scholarly journals The role of host promiscuity in the invasion process of a seaweed holobiont

2021 ◽  
Author(s):  
Guido Bonthond ◽  
Till Bayer ◽  
Stacy A. Krueger-Hadfield ◽  
Nadja Stärck ◽  
Gaoge Wang ◽  
...  
Keyword(s):  
Microbial Communities ◽  
Beta Diversity ◽  
Common Garden ◽  
Plant Invasions ◽  
Invasion Process ◽  
Microbial Succession ◽  
Invasive Seaweed ◽  
Native Populations ◽  
Important Trait ◽  
Different Populations

AbstractInvasive species are co-introduced with microbiota from their native range and also interact with microbiota found in the novel environment to which they are introduced. Host flexibility toward microbiota, or host promiscuity, is an important trait underlying terrestrial plant invasions. To test whether host promiscuity may be important in macroalgal invasions, we experimentally simulated an invasion in a common garden setting, using the widespread invasive macroalga Agarophyton vermiculophyllum as a model invasive seaweed holobiont. After disturbing the microbiota of individuals from native and non-native populations with antibiotics, we monitored the microbial succession trajectories in the presence of a new source of microbes. Microbial communities were strongly impacted by the treatment and changed compositionally and in terms of diversity but recovered functionally by the end of the experiment in most respects. Beta-diversity in disturbed holobionts strongly decreased, indicating that different populations configure more similar –or more common– microbial communities when exposed to the same conditions. This decline in beta-diversity occurred not only more rapidly, but was also more pronounced in non-native populations, while individuals from native populations retained communities more similar to those observed in the field. This study demonstrates that microbial communities of non-native A. vermiculophyllum are more flexibly adjusted to the environment and suggests that an intraspecific increase in host promiscuity has promoted the invasion process of A. vermiculophyllum. This phenomenon may be important among invasive macroalgal holobionts in general.

scholarly journals Diversity Indices of Plant Communities and Their Rhizosphere Microbiomes: An Attempt to Find the Connection

2021 ◽  
Vol 9 (11) ◽  
pp. 2339
Author(s):  
Aleksei O. Zverev ◽  
Arina A. Kichko ◽  
Aleksandr G. Pinaev ◽  
Nikolay A. Provorov ◽  
Evgeny E. Andronov
Keyword(s):  
Microbial Communities ◽  
Plant Communities ◽  
Plant Diversity ◽  
Beta Diversity ◽  
Mutual Influence ◽  
Plant Root ◽  
Alpha Diversity ◽  
Diversity Indices ◽  
Alpha And Beta Diversity ◽  
Highly Correlated

The rhizosphere community represents an “ecological interface” between plant and soil, providing the plant with a number of advantages. Despite close connection and mutual influence in this system, the knowledge about the connection of plant and rhizosphere diversity is still controversial. One of the most valuable factors of this uncertainty is a rough estimation of plant diversity. NGS sequencing can make the estimations of the plant community more precise than classical geobotanical methods. We investigate fallow and crop sites, which are similar in terms of environmental conditions and soil legacy, yet at the same time are significantly different in terms of plant diversity. We explored amplicons of both the plant root mass (ITS1 DNA) and the microbial communities (16S rDNA); determined alpha- and beta-diversity indices and their correlation, and performed differential abundance analysis. In the analysis, there is no correlation between the alpha-diversity indices of plants and the rhizosphere microbial communities. The beta-diversity between rhizosphere microbial communities and plant communities is highly correlated (R = 0.866, p = 0.01). ITS1 sequencing is effective for the description of plant root communities. There is a connection between rhizosphere communities and the composition of plants, but on the alpha-diversity level we found no correlation. In the future, the connection of alpha-diversities should be explored using ITS1 sequencing, even in more similar plant communities—for example, in different synusia.

scholarly journals Ecological networks reveal contrasting patterns of bacterial and fungal communities in glacier-fed streams in Central Asia

