scholarly journals In-situ ambient quantification of monoterpenes, sesquiterpenes, and related oxygenated compounds during BEARPEX 2007: implications for gas- and particle-phase chemistry

2009 ◽  
Vol 9 (15) ◽  
pp. 5505-5518 ◽  
Author(s):  
N. C. Bouvier-Brown ◽  
A. H. Goldstein ◽  
J. B. Gilman ◽  
W. C. Kuster ◽  
J. A. de Gouw
Keyword(s):  
Sierra Nevada ◽  
Atmospheric Chemistry ◽  
Ponderosa Pine ◽  
Forest Canopy ◽  
Loss Rate ◽  
Weather Conditions ◽  
Particle Phase ◽  
Aerosol Mass ◽  
Phase Chemistry

Abstract. We quantified ambient mixing ratios of 9 monoterpenes, 6 sesquiterpenes, methyl chavicol, the oxygenated terpene linalool, and nopinone using an in-situ gas chromatograph with a quadrupole mass spectrometer (GC-MS). These measurements were a part of the 2007 Biosphere Effects on AeRosols and Photochemistry EXperiment (BEARPEX) at Blodgett Forest, a ponderosa pine forest in the Sierra Nevada Mountains of California. To our knowledge, these observations represent the first direct in-situ ambient quantification of the sesquiterpenes α-bergamotene, longifolene, α-farnesene, and β-farnesene. From average diurnal mixing ratio profiles, we show that α-farnesene emissions are dependent mainly on temperature whereas α-bergamotene and β-farnesene emissions are temperature- and light-dependent. The amount of sesquiterpene mass quantified above the canopy was small (averaging a total of 3.3 ppt during the day), but nevertheless these compounds contributed 7.6% to the overall ozone-olefin loss rate above the canopy. Assuming that the monoterpene-to-sesquiterpene emission rate in the canopy is similar to that observed in branch enclosure studies at the site during comparable weather conditions, and the average yield of aerosol mass from these sesquiterpenes is 10–50%, the amount of sesquiterpene mass reacted within the Blodgett Forest canopy alone accounts for 6–32% of the total organic aerosol mass measured during BEARPEX. The oxygenated monoterpene linalool was also quantified for the first time at Blodgett Forest. The linalool mass contribution was small (9.9 ppt and 0.74 ppt within and above the canopy, respectively), but it contributed 1.1% to the total ozone-olefin loss rate above the canopy. Reactive and semi-volatile compounds, especially sesquiterpenes, significantly impact the gas- and particle-phase chemistry of the atmosphere at Blodgett Forest and should be included in both biogenic volatile organic carbon emission and atmospheric chemistry models.

scholarly journals In-situ ambient quantification of monoterpenes, sesquiterpenes, and related oxygenated compounds during BEARPEX 2007 – implications for gas- and particle-phase chemistry

2009 ◽  
Vol 9 (2) ◽  
pp. 10235-10269 ◽  
Author(s):  
N. C. Bouvier-Brown ◽  
A. H. Goldstein ◽  
J. B. Gilman ◽  
W. C. Kuster ◽  
J. A. de Gouw
Keyword(s):  
Sierra Nevada ◽  
Atmospheric Chemistry ◽  
Ponderosa Pine ◽  
Forest Canopy ◽  
Weather Conditions ◽  
Particle Phase ◽  
Aerosol Mass ◽  
Phase Chemistry ◽  
Ozone Reactivity

