scholarly journals PQQ-Aza-Crown Ether Complexes as Biomimetics for Lanthanide and Calcium Dependent Alcohol Dehydrogenases

Author(s):  
Violeta A. Vetsova ◽  
Katherine R. Fisher ◽  
Henning Lumpe ◽  
Alexander Schäfer ◽  
Erik K. Schneider ◽  
...  

<div>Understanding the role of metal ions in biology can lead to the development of new catalysts for</div><div>several industrially important transformations. Lanthanides are the most recent group of metal ions</div><div>that have been shown to be important in biology i.e. - in quinone-dependent methanol</div><div>dehydrogenases (MDH). Here we evaluate a pyrroloquinoline quinone and 1-aza-15-crown-5 based</div><div>ligand platform as scaffold for Ca2+ , Ba2+ , La3+ and Lu3+ biomimetics of MDH and we evaluate the</div><div>importance of ligand design, charge, size, counterions and base for the alcohol oxidation reaction</div><div>using NMR spectroscopy. In addition, we report a new straightforward synthetic route (3 steps</div><div>instead of 11 and 33% instead of 0.6% yield) for biomimetic ligands based on PQQ. We show that</div><div>when studying biomimetics for MDH, larger metal ions and those with lower charge in this case</div><div>promote the dehydrogenation reaction more effectively and that this is likely an effect of the ligand</div><div>design which must be considered when studying biomimetics. To gain more information on the</div><div>structures and impact of counterions of the complexes, we performed collision induced dissociation</div><div>(CID) experiments and observe that the nitrates are more tightly bound than the triflates. To resolve</div><div>the structure of the complexes in the gas phase we combined DFT-calculations and ion mobility</div><div>measurements (IMS). Furthermore, we characterized the obtained complexes and reaction mixtures</div><div>using Electron Paramagnetic Resonance (EPR) spectroscopy and show the emergence of a quinone-</div><div>based radical during the reaction with substrate and base.</div>

2021 ◽  
Author(s):  
Violeta A. Vetsova ◽  
Katherine R. Fisher ◽  
Henning Lumpe ◽  
Alexander Schäfer ◽  
Erik K. Schneider ◽  
...  

<div>Understanding the role of metal ions in biology can lead to the development of new catalysts for</div><div>several industrially important transformations. Lanthanides are the most recent group of metal ions</div><div>that have been shown to be important in biology i.e. - in quinone-dependent methanol</div><div>dehydrogenases (MDH). Here we evaluate a pyrroloquinoline quinone and 1-aza-15-crown-5 based</div><div>ligand platform as scaffold for Ca2+ , Ba2+ , La3+ and Lu3+ biomimetics of MDH and we evaluate the</div><div>importance of ligand design, charge, size, counterions and base for the alcohol oxidation reaction</div><div>using NMR spectroscopy. In addition, we report a new straightforward synthetic route (3 steps</div><div>instead of 11 and 33% instead of 0.6% yield) for biomimetic ligands based on PQQ. We show that</div><div>when studying biomimetics for MDH, larger metal ions and those with lower charge in this case</div><div>promote the dehydrogenation reaction more effectively and that this is likely an effect of the ligand</div><div>design which must be considered when studying biomimetics. To gain more information on the</div><div>structures and impact of counterions of the complexes, we performed collision induced dissociation</div><div>(CID) experiments and observe that the nitrates are more tightly bound than the triflates. To resolve</div><div>the structure of the complexes in the gas phase we combined DFT-calculations and ion mobility</div><div>measurements (IMS). Furthermore, we characterized the obtained complexes and reaction mixtures</div><div>using Electron Paramagnetic Resonance (EPR) spectroscopy and show the emergence of a quinone-</div><div>based radical during the reaction with substrate and base.</div>


2010 ◽  
Vol 39 (3) ◽  
pp. 215-223 ◽  
Author(s):  
Alfonso Zoleo ◽  
Daria Confortin ◽  
Nicola Dal Mina ◽  
Marina Brustolon

