scholarly journals Pt(II)-Coordinated Tricomponent Self-Assemblies of Tetrapyridyl Porphyrin and Dicarboxylate Ligands: Are They 3D Prisms or 2D Bow Ties?

Author(s):  
Paola Benavides ◽  
Monica A. Gordillo ◽  
Ashok Yadav ◽  
M. Andrey Joaqui-Joaqui ◽  
Sourav Saha

Thermodynamically favored heteroleptic coordination of Pt(II) ions with one aza- and another oxo-coordinating ligand yield tricomponent supramolecular coordination complexes (SCCs), which possess much greater structural complexity and functional diversity than traditional bicomponent SCCs containing only one of the ligands. Through X-ray crystallography, 1H, 31P, and 2D NMR spectroscopies, mass spectrometry, and computational studies, herein, we demonstrated that heteroleptic coordination of tetrapyridyl porphyrins (MTPP, M = Zn or H2) and various dicarboxylate ligands (XDC) having different lengths and rigidity with cis-(Et3P)2PtII corners yielded bow-tie (⋈)-shaped tricomponent [{cis-(Et3P)2Pt}4(MTPP)(XDC)2]4+ complexes featuring a MTPP core and two parallel XDC linkers held together by four heteroligated PtII(N,O) corners and ruled out the MTPP-based tetragonal prism formation. Irrespective of the rigidity and length of the XDC linkers within a certain range (~7–11 Å), they intramolecularly bridged two adjacent pyridyl tips of an MTPP ligand via PtII(N,O) corners, which led to the formation of bow-tie complexes instead of prisms. This happened because the angles of projection between the adjacent pyridyl rings of MTPP cores adapted to accommodate the bridging XDC linkers having different lengths, and the bow-tie formation was entropically favored over tetragonal prisms. This work not only unveiled novel bow-tie-shaped coordination complexes, but also accurately defined the actual structures and compositions of MTPP-based tricomponent SCCs. Furthermore, a representative bow-tie complex containing an electron-rich ZnTPP core selectively formed a charge-transfer (CT) complex with highly electron deficient 1,4,5,8,9,12-hexaazatriphenylene-2,3,6,7,10,11-heaxacarbonitrile (HATHCN) but not with π-donors like pyrene.

2021 ◽  
Author(s):  
Paola Benavides ◽  
Monica A. Gordillo ◽  
Ashok Yadav ◽  
M. Andrey Joaqui-Joaqui ◽  
Sourav Saha

Thermodynamically favored heteroleptic coordination of one aza- and another oxo-coordinating ligand with Pt(II) ions yield tricomponent supramolecular coordination complexes (SCCs) that have much greater structural complexity and functional diversity than the traditional bicomponent SCCs containing only one of the ligands. Herein, we demonstrate that heteroleptic coordination of tetrapyridyl porphyrins (M¢TPP, M¢ = Zn or H2) and various dicarboxylate ligands (XDC) having different lengths and rigidity with cis- (Et3P)2PtII corners actually yields bow tie (⋈)-shaped tricomponent [{cis-(Et3P)2Pt}4(M¢TPP)(XDC)2] 4+ complexes featuring a M¢TPP core and two parallel XDC linkers held together by four heteroligated PtII(N,O) corners. Although previous reports have claimed that the self-assembly of these three components produced tetragonal prisms having two cofacial M¢TPP planes connected by four XDC linkers via eight PtII(N,O) corners, our extensive 1 H, 31P, and 2D NMR, ESI-MS, X-ray crystallographic, and computational studies unequivocally demonstrated that in reality, no such prism was formed because instead of connecting two cofacial M¢TPP ligands, the XDC linkers actually bridged two adjacent pyridyl termini of an M¢TPP ligand via shared PtII(N,O) corners, forming bow tie complexes. In addition to direct crystallographic evidence, the NMR spectra of these complexes revealed that the M¢TPP ligands contained two distinct pyrrole protons (4 each)—those located inside the triangles were shielded by and coupled to adjacent XDC linkers, whereas the exposed ones were not—an unmistakable sign of their bow tie structures. Thus, this work not only unveiled novel bow tie-shaped coordination complexes, but also accurately defined the actual structures and compositions of M¢TPP-based tricomponent SCCs.