Abstract. We quantified ambient mixing ratios of 9 monoterpenes, 6 sesquiterpenes, methyl chavicol, the oxygenated terpene linalool, and nopinone using an in-situ gas chromatograph with a quadrupole mass spectrometer (GC-MS). These measurements were a part of the 2007 Biosphere Effects on AeRosols and Photochemistry EXperiment (BEARPEX) at Blodgett Forest, a ponderosa pine forest in the Sierra Nevada Mountains of California. To our knowledge, these observations represent the first direct in-situ ambient quantification of the sesquiterpenes α-bergamotene, longifolene, α-farnesene, and β-farnesene. From average diurnal mixing ratio profiles, we show that α-farnesene emissions are dependent mainly on temperature whereas α-bergamotene and β-farnesene emissions are temperature- and light-dependent. The amount of sesquiterpene mass quantified above the canopy was small (averaging a total of 3.3 ppt during the day), but nevertheless these compounds contributed 8.5% to the overall ozone reactivity above the canopy. Assuming that the monoterpene-to-sesquiterpene emission rate in the canopy is similar to that observed in branch enclosure studies at the site during comparable weather conditions, and the average yield of aerosol mass from these sesquiterpenes is 10–50%, the amount of sesquiterpene mass reacted within the Blodgett Forest canopy alone accounts for 8–38% of the total organic aerosol mass measured during BEARPEX. The oxygenated monoterpene linalool was also quantified for the first time at Blodgett Forest. The linalool mass contribution was small (9.9 ppt and 0.74 ppt within and above the canopy, respectively), but it contributed 1.2% to the total ozone reactivity above the canopy. Reactive and semi-volatile compounds, especially sesquiterpenes, significantly impact the gas- and particle-phase chemistry of the atmosphere at Blodgett Forest and should be included in both biogenic volatile organic carbon emission and atmospheric chemistry models.

scholarly journals Chlorine nitrate in the atmosphere

2018 ◽  
Vol 18 (20) ◽  
pp. 15363-15386 ◽  
Author(s):  
Thomas von Clarmann ◽  
Sören Johansson
Keyword(s):  
Atmospheric Chemistry ◽  
Infrared Emission ◽  
Chlorine Nitrate ◽  
Rotational Bands ◽  
In Situ Techniques ◽  
Mixing Ratios ◽  
Gas Phase Chemistry ◽  
Polar Stratosphere ◽  
Phase Chemistry

Abstract. This review article compiles the characteristics of the gas chlorine nitrate and discusses its role in atmospheric chemistry. Chlorine nitrate is a reservoir of both stratospheric chlorine and nitrogen. It is formed by a termolecular reaction of ClO and NO2. Sink processes include gas-phase chemistry, photo-dissociation, and heterogeneous chemistry on aerosols. The latter sink is particularly important in the context of polar spring stratospheric chlorine activation. ClONO2 has vibrational–rotational bands in the infrared, notably at 779, 809, 1293, and 1735 cm−1, which are used for remote sensing of ClONO2 in the atmosphere. Mid-infrared emission and absorption spectroscopy have long been the only concepts for atmospheric ClONO2 measurements. More recently, fluorescence and mass spectroscopic in situ techniques have been developed. Global ClONO2 distributions have a maximum at polar winter latitudes at about 20–30 km altitude, where mixing ratios can exceed 2 ppbv. The annual cycle is most pronounced in the polar stratosphere, where ClONO2 concentrations are an indicator of chlorine activation and de-activation.

scholarly journals Origins and composition of fine atmospheric carbonaceous aerosol in the Sierra Nevada Mountains, California

2011 ◽  
Vol 11 (19) ◽  
pp. 10219-10241 ◽  
Author(s):  
D. R. Worton ◽  
A. H. Goldstein ◽  
D. K. Farmer ◽  
K. S. Docherty ◽  
J. L. Jimenez ◽  
...  
Keyword(s):  
Sierra Nevada ◽  
Ponderosa Pine ◽  
Organic Aerosol ◽  
Oxidation Products ◽  
Carbonaceous Aerosol ◽  
Research Station ◽  
Particle Phase ◽  
Methyl Chavicol ◽  
Biogenic Components ◽  
Urban Emissions

