scholarly journals ELECTRON PARAMETERS OF 1,1,1 – TRILUOROALKANES

Author(s):  
Alexey V. Kotomkin ◽  
Natalia P. Rusakova ◽  
Vladimir V. Turovtsev ◽  
Yuriy D. Orlov

On the basis of quantum-chemical calculations the properties of trifluoro-substituted hydrocarbon molecules CnH2n+1-CF3 (n ≤ 9) received from their electron density distribution were considered. The geometry optimization of ten structures was carried out. The surfaces of zero flow electron charge density gradient were specified, and the basins of atomic groups and fluorine atoms were found. The electron integral parameters (charges q(R), energies E(R) and volumes V(R)) of atomic groups in trifluoroalkane molecules were calculated and analyzed. The relationship between the length of the hydrocarbon chains and the transferability of the properties of the selected groups (CF3, CH3, CH2) was revealed, that is reflected in their transferable parameters. For the studied homologous series the qualitative group electronegativity scale was made up and inductive effect (I - effect) of fluorine containing group was considered. The attenuation of I – effect in CnH2n+1-CF3 (n ≥ 6) within molecular fragments CF3-(CH2)4 and CH3-CH2 was identified. In this regard, the appearance of the «unperturbed» CH2 group was registered at n > 6. The «standard» (or «transferable») value of the total group energy E(R) was introduced and computing of the relative group energy ΔE(R) was described. It was shown, that the reduction of the volumes of the nearest СН2 to the СF3 was caused by the electron density redistribution. The comparative analysis of the group charges q(R) in CnH2n+1-CF3 (n ≤ 9) with corresponding q(R) in monofluorine alkanes, monofluorine alkane radicals, difluorine alkanes and difluorine alkane radicals was performed. The comparison of the charges of relevant groups and fluorine-containing fragments of the fluoro-substituted nonane and their radicals was presented as graphic dependence, which provides an understanding of the attenuation of I – effect from СF3.

1991 ◽  
Vol 251 ◽  
pp. 11-27 ◽  
Author(s):  
G.N. Dolenko ◽  
A.L. Litvin ◽  
V.P. Elin ◽  
O.Kh. Poleshchuk

2020 ◽  
Author(s):  
Sopanant Datta ◽  
Taweetham Limpanuparb

<p>This article presents theoretical data on geometric and energetic features of halobenzenes and xylenes. Data were obtained from <i>ab initio</i> geometry optimization and frequency calculations at HF, B3LYP, MP2 and CCSD levels of theory on 6-311++G(d,p) basis set. In total, 1504 structures of halobenzenes, three structures of xylenes and one structure of benzene were generated and processed by custom-made codes in Mathematica. The quantum chemical calculation was completed in Q-Chem software package. Geometric and energetic data of the compounds are presented in this paper as supplementary tables. Raw output files as well as codes and scripts associated with production and extraction of data are also provided.</p>


2020 ◽  
Author(s):  
. Srinidhi

In recent years, the significance of oxidative stress in the pathophysiology of Neurodegenerative/developmental disorders like Attention Deficit Hyperactivity Disorder, Parkinson's and Alzheimer's is being studied at an accelerating pace. Nrf2 activation via Keap1 inhibition is an established strategy for improving the activity of the cellular antioxidant mechanism. In this study, pharmacophore modeling was employed to design efficient Keap1 inhibitors from well-known polypharmacological phytochemicals after extensive structural modifications to improve their pharmacodynamic, pharmacokinetic and drug-likeness qualities (BBB > 0.9, HIA > 0.85). Density functional theory-based quantum chemical calculations at the B3LYP/6-31G (d, p) level of theory were performed for the geometry optimization of the novel ligands and for computing their electronic properties. Resveratrol-4 was found to be the most desirable candidate with an ΔE = 4.24497 eV. HOMO and LUMO distribution of the Resveratrol-4 was found to be very favourable for keap1 binding. Molecular docking studies and comparative interaction analysis also ranked the Resveratrol-4 derivative as the best multi-domain antagonist of the Keap1 protein with a binding affinity of -8 kcal/mole. The following study presents the application of Resveratrol-4 a novel, modified, phytochemical derivative, as an efficient antagonist of the Keap1 protein for enhancing nrf2 mediated neuroprotection from redox insults.


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