of nosocomial outbreaks with carbapenem-resistant A. baumannii. Successful antibiotic treatment relies on the accurate and rapid identification of infectious agents and drug resistance. Here, we describe a multiplex loop-mediated isothermal amplification (LAMP) assay for simultaneous and homogeneous identification for A. baumannii infection screening and drug-resistance gene detection. Methods: Four primer pairs were designed to amplify fragments of the recA gene of A. baumannii and the oxa-23 gene. The reaction with a 25 μl of final volume was performed at 63°C for 60 min. For comparative purposes, we used a traditional method of bacterial identification to evaluate assay efficacy. Results: The multiplex LAMP assay enables simultaneous and homogeneous detection of the recA gene of A. baumannii and the oxa-23 gene and requires less than 21 min with no pre-requisite for DNA purification prior to the amplification reaction. The detection is specific to A. baumannii, and the coincidence rate of the multiplex LAMP and the traditional method was 100%. Conclusions: Our data indicate that the multiplex LAMP assay is a rapid, sensitive, simultaneous and homogeneous method for screening of A. baumannii and its drug-resistance gene.


1970 ◽  
Vol 102 (2) ◽  
pp. 237-237
Author(s):  
R. M. McDonald

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Somayyeh Sedaghatjoo ◽  
Monika K. Forster ◽  
Ludwig Niessen ◽  
Petr Karlovsky ◽  
Berta Killermann ◽  
...  

AbstractTilletia controversa causing dwarf bunt of wheat is a quarantine pathogen in several countries. Therefore, its specific detection is of great phytosanitary importance. Genomic regions routinely used for phylogenetic inferences lack suitable polymorphisms for the development of species-specific markers. We therefore compared 21 genomes of six Tilletia species to identify DNA regions that were unique and conserved in all T. controversa isolates and had no or limited homology to other Tilletia species. A loop-mediated isothermal amplification (LAMP) assay for T. controversa was developed based on one of these DNA regions. The specificity of the assay was verified using 223 fungal samples comprising 43 fungal species including 11 Tilletia species, in particular 39 specimens of T. controversa, 92 of T. caries and 40 of T. laevis, respectively. The assay specifically amplified genomic DNA of T. controversa from pure cultures and teliospores. Only Tilletia trabutii generated false positive signals. The detection limit of the LAMP assay was 5 pg of genomic DNA per reaction. A test performance study that included five laboratories in Germany resulted in 100% sensitivity and 97.7% specificity of the assay. Genomic regions, specific to common bunt (Tilletia caries and Tilletia laevis together) are also provided.


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