Abstract. In this paper we report chemically resolved measurements of organic aerosol (OA) and related tracers during the Biosphere Effects on Aerosols and Photochemistry Experiment (BEARPEX) at the Blodgett Forest Research Station, California from 15 August–10 October 2007. OA contributed the majority of the mass to the fine atmospheric particles and was predominately oxygenated (OOA). The highest concentrations of OA were during sporadic wildfire influence when aged plumes were impacting the site. In situ measurements of particle phase molecular markers were dominated by secondary compounds and along with gas phase compounds could be categorized into six factors or sources: (1) aged biomass burning emissions and oxidized urban emissions, (2) oxidized urban emissions (3) oxidation products of monoterpene emissions, (4) monoterpene emissions, (5) anthropogenic emissions and (6) local methyl chavicol emissions and oxidation products. There were multiple biogenic components that contributed to OA at this site whose contributions varied diurnally, seasonally and in response to changing meteorological conditions, e.g. temperature and precipitation events. Concentrations of isoprene oxidation products were larger when temperatures were higher during the first half of the campaign (15 August–12 September) due to more substantial emissions of isoprene and enhanced photochemistry. The oxidation of methyl chavicol, an oxygenated terpene emitted by ponderosa pine trees, contributed similarly to OA throughout the campaign. In contrast, the abundances of monoterpene oxidation products in the particle phase were greater during the cooler conditions in the latter half of the campaign (13 September–10 October), even though emissions of the precursors were lower, although the mechanism is not known. OA was correlated with the anthropogenic tracers 2-propyl nitrate and carbon monoxide (CO), consistent with previous observations, while being comprised of mostly non-fossil carbon (>75%). The correlation between OA and an anthropogenic tracer does not necessarily identify the source of the carbon as being anthropogenic but instead suggests a coupling between the anthropogenic and biogenic components in the air mass that might be related to the source of the oxidant and/or the aerosol sulfate. Observations of organosulfates of isoprene and α-pinene provided evidence for the likely importance of aerosol sulfate in spite of neutralized aerosol although acidic plumes might have played a role upwind of the site. This is in contrast to laboratory studies where strongly acidic seed aerosols were needed in order to form these compounds. These compounds together represented only a minor fraction (<1%) of the total OA mass, which may be the result of the neutralized aerosol at the site or because only a small number of organosulfates were quantified. The low contribution of organosulfates to total OA suggests that other mechanisms, e.g. NOx enhancement of oxidant levels, are likely responsible for the majority of the anthropogenic enhancement of biogenic secondary organic aerosol observed at this site.

scholarly journals Observations of HNO<sub>3</sub>, ΣAN, ΣPN and NO<sub>2</sub> fluxes: evidence for rapid HO<sub>x</sub> chemistry within a pine forest canopy

2007 ◽  
Vol 7 (3) ◽  
pp. 7087-7136 ◽  
Author(s):  
D. K. Farmer ◽  
R. C. Cohen
Keyword(s):  
Nitrogen Oxides ◽  
Sierra Nevada ◽  
Residence Time ◽  
Ponderosa Pine ◽  
Forest Canopy ◽  
Similarity Theory ◽  
Peroxy Radical ◽  
Pine Forest ◽  
Alkyl Nitrates ◽  
Emission Fluxes

Abstract. Measurements of exchange of reactive nitrogen oxides between the atmosphere and a ponderosa pine forest in the Sierra Nevada Mountains are reported. During winter, we observe upward fluxes of NO2, and downward fluxes of total peroxy and peroxy acyl nitrates (ΣPNs), total gas and particle phase alkyl and multifunctional alkyl nitrates (ΣANs(g+p), and the sum of gaseous HNO3 and semi-volatile NO3− particles (HNO3(g+p). We use calculations of the vertical profile and flux of NO, partially constrained by observations, to show that net midday ΣNOyi fluxes in winter are –4.9 ppt m s−1. The signs and magnitudes of these wintertime individual and ΣNOyi fluxes are in the range of prior measurements. In contrast, during summer, we observe downward fluxes only of ΣANs(g+p), and upward fluxes of HNO3(g+p), ΣPNs and NO2 with signs and magnitudes that are unlike most, if not all, previous observations and analyses of fluxes of individual nitrogen oxides. The results imply that the mechanisms contributing to NOy fluxes, at least at this site, are much more complex than previously recognized. We show that the observations of upward fluxes of HNO3(g+p) and ΣPNs during summer are consistent with oxidation of NO2 and acetaldehyde by OH with the product of concentration and residence time equal to 1.1×1010 molec OH cm−3 s, e.g. 3×107 molecules cm−3 OH for a 400 s canopy residence time. We show that ΣAN(g+p) fluxes are consistent with this same OH if the reaction of OH with ΣANs produces either HNO3 or NO2 in 6–30% yield. Calculations of NO fluxes constrained by the NO2 observations and the inferred OH indicate that NOx fluxes are downward into the canopy because of the substantial conversion of NOx to HNO3 and ΣPNs in the canopy. Even so, we derive that NOx emission fluxes of ~15 ng(N) m−2 s−1 at midday during summer are required to balance the NOx and NOy flux budgets. These fluxes are partly explained by estimates of soil emissions (estimated to be between 3 and 6 ng(N) m−2 s−1). One possibility for the remainder of the NOx source is large HONO emissions. Alternatively, the 15 ng(N) m−2 s−1 emission estimate may be too large, and the budget balanced if the deposition of HNO3 and ΣPNs is slower than we estimate, if there are large errors in either our understanding of peroxy radical chemistry, or our assumptions that the budget is required to balance because the fluxes do not obey similarity theory.

