scholarly journals Early warning signals from the periphery

2021 ◽  
Author(s):  
Manfred Füllsack ◽  
Daniel Reisinger ◽  
Marie Kapeller ◽  
Georg Jäger
Keyword(s):  
Time Series ◽  
Social Interactions ◽  
Early Warning ◽  
Focus Attention ◽  
Warning Signals ◽  
Feedback Effects ◽  
Early Warning Signals ◽  
Agent Based ◽  
Critical Transitions ◽  
Micro Level

AbstractStudies on the possibility of predicting critical transitions with statistical methods known as early warning signals (EWS) are often conducted on data generated with equation-based models (EBMs). These models base on difference or differential equations, which aggregate a system’s components in a mathematical term and therefore do not allow for a detailed analysis of interactions on micro-level. As an alternative, we suggest a simple, but highly flexible agent-based model (ABM), which, when applying EWS-analysis, gives reason to (a) consider social interaction, in particular negative feedback effects, as an essential trigger of critical transitions, and (b) to differentiate social interactions, for example in network representations, into a core and a periphery of agents and focus attention on the periphery. Results are tested against time series from a networked version of the Ising-model, which is often used as example for generating hysteretic critical transitions.

scholarly journals Detecting and distinguishing tipping points using spectral early warning signals

2020 ◽  
Vol 17 (170) ◽  
pp. 20200482
Author(s):  
T. M. Bury ◽  
C. T. Bauch ◽  
M. Anand
Keyword(s):  
Complex Systems ◽  
Early Warning ◽  
Dynamical Regime ◽  
Tipping Points ◽  
Warning Signals ◽  
Early Warning Signals ◽  
Density Dependent ◽  
Critical Transitions ◽  
Fold Bifurcation ◽  
Characteristic Signal

Theory and observation tell us that many complex systems exhibit tipping points—thresholds involving an abrupt and irreversible transition to a contrasting dynamical regime. Such events are commonly referred to as critical transitions. Current research seeks to develop early warning signals (EWS) of critical transitions that could help prevent undesirable events such as ecosystem collapse. However, conventional EWS do not indicate the type of transition, since they are based on the generic phenomena of critical slowing down. For instance, they may fail to distinguish the onset of oscillations (e.g. Hopf bifurcation) from a transition to a distant attractor (e.g. Fold bifurcation). Moreover, conventional EWS are less reliable in systems with density-dependent noise. Other EWS based on the power spectrum (spectral EWS) have been proposed, but they rely upon spectral reddening, which does not occur prior to critical transitions with an oscillatory component. Here, we use Ornstein–Uhlenbeck theory to derive analytic approximations for EWS prior to each type of local bifurcation, thereby creating new spectral EWS that provide greater sensitivity to transition proximity; higher robustness to density-dependent noise and bifurcation type; and clues to the type of approaching transition. We demonstrate the advantage of applying these spectral EWS in concert with conventional EWS using a population model, and show that they provide a characteristic signal prior to two different Hopf bifurcations in data from a predator–prey chemostat experiment. The ability to better infer and differentiate the nature of upcoming transitions in complex systems will help humanity manage critical transitions in the Anthropocene Era.

scholarly journals Change sign detection with differential MDL change statistics and its applications to COVID-19 pandemic analysis

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Kenji Yamanishi ◽  
Linchuan Xu ◽  
Ryo Yuki ◽  
Shintaro Fukushima ◽  
Chuan-hao Lin
Keyword(s):  
Time Series ◽  
Early Warning ◽  
Data Science ◽  
Minimum Description Length ◽  
Length Change ◽  
Warning Signals ◽  
Early Warning Signals ◽  
New Information ◽  
Long Time ◽  
Synthetic Datasets