2021 ◽  
Author(s):  
Paola Benavides ◽  
Monica A. Gordillo ◽  
Ashok Yadav ◽  
M. Andrey Joaqui-Joaqui ◽  
Sourav Saha

Thermodynamically favored heteroleptic coordination of one aza- and another oxo-coordinating ligand with Pt(II) ions yield tricomponent supramolecular coordination complexes (SCCs) that have much greater structural complexity and functional diversity than the traditional bicomponent SCCs containing only one of the ligands. Herein, we demonstrate that heteroleptic coordination of tetrapyridyl porphyrins (M¢TPP, M¢ = Zn or H2) and various dicarboxylate ligands (XDC) having different lengths and rigidity with cis- (Et3P)2PtII corners actually yields bow tie (⋈)-shaped tricomponent [{cis-(Et3P)2Pt}4(M¢TPP)(XDC)2] 4+ complexes featuring a M¢TPP core and two parallel XDC linkers held together by four heteroligated PtII(N,O) corners. Although previous reports have claimed that the self-assembly of these three components produced tetragonal prisms having two cofacial M¢TPP planes connected by four XDC linkers via eight PtII(N,O) corners, our extensive 1 H, 31P, and 2D NMR, ESI-MS, X-ray crystallographic, and computational studies unequivocally demonstrated that in reality, no such prism was formed because instead of connecting two cofacial M¢TPP ligands, the XDC linkers actually bridged two adjacent pyridyl termini of an M¢TPP ligand via shared PtII(N,O) corners, forming bow tie complexes. In addition to direct crystallographic evidence, the NMR spectra of these complexes revealed that the M¢TPP ligands contained two distinct pyrrole protons (4 each)—those located inside the triangles were shielded by and coupled to adjacent XDC linkers, whereas the exposed ones were not—an unmistakable sign of their bow tie structures. Thus, this work not only unveiled novel bow tie-shaped coordination complexes, but also accurately defined the actual structures and compositions of M¢TPP-based tricomponent SCCs.


Molecules ◽  
2021 ◽  
Vol 26 (11) ◽  
pp. 3083
Author(s):  
Wisam A. Al Isawi ◽  
Gellert Mezei

Anion binding and extraction from solutions is currently a dynamic research topic in the field of supramolecular chemistry. A particularly challenging task is the extraction of anions with large hydration energies, such as the carbonate ion. Carbonate-binding complexes are also receiving increased interest due to their relevance to atmospheric CO2 fixation. Nanojars are a class of self-assembled, supramolecular coordination complexes that have been shown to bind highly hydrophilic anions and to extract even the most hydrophilic ones, including carbonate, from water into aliphatic solvents. Here we present an expanded nanojar that is able to bind two carbonate ions, thus doubling the previously reported carbonate-binding capacity of nanojars. The new nanojar is characterized by detailed single-crystal X-ray crystallographic studies in the solid state and electrospray ionization mass spectrometric (including tandem MS/MS) studies in solution.


Marine Drugs ◽  
2020 ◽  
Vol 19 (1) ◽  
pp. 9
Author(s):  
Ya-Ping Liu ◽  
Sheng-Tao Fang ◽  
Zhen-Zhen Shi ◽  
Bin-Gui Wang ◽  
Xiao-Nian Li ◽  
...  

Three new phenylhydrazones, penoxahydrazones A–C (compounds 1–3), and two new quinazolines, penoxazolones A (compound 4) and B (compound 5), with unique linkages were isolated from the fungus Penicillium oxalicum obtained from the deep sea cold seep. Their structures and relative configurations were assigned by analysis of 1D/2D NMR and mass spectroscopic data, and the absolute configurations of 1, 4, and 5 were established on the basis of X-ray crystallography or ECD calculations. Compound 1 represents the first natural phenylhydrazone-bearing steroid, while compounds 2 and 3 are rarely occurring phenylhydrazone tautomers. Compounds 4 and 5 are enantiomers that feature quinazoline and cinnamic acid units. Some isolates exhibited inhibition of several marine phytoplankton species and marine-derived bacteria.