scholarly journals Secondary aerosol formation from dimethyl sulfide – improved mechanistic understanding based on smog chamber experiments and modelling

2021 ◽  
Vol 21 (13) ◽  
pp. 9955-9976
Author(s):  
Robin Wollesen de Jonge ◽  
Jonas Elm ◽  
Bernadette Rosati ◽  
Sigurd Christiansen ◽  
Noora Hyttinen ◽  
...  
Keyword(s):  
Dimethyl Sulfide ◽  
Sea Spray ◽  
Smog Chamber ◽  
Marine Atmosphere ◽  
Mass Yield ◽  
Particle Phase ◽  
Secondary Aerosol ◽  
Dms Oxidation ◽  
Aerosol Mass ◽  
Phase Chemistry

Abstract. Dimethyl sulfide (DMS) is the dominant biogenic sulfur compound in the ambient marine atmosphere. Low-volatility acids from DMS oxidation promote the formation and growth of sulfur aerosols and ultimately alter cloud properties and Earth's climate. We studied the OH-initiated oxidation of DMS in the Aarhus University Research on Aerosol (AURA) smog chamber and the marine boundary layer (MBL) with the aerosol dynamics and gas- and particle-phase chemistry kinetic multilayer model ADCHAM. Our work involved the development of a revised and comprehensive multiphase DMS oxidation mechanism, capable of both reproducing smog chamber and atmospheric relevant conditions. The secondary aerosol mass yield in the AURA chamber was found to have a strong dependence on the reaction of methyl sulfinic acid (MSIA) and OH, causing a 82.8 % increase in the total PM at low relative humidity (RH), while the autoxidation of the intermediate radical CH3SCH2OO forming hydroperoxymethyl thioformate (HPMTF) proved important at high temperature and RH, decreasing the total PM by 55.8 %. The observations and modelling strongly support the finding that a liquid water film existed on the Teflon surface of the chamber bag, which enhanced the wall loss of water-soluble intermediates and oxidants dimethyl sulfoxide (DMSO), MSIA, HPMTF, SO2, methanesulfonic acid (MSA), sulfuric acid (SA) and H2O2. The effect caused a 64.8 % and 91.7 % decrease in the secondary aerosol mass yield obtained at both dry (0 % RH–12 % RH) and humid (50 % RH–80 % RH) conditions, respectively. Model runs reproducing the ambient marine atmosphere indicate that OH comprises a strong sink of DMS in the MBL (accounting for 31.1 % of the total sink flux of DMS) although less important than the combined effect of halogen species Cl and BrO (accounting for 24.3 % and 38.7 %, respectively). Cloudy conditions promote the production of SO42- particular mass (PM) from SO2 accumulated in the gas phase, while cloud-free periods facilitate MSA formation in the deliquesced particles. The exclusion of aqueous-phase chemistry lowers the DMS sink as no halogens are activated in the sea spray particles and underestimates the secondary aerosol mass yield by neglecting SO42- and MSA PM production in the particle phase. Overall, this study demonstrated that the current DMS oxidation mechanisms reported in literature are inadequate in reproducing the results obtained in the AURA chamber, whereas the revised chemistry captured the formation, growth and chemical composition of the formed aerosol particles well. Furthermore, we emphasize the importance of OH-initiated oxidation of DMS in the ambient marine atmosphere during conditions with low sea spray emissions.

