scholarly journals Impact of the eastern oyster Crassostrea virginica on microbial community structure in a salt marsh estuary

2002 ◽  
Vol 28 ◽  
pp. 87-97 ◽  
Author(s):  
MS Wetz ◽  
AJ Lewitus ◽  
ET Koepfler ◽  
KC Hayes
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Salt Marsh ◽  
Crassostrea Virginica ◽  
Microbial Community Structure ◽  
Eastern Oyster

Salt marsh pore water geochemistry does not correlate with microbial community structure

2005 ◽  
Vol 62 (1-2) ◽  
pp. 233-251 ◽  
Author(s):  
Carla M. Koretsky ◽  
Philippe Van Cappellen ◽  
Thomas J. DiChristina ◽  
Joel E. Kostka ◽  
Kristi L. Lowe ◽  
...  
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Salt Marsh ◽  
Pore Water ◽  
Microbial Community Structure ◽  
Water Geochemistry ◽  
Pore Water Geochemistry

scholarly journals Functional plasticity in oyster gut microbiomes along a eutrophication gradient in an urbanized estuary

2021 ◽  
Vol 3 (1) ◽  
Author(s):  
Rebecca J. Stevick ◽  
Anton F. Post ◽  
Marta Gómez-Chiarri
Keyword(s):  
Climate Change ◽  
Community Structure ◽  
Ecosystem Services ◽  
Microbial Community ◽  
Bacterial Community ◽  
Microbial Community Structure ◽  
Environmental Conditions ◽  
Eastern Oyster ◽  
Coastal Pollution ◽  
And Function

Abstract Background Oysters in coastal environments are subject to fluctuating environmental conditions that may impact the ecosystem services they provide. Oyster-associated microbiomes are responsible for some of these services, particularly nutrient cycling in benthic habitats. The effects of climate change on host-associated microbiome composition are well-known, but functional changes and how they may impact host physiology and ecosystem functioning are poorly characterized. We investigated how environmental parameters affect oyster-associated microbial community structure and function along a trophic gradient in Narragansett Bay, Rhode Island, USA. Adult eastern oyster, Crassostrea virginica, gut and seawater samples were collected at 5 sites along this estuarine nutrient gradient in August 2017. Samples were analyzed by 16S rRNA gene sequencing to characterize bacterial community structures and metatranscriptomes were sequenced to determine oyster gut microbiome responses to local environments. Results There were significant differences in bacterial community structure between the eastern oyster gut and water samples, suggesting selection of certain taxa by the oyster host. Increasing salinity, pH, and dissolved oxygen, and decreasing nitrate, nitrite and phosphate concentrations were observed along the North to South gradient. Transcriptionally active bacterial taxa were similar for the different sites, but expression of oyster-associated microbial genes involved in nutrient (nitrogen and phosphorus) cycling varied throughout the Bay, reflecting the local nutrient regimes and prevailing environmental conditions. Conclusions The observed shifts in microbial community composition and function inform how estuarine conditions affect host-associated microbiomes and their ecosystem services. As the effects of estuarine acidification are expected to increase due to the combined effects of eutrophication, coastal pollution, and climate change, it is important to determine relationships between host health, microbial community structure, and environmental conditions in benthic communities.

Microbial community structure and dynamics in restored subtropical seagrass sediments

2015 ◽  
Vol 74 (1) ◽  
pp. 43-57 ◽  
Author(s):  
AS Bourque ◽  
R Vega-Thurber ◽  
JW Fourqurean
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microbial Community Structure ◽  
Structure And Dynamics

Effects of resuspension of eastern oyster Crassostrea virginica biodeposits on phytoplankton community structure

2020 ◽  
Vol 640 ◽  
pp. 79-105
Author(s):  
ET Porter ◽  
E Robins ◽  
S Davis ◽  
R Lacouture ◽  
JC Cornwell
Keyword(s):  
Water Quality ◽  
Community Structure ◽  
Crassostrea Virginica ◽  
Skeletonema Costatum ◽  
Eastern Oyster ◽  
Energy Dissipation Rate ◽  
Negative Effects ◽  
Cell Densities ◽  
Sediment Bottom ◽  
Nitrite Nitrate

Anthropogenic disturbances in the Chesapeake Bay (USA) have depleted eastern oyster Crassostrea virginica abundance and altered the estuary’s environment and water quality. Efforts to rehabilitate oyster populations are underway; however, the effect of oyster biodeposits on water quality and plankton community structure are not clear. In July 2017, we used 6 shear turbulence resuspension mesocosms (STURMs) to determine differences in plankton composition with and without the daily addition of oyster biodeposits to a muddy sediment bottom. STURM systems had a volume-weighted root mean square turbulent velocity of 1.08 cm s-1, energy dissipation rate of ~0.08 cm2 s-3, and bottom shear stress of ~0.36-0.51 Pa during mixing-on periods during 4 wk of tidal resuspension. Phytoplankton increased their chlorophyll a content in their cells in response to low light in tanks with biodeposits. The diatom Skeletonema costatum bloomed and had significantly longer chains in tanks without biodeposits. These tanks also had significantly lower concentrations of total suspended solids, zooplankton carbon, and nitrite +nitrate, and higher phytoplankton carbon concentrations. Results suggest that the absence of biodeposit resuspension initiates nitrogen uptake for diatom reproduction, increasing the cell densities of S. costatum. The low abundance of the zooplankton population in non-biodeposit tanks suggests an inability of zooplankton to graze on S. costatum and negative effects of S. costatum on zooplankton. A high abundance of the copepod Acartia tonsa in biodeposit tanks may have reduced S. costatum chain length. Oyster biodeposit addition and resuspension efficiently transferred phytoplankton carbon to zooplankton carbon, thus supporting the food web in the estuary.

The First Use of Biofilm Microbial Community Structure as an Indicator of Impact of Two Dams on the Elwha River (Washington)

2009 ◽  
Vol 27 (4) ◽  
pp. 385-387
Author(s):  
W. D. Eaton ◽  
B. Wilmot ◽  
E. Epler ◽  
S. Mangiamelli ◽  
D. Barry
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microbial Community Structure ◽  
Elwha River
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