2018 ◽  
Vol 4 (4) ◽  
pp. 55 ◽  
Author(s):  
Giuseppe Sciortino ◽  
Giuseppe Lubinu ◽  
Jean-Didier Maréchal ◽  
Eugenio Garribba

With the aim to provide a general protocol to interpret electron paramagnetic resonance (EPR) spectra of paramagnetic copper(II) coordination compounds, density functional theory (DFT) calculations of spin Hamiltonian parameters g and A for fourteen Cu(II) complexes with different charges, donor sets, and geometry were carried out using ORCA software. The performance of eleven functionals was tested, and on the basis of the mean absolute percent deviation (MAPD) and standard deviation (SD), the ranking of the functionals for Az is: B3LYP > B3PW91 ~ B3P86 > PBE0 > CAM-B3LYP > TPSSh > BH and HLYP > B2PLYP > MPW1PW91 > ω-B97x-D >> M06; and for gz is: PBE0 > BH and HLYP > B2PLYP > ω-B97x-D > B3PW91~B3LYP~B3P86 > CAM-B3LYP > TPSSh~MPW1PW91 >> M06. With B3LYP the MAPD with respect to A z exp t l is 8.6% with a SD of 4.2%, while with PBE0 the MAPD with respect to g z exp t l is 2.9% with a SD of 1.1%. The results of the validation confirm the fundamental role of the second order spin-orbit contribution to Az. The computational procedure was applied to predict the values of gz and Az of the adducts formed by Cu(II) with albumin and two fragments of prion protein, 106–126 and 180–193.


The gas-phase paramagnetic resonance spectrum of NF in the J = 2 rotational level of the 1 ∆ state has been studied, and the dipole moment in this state is found to be 0.37 ± 0.60D. The rotational constant previously determined from the electronic spectrum is shown to be consistent with the electron resonance results, and the 14 N quadrupole coupling constant e 2 qQ is 4.1 ± 0.2 MHz. The hyperfine coupling constants of the 14 N and 19 F nuclei are + 109.92 ± 0.14 and +758.06 ± 0.23 MHz respectively.


Author(s):  
Alfonso Zoleo ◽  
Laura Speri ◽  
Maddalena Bronzato

AbstractElectron Paramagnetic Resonance (EPR) is a technique devoted to the identification and characterization of paramagnetic species, i.e. chemical species with unpaired electrons. Very common paramagnetic species which can be detected through EPR in historic paper are Fe(III), Mn(II), Cu(II) ions and radicals, where Fe(III), Cu(II) and radicals play a relevant role in paper degradation. Specifically, Fe(III) is almost ubiquitous in historic paper. Here we propose an overview of the EPR signals in historic and artificially aged paper, and in particular, we would like to show how a deep analysis of EPR signals from paper could provide useful information about the paper’s origin and unique indications of the degradation and oxidation level of the paper.


2003 ◽  
Vol 285 (4) ◽  
pp. G747-G753 ◽  
Author(s):  
Catalina Caballero-Alomar ◽  
Carmen Santos ◽  
Diego Lopez ◽  
M. Teresa Mitjavila ◽  
Pere Puig-Parellada

We examined in vitro the source and role of basal nitric oxide (NO) in proximal segments of guinea pig taenia caeci in nonadrenergic, noncholinergic (NANC) conditions. Using electron paramagnetic resonance (EPR), we measured the effect of the NO synthase inhibitor NG-nitro-l-arginine methyl ester (l-NAME, 10–4 M), the neuronal blocker tetrodotoxin (TTX, 10–6 M), or both on spontaneous contractions and on the production of basal NO. Both l-NAME and TTX, when tested alone, increased the amplitude and frequency of contractions. NO production was abolished by l-NAME and was inhibited by 38% by TTX. When tested together, l-NAME in the presence of TTX or TTX in the presence of l-NAME had no further effect on the amplitude or frequency of spontaneous contractions, and the NO production was inhibited. These findings suggest that basal NO consists of TTX-sensitive and TTX-resistant components. The TTX-sensitive NO has an inhibitory effect on spontaneous contractions; the role of TTX-resistant NO is unknown.


Sign in / Sign up

Export Citation Format

Share Document