scholarly journals In-canopy gas-phase chemistry during CABINEX 2009: sensitivity of a 1-D canopy model to vertical mixing and isoprene chemistry

2012 ◽  
Vol 12 (18) ◽  
pp. 8829-8849 ◽  
Author(s):  
A. M. Bryan ◽  
S. B. Bertman ◽  
M. A. Carroll ◽  
S. Dusanter ◽  
G. D. Edwards ◽  
...  
Keyword(s):  
Atmospheric Chemistry ◽  
Forest Canopy ◽  
Deciduous Forest ◽  
Vertical Mixing ◽  
Field Studies ◽  
Oxidation Products ◽  
Base Case ◽  
Emission Model ◽  
Order Of Magnitude ◽  
Phase Chemistry

Abstract. Vegetation emits large quantities of biogenic volatile organic compounds (BVOC). At remote sites, these compounds are the dominant precursors to ozone and secondary organic aerosol (SOA) production, yet current field studies show that atmospheric models have difficulty in capturing the observed HOx cycle and concentrations of BVOC oxidation products. In this manuscript, we simulate BVOC chemistry within a forest canopy using a one-dimensional canopy-chemistry model (Canopy Atmospheric CHemistry Emission model; CACHE) for a mixed deciduous forest in northern Michigan during the CABINEX 2009 campaign. We find that the base-case model, using fully-parameterized mixing and the simplified biogenic chemistry of the Regional Atmospheric Chemistry Model (RACM), underestimates daytime in-canopy vertical mixing by 50–70% and by an order of magnitude at night, leading to discrepancies in the diurnal evolution of HOx, BVOC, and BVOC oxidation products. Implementing observed micrometeorological data from above and within the canopy substantially improves the diurnal cycle of modeled BVOC, particularly at the end of the day, and also improves the observation-model agreement for some BVOC oxidation products and OH reactivity. We compare the RACM mechanism to a version that includes the Mainz isoprene mechanism (RACM-MIM) to test the model sensitivity to enhanced isoprene degradation. RACM-MIM simulates higher concentrations of both primary BVOC (isoprene and monoterpenes) and oxidation products (HCHO, MACR+MVK) compared with RACM simulations. Additionally, the revised mechanism alters the OH concentrations and increases HO2. These changes generally improve agreement with HOx observations yet overestimate BVOC oxidation products, indicating that this isoprene mechanism does not improve the representation of local chemistry at the site. Overall, the revised mechanism yields smaller changes in BVOC and BVOC oxidation product concentrations and gradients than improving the parameterization of vertical mixing with observations, suggesting that uncertainties in vertical mixing parameterizations are an important component in understanding observed BVOC chemistry.

scholarly journals The Chemistry of Atmosphere-Forest Exchange (CAFE) Model – Part 1: Model description and characterization

2010 ◽  
Vol 10 (9) ◽  
pp. 21721-21790
Author(s):  
G. M. Wolfe ◽  
J. A. Thornton
Keyword(s):  
Sierra Nevada ◽  
Ponderosa Pine ◽  
Forest Canopy ◽  
Transport Model ◽  
Chemical Mechanism ◽  
Model Description ◽  
Chemical Transport Model ◽  
Near Surface ◽  
General Chemical ◽  
Radiation Extinction

Abstract. We present the Chemistry of Atmosphere-Forest Exchange (CAFE) model, a vertically-resolved 1-D chemical transport model designed to probe the details of near-surface reactive gas exchange. CAFE integrates all key processes, including turbulent diffusion, emission, deposition and chemistry, throughout the forest canopy and mixed layer. It is the first model of its kind to incorporate the Master Chemical Mechanism (MCM) and a suite of reactions for the oxidation of monoterpenes and sesquiterpenes, providing a more comprehensive description of the oxidative chemistry occurring within and above the forest. We use CAFE to simulate a young Ponderosa pine forest in the Sierra Nevada, CA. Utilizing meteorological constraints from the BEARPEX-2007 field campaign, we assess the sensitivity of modeled fluxes to parameterizations of diffusion, laminar sublayer resistance and radiation extinction. To characterize the general chemical environment of this forest, we also present modeled mixing ratio profiles of biogenic hydrocarbons, hydrogen oxides and reactive nitrogen. The vertical profiles of these species demonstrate a range of structures and gradients that reflect the interplay of physical and chemical processes within the forest canopy, which can influence net exchange.

