Differential expression of platelet-derived growth factor D in cancers of the breast.
Breast cancer affects women at relatively high frequency (1). We mined published microarray datasets (2, 3) to determine in an unbiased fashion and at the systems level genes most differentially expressed in the primary tumors of patients with breast cancer. We report here significant differential expression of the gene encoding platelet-derived growth factor D, PDGFD, when comparing primary tumors of the breast to the tissue of origin, the normal breast. PDGFD was also differentially expressed in the tumor cells of patients with triple negative breast cancer. PDGFD mRNA was present at significantly lower quantities in tumors of the breast as compared to normal breast tissue. Analysis of human survival data revealed that expression of PDGFD in primary tumors of the breast was correlated with overall survival in patients with basal and luminal A subtype cancer, demonstrating a relationship between primary tumor expression of a differentially expressed gene and patient survival outcomes influenced by molecular subtype. PDGFD may be of relevance to initiation, maintenance or progression of cancers of the female breast.