AbstractWe are concerned with the issue of detecting changes and their signs from a data stream. For example, when given time series of COVID-19 cases in a region, we may raise early warning signals of an epidemic by detecting signs of changes in the data. We propose a novel methodology to address this issue. The key idea is to employ a new information-theoretic notion, which we call the differential minimum description length change statistics (D-MDL), for measuring the scores of change sign. We first give a fundamental theory for D-MDL. We then demonstrate its effectiveness using synthetic datasets. We apply it to detecting early warning signals of the COVID-19 epidemic using time series of the cases for individual countries. We empirically demonstrate that D-MDL is able to raise early warning signals of events such as significant increase/decrease of cases. Remarkably, for about $$64\%$$ 64 % of the events of significant increase of cases in studied countries, our method can detect warning signals as early as nearly six days on average before the events, buying considerably long time for making responses. We further relate the warning signals to the dynamics of the basic reproduction number R0 and the timing of social distancing. The results show that our method is a promising approach to the epidemic analysis from a data science viewpoint.

scholarly journals Performance of early warning signals for disease emergence: a case study on COVID-19 data

2021 ◽  
Author(s):  
Daniele Proverbio ◽  
Françoise Kemp ◽  
Stefano Magni ◽  
Jorge Gonçalves
Keyword(s):  
Early Warning ◽  
Disease Emergence ◽  
Warning Signals ◽  
Active Monitoring ◽  
Prevalence Data ◽  
Early Warning Signals ◽  
Epidemic Dynamics ◽  
Critical Transitions ◽  
Parameter Values

AbstractThe sudden emergence of infectious diseases pose threats to societies worldwide and it is notably difficult to detect. In the past few years, several early warning signals (EWS) were introduced, to alert to impending critical transitions and extend the set of indicators for risk assessment. While they were originally thought to be generic, recent works demonstrated their sensitivity to some dynamical characteristics such as system noise and rates of approach to critical parameter values. Moreover, testing on empirical data is so far limited. Hence, validating their performance remains a challenge. In this study, we analyse the performance of common EWS such as increasing variance and autocorrelation in detecting the emergence of COVID-19 outbreaks in various countries, based on prevalence data. We show that EWS are successful in detecting disease emergence provided that some basic assumptions are satisfied: a slow forcing through the transitions and not fat-tailed noise. We also show cases where EWS fail, thus providing a verification analysis of their potential and limitations. Overall, this suggests that EWS can be useful for active monitoring of epidemic dynamics, but that their performance is sensitive to surveillance procedures. Our results thus represent a further step towards the application of EWS indicators for informing public health policies.

scholarly journals Effect of time-series length and resolution on abundance- and trait-based early warning signals of population declines

2019 ◽  
Author(s):  
A.A. Arkilanian ◽  
C.F. Clements ◽  
A. Ozgul ◽  
G. Baruah
Keyword(s):  
Time Series ◽  
Early Warning ◽  
Generation Time ◽  
Time Series Data ◽  
Series Data ◽  
Series Length ◽  
Warning Signals ◽  
Relative Time ◽  
Early Warning Signals ◽  
Population Collapse

AbstractNatural populations are increasingly threatened with collapse at the hands of anthropogenic effects. Predicting population collapse with the help of generic early warning signals (EWS) may provide a prospective tool for identifying species or populations at highest risk. However, pattern-to-process methods such as EWS have a multitude of challenges to overcome to be useful, including the low signal to noise ratio of ecological systems and the need for high quality time-series data. The inclusion of trait dynamics with EWS has been proposed as a more robust tool to predict population collapse. However, the length and resolution of available time series are highly variable from one system to another, especially when generation time is considered. As yet it remains unknown how this variability with regards to generation time will alter the efficacy of EWS. Here we take both a simulation- and experimental-based approach to assess the impacts of relative time-series length and resolution on the forecasting ability of EWS. We show that EWS’ performance decreases with decreasing length and resolution. Our simulations suggest a relative time-series length between ten and five generations and a resolution of half a generation are the minimum requirements for accurate forecasting by abundance-based EWS. However, when trait information is included alongside abundance-based EWS, we find positive signals at lengths and resolutions half of what was required without them. We suggest that, in systems where specific traits are known to affect demography, trait data should be monitored and included alongside abundance data to improve forecasting reliability.