scholarly journals Methyl chavicol: characterization of its biogenic emission rate, abundance, and oxidation products in the atmosphere

2008 ◽  
Vol 8 (6) ◽  
pp. 19707-19741 ◽  
Author(s):  
N. C. Bouvier-Brown ◽  
A. H. Goldstein ◽  
D. R. Worton ◽  
D. M. Matross ◽  
J. B. Gilman ◽  
...  
Keyword(s):  
Sierra Nevada ◽  
Atmospheric Chemistry ◽  
Ponderosa Pine ◽  
Emission Rate ◽  
Oxidation Products ◽  
Biogenic Emission ◽  
Methyl Chavicol ◽  
Mixing Ratios ◽  
Sierra Nevada Mountains ◽  
Ponderosa Pine Forest

Abstract. We report measurements of ambient atmospheric mixing ratios for methyl chavicol and determine its biogenic emission rate. Methyl chavicol, a biogenic oxygenated aromatic compound, is abundant within and above Blodgett Forest, a ponderosa pine forest in the Sierra Nevada Mountains of California. Methyl chavicol was detected simultaneously by three in-situ instruments – a gas chromatograph with mass spectrometer detector (GC-MS), a proton transfer reaction mass spectrometer (PTR-MS), and a thermal desorption aerosol GC-MS (TAG) – and found to be abundant within and above Blodgett Forest, a ponderosa pine forest in the Sierra Nevada Mountains of California. Methyl chavicol atmospheric mixing ratios are strongly correlated with 2-methyl-3-buten-2-ol (MBO), a light- and temperature-dependent biogenic emission from the ponderosa pine trees at Blodgett Forest. Scaling from this correlation, methyl chavicol emissions account for 4–68% of the carbon mass emitted as MBO in the daytime, depending on the season. From this relationship, we estimate a daytime basal emission rate of 0.72–10.2 μgCg−1h−1, depending on needle age and seasonality. We also present the first observations of its oxidation products (4-methoxybenzaldehyde and 4-methyoxy benzene acetaldehyde) in the ambient atmosphere. Methyl chavicol is a major essential oil component of many plant species. This work suggests that methyl chavicol plays a significant role in the atmospheric chemistry of Blodgett Forest, and potentially other sites, and should be included explicitly in both biogenic volatile organic carbon emission and atmospheric chemistry models.

scholarly journals Observations of HNO<sub>3</sub>, ΣAN, ΣPN and NO<sub>2</sub> fluxes: evidence for rapid HO<sub>x</sub> chemistry within a pine forest canopy

2008 ◽  
Vol 8 (14) ◽  
pp. 3899-3917 ◽  
Author(s):  
D. K. Farmer ◽  
R. C. Cohen
Keyword(s):  
Nitrogen Oxides ◽  
Sierra Nevada ◽  
Residence Time ◽  
Ponderosa Pine ◽  
Forest Canopy ◽  
Similarity Theory ◽  
Peroxy Radical ◽  
Pine Forest ◽  
Alkyl Nitrates ◽  
Emission Fluxes