Marine Drugs ◽  
2021 ◽  
Vol 19 (6) ◽  
pp. 305
Author(s):  
Guangyuan Luo ◽  
Li Zheng ◽  
Qilin Wu ◽  
Senhua Chen ◽  
Jing Li ◽  
...  

Six new fusarin derivatives, fusarins G–L (1–6), together with five known compounds (5–11) were isolated from the marine-derived fungus Fusarium solani 7227. The structures of the new compounds were elucidated by means of comprehensive spectroscopic methods (1D and 2D NMR, HRESIMS, ECD, and ORC) and X-ray crystallography. Compounds 5–11 exhibited potent anti-inflammatory activity by inhibiting the production of NO in RAW264.7 cells activated by lipopolysaccharide, with IC50 values ranging from 3.6 to 32.2 μM. The structure–activity relationships of the fusarins are discussed herein.


Marine Drugs ◽  
2020 ◽  
Vol 18 (8) ◽  
pp. 426 ◽  
Author(s):  
Senhua Chen ◽  
Yanlian Deng ◽  
Chong Yan ◽  
Zhenger Wu ◽  
Heng Guo ◽  
...  

Two new benzofurans, alternabenzofurans A and B (1 and 2) and two new sesquiterpenoids, alternaterpenoids A and B (3 and 4), along with 18 known polyketides (5−22), were isolated from the marine-derived fungus Alternaria sp. 5102. Their structures were elucidated on the basis of extensive spectroscopic analyses (1D and 2D NMR, HR-ESIMS, and ECD) and X-ray crystallography, as well as the modified Mosher’s method. Compounds 2, 3, 5, 7, 9–18, and 20–22 exhibited potent anti-inflammatory activity by inhibiting the production of NO in RAW264.7 cells activated by lipopolysaccharide with IC50 values in the range from 1.3 to 41.1 μM. Structure-activity relationships of the secondary metabolites were discussed.


2000 ◽  
Vol 33 (2) ◽  
pp. 243-251 ◽  
Author(s):  
Walter C. Phillips ◽  
Martin Stanton ◽  
Alexander Stewart ◽  
Hua Qian ◽  
Charles Ingersoll ◽  
...  

A charge-coupled device (CCD)-based detector designed for macromolecular crystallography is described. The detector has an area of 200 × 200 mm, a readout time of 1.6 s, and total noise equivalent to approximately three 12 keV X-ray photons per pixel. The detector is constructed from a 2 × 2 array of four identical units, each unit consisting of a 4.1:1 demagnifying fiber-optic taper bonded to a 1 k × 1 k, 24 µm pixel, CCD sensor. Each CCD is read out in parallel though four channels and digitized to 16 bits. A Gd2O2S phosphor X-ray-to-light converter bonded to an aluminized-plastic film is held in contact with the input surfaces of the fiber-optic tapers with an air pillow. The full width at half-maximum (FWHM) of the point response function is 120 µm, the response is linear to better than 1% over the entire range of intensity from background to nearly full well, the gain is 3.4 e per 8 keV incident X-ray photon, the noise is 12.6 e per pixel for a 10 s integration time, the modulation transfer function (MTF) is 0.35 at 5 line pairs (lp) mm−1(the Nyquest frequency), and the measured detective quantum efficiency (DQE) is 0.74 for relatively strong Bragg peaks. Data collected from crystallographic studies with synchrotron radiation are presented. In an anomalous difference Patterson map for a data set collected in 40 min on a monoclinic myoglobin crystal, the magnitude of the Fe–Fe peaks is 18 times the standard uncertainty of the map.


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