scholarly journals Data-driven identification of reliable sensor species to predict regime shifts in ecological networks

2020 ◽  
Vol 7 (8) ◽  
pp. 200896 ◽  
Author(s):  
Amin Ghadami ◽  
Shiyang Chen ◽  
Bogdan I. Epureanu
Keyword(s):  
Indicator Species ◽  
Early Warning ◽  
Regime Shifts ◽  
Data Driven ◽  
Warning Signals ◽  
Early Warning Signals ◽  
Critical Transitions ◽  
Spatially Distributed ◽  
Data Driven Approach ◽  
Interacting Components

Signals of critical slowing down are useful for predicting impending transitions in ecosystems. However, in a system with complex interacting components not all components provide the same quality of information to detect system-wide transitions. Identifying the best indicator species in complex ecosystems is a challenging task when a model of the system is not available. In this paper, we propose a data-driven approach to rank the elements of a spatially distributed ecosystem based on their reliability in providing early-warning signals of critical transitions. The proposed method is rooted in experimental modal analysis techniques traditionally used to identify structural dynamical systems. We show that one could use natural system fluctuations and the system responses to small perturbations to reveal the slowest direction of the system dynamics and identify indicator regions that are best suited for detecting abrupt transitions in a network of interacting components. The approach is applied to several ecosystems to demonstrate how it successfully ranks regions based on their reliability to provide early-warning signals of regime shifts. The significance of identifying the indicator species and the challenges associated with ranking nodes in networks of interacting components are also discussed.

scholarly journals Dynamics of sleep: Exploring critical transitions and early warning signals

2020 ◽  
Vol 193 ◽  
pp. 105448
Author(s):  
Susanne M.M. de Mooij ◽  
Tessa F. Blanken ◽  
Raoul P.P.P. Grasman ◽  
Jennifer R. Ramautar ◽  
Eus J.W. Van Someren ◽  
...  
Keyword(s):  
Early Warning ◽  
Warning Signals ◽  
Early Warning Signals ◽  
Critical Transitions

scholarly journals Several Indicators of Critical Transitions for Complex Diseases Based on Stochastic Analysis

2017 ◽  
Vol 2017 ◽  
pp. 1-10 ◽  
Author(s):  
Gang Wang ◽  
Yuanyuan Li ◽  
Xiufen Zou
Keyword(s):  
Early Warning ◽  
Self Assembly ◽  
Disease Onset ◽  
Complex Diseases ◽  
Critical Threshold ◽  
Warning Signals ◽  
Early Warning Signals ◽  
Critical Transitions ◽  
Development And Differentiation ◽  
Quantitative Changes

Many complex diseases (chronic disease onset, development and differentiation, self-assembly, etc.) are reminiscent of phase transitions in a dynamical system: quantitative changes accumulate largely unnoticed until a critical threshold is reached, which causes abrupt qualitative changes of the system. Understanding such nonlinear behaviors is critical to dissect the multiple genetic/environmental factors that together shape the genetic and physiological landscape underlying basic biological functions and to identify the key driving molecules. Based on stochastic differential equation (SDE) model, we theoretically derive three statistical indicators, that is, coefficient of variation (CV), transformed Pearson’s correlation coefficient (TPC), and transformed probability distribution (TPD), to identify critical transitions and detect the early-warning signals of the phase transition in complex diseases. To verify the effectiveness of these early-warning indexes, we use high-throughput data for three complex diseases, including influenza caused by either H3N2 or H1N1 and acute lung injury, to extract the dynamical network biomarkers (DNBs) responsible for catastrophic transition into the disease state from predisease state. The numerical results indicate that the derived indicators provide a data-based quantitative analysis for early-warning signals for critical transitions in complex diseases or other dynamical systems.

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