Abstract. Measurements of exchange of reactive nitrogen oxides between the atmosphere and a ponderosa pine forest in the Sierra Nevada Mountains are reported. During winter, we observe upward fluxes of NO2, and downward fluxes of total peroxy and peroxy acyl nitrates (ΣPNs), total gas and particle phase alkyl and multifunctional alkyl nitrates (ΣANs(g+p)), and the sum of gaseous HNO3 and semi-volatile NO3− particles (HNO3(g+p)). We use calculations of the vertical profile and flux of NO, partially constrained by observations, to show that net midday ΣNOyi fluxes in winter are –4.9 ppt m s−1. The signs and magnitudes of these wintertime individual and ΣNOyi fluxes are in the range of prior measurements. In contrast, during summer, we observe downward fluxes only of ΣANs(g+p), and upward fluxes of HNO3(g+p), ΣPNs and NO2 with signs and magnitudes that are unlike most, if not all, previous observations and analyses of fluxes of individual nitrogen oxides. The results imply that the mechanisms contributing to NOy fluxes, at least at this site, are much more complex than previously recognized. We show that the observations of upward fluxes of HNO3(g+p) and σPNs during summer are consistent with oxidation of NO2 and acetaldehyde by an OH x residence time of 1.1×1010 molec OH cm−3 s, corresponding to 3 to 16×107 molecules cm−3 OH within the forest canopy for a 420 to 70 s canopy residence time. We show that ΣAN(g+p) fluxes are consistent with this range in OH if the reaction of OH with ΣANs produces either HNO3 or NO2 with a 6–30% yield. Calculations of NO fluxes constrained by the NO2 observations and the inferred OH indicate that NOx fluxes are downward into the canopy because of the substantial conversion of NOx to HNO3 and σPNs in the canopy. Even so, we derive that NOx emission fluxes of ~15 ng(N) m−2 s−1 at midday during summer are required to balance the NOx and NOy flux budgets. These fluxes are partly explained by estimates of soil emissions (estimated to be between 3 and 6 ng(N) m−2 s-1). One possibility for the remainder of the NOx source is large HONO emissions. Alternatively, the 15 ng(N) m−2 s−1 emission estimate may be too large, and the budget balanced if the deposition of HNO3 and σPNs is slower than we estimate, if there are large errors in either our understanding of peroxy radical chemistry, or our assumptions that the budget is required to balance because the fluxes do not obey similarity theory.

scholarly journals The 1-way on-line coupled model system MECO(n) – Part 4: Chemical evaluation (based on MESSy v2.52)

2016 ◽  
Vol 9 (10) ◽  
pp. 3545-3567 ◽  
Author(s):  
Mariano Mertens ◽  
Astrid Kerkweg ◽  
Patrick Jöckel ◽  
Holger Tost ◽  
Christiane Hofmann
Keyword(s):  
Atmospheric Chemistry ◽  
Coupled Model ◽  
Ground Level ◽  
Global Scale ◽  
Model System ◽  
Scale Down ◽  
On Line ◽  
In Situ Observations ◽  
Phase Chemistry

Abstract. For the first time, a simulation incorporating tropospheric and stratospheric chemistry using the newly developed MECO(n) model system is performed. MECO(n) is short for MESSy-fied ECHAM and COSMO models nested n times. It features an online coupling of the COSMO-CLM model, equipped with the Modular Earth Submodel System (MESSy) interface (called COSMO/MESSy), with the global atmospheric chemistry model ECHAM5/MESSy for Atmospheric Chemistry (EMAC). This online coupling allows a consistent model chain with respect to chemical and meteorological boundary conditions from the global scale down to the regional kilometre scale. A MECO(2) simulation incorporating one regional instance over Europe with 50 km resolution and one instance over Germany with 12 km resolution is conducted for the evaluation of MECO(n) with respect to tropospheric gas-phase chemistry. The main goal of this evaluation is to ensure that the chemistry-related MESSy submodels and the online coupling with respect to the chemistry are correctly implemented. This evaluation is a prerequisite for the further usage of MECO(n) in atmospheric chemistry-related studies. Results of EMAC and the two COSMO/MESSy instances are compared with satellite, ground-based and aircraft in situ observations, focusing on ozone, carbon monoxide and nitrogen dioxide. Further, the methane lifetimes in EMAC and the two COSMO/MESSy instances are analysed in view of the tropospheric oxidation capacity. From this evaluation, we conclude that the chemistry-related submodels and the online coupling with respect to the chemistry are correctly implemented. In comparison with observations, both EMAC and COSMO/MESSy show strengths and weaknesses. Especially in comparison to aircraft in situ observations, COSMO/MESSy shows very promising results. However, the amplitude of the diurnal cycle of ground-level ozone measurements is underestimated. Most of the differences between COSMO/MESSy and EMAC can be attributed to differences in the dynamics of both models, which are subject to further model developments.

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