2019 ◽  
Author(s):  
Ze Ren ◽  
Hongkai Gao
Keyword(s):  
Bacterial Community ◽  
Microbial Communities ◽  
Central Asia ◽  
Fungal Community ◽  
Bacterial Communities ◽  
Beta Diversity ◽  
Hydrological Modeling ◽  
Alpha Diversity ◽  
Environmental Variation ◽  
Fungal Communities

Bacterial and fungal communities in biofilms are important components in driving biogeochemical processes in stream ecosystems. Previous studies have well documented the patterns of bacterial alpha diversity in stream biofilms in glacier-fed streams, where, however, beta diversity of the microbial communities has received much less attention especially considering both bacterial and fungal communities. A focus on beta diversity can provide insights into the mechanisms driving community changes associated to large environmental fluctuations and disturbances, such as in glacier-fed streams. Moreover, modularity of co-occurrence networks can reveal more ecological and evolutionary properties of microbial communities beyond taxonomic groups. Here, integrating beta diversity and co-occurrence approach, we explored the network topology and modularity of the bacterial and fungal communities with consideration of environmental variation in glacier-fed streams in Central Asia. Combining results from hydrological modeling and normalized difference of vegetation index, this study highlighted that hydrological variables and vegetation status are major variables determining the environmental heterogeneity of glacier-fed streams. Bacterial communities formed a more complex and connected network, while the fungal communities formed a more clustered network. Moreover, the strong interrelations among the taxonomic dissimilarities of bacterial community and modules suggest they had common processes in driving diversity and taxonomic compositions across the heterogeneous environment. In contrast, fungal community and modules generally showed distinct driving processes to each other. Moreover, bacterial and fungal communities also had different driving processes. Furthermore, the variation of bacterial community and modules were strongly correlated with hydrological properties and vegetation status but not with nutrients, while fungal community and modules (except one module) were not associated with environmental variation. Our results suggest that bacterial and fungal communities had distinct mechanisms in structuring microbial networks, and environmental variation had strong influences on bacterial communities but not on fungal communities. The fungal communities have unique assembly mechanisms and physiological properties which might lead to their insensitive responses to environmental variations compared to bacterial communities. Overall, beyond alpha diversity in previous studies, these results add our knowledge that bacterial and fungal communities have contrasting assembly mechanisms and respond differently to environmental variation in glacier-fed streams.

scholarly journals Ecological networks reveal contrasting patterns of bacterial and fungal communities in glacier-fed streams in Central Asia

2019 ◽  
Author(s):  
Ze Ren ◽  
Hongkai Gao
Keyword(s):  
Bacterial Community ◽  
Microbial Communities ◽  
Central Asia ◽  
Fungal Community ◽  
Bacterial Communities ◽  
Beta Diversity ◽  
Hydrological Modeling ◽  
Alpha Diversity ◽  
Environmental Variation ◽  
Fungal Communities

Bacterial and fungal communities in biofilms are important components in driving biogeochemical processes in stream ecosystems. Previous studies have well documented the patterns of bacterial alpha diversity in stream biofilms in glacier-fed streams, where, however, beta diversity of the microbial communities has received much less attention especially considering both bacterial and fungal communities. A focus on beta diversity can provide insights into the mechanisms driving community changes associated to large environmental fluctuations and disturbances, such as in glacier-fed streams. Moreover, modularity of co-occurrence networks can reveal more ecological and evolutionary properties of microbial communities beyond taxonomic groups. Here, integrating beta diversity and co-occurrence approach, we explored the network topology and modularity of the bacterial and fungal communities with consideration of environmental variation in glacier-fed streams in Central Asia. Combining results from hydrological modeling and normalized difference of vegetation index, this study highlighted that hydrological variables and vegetation status are major variables determining the environmental heterogeneity of glacier-fed streams. Bacterial communities formed a more complex and connected network, while the fungal communities formed a more clustered network. Moreover, the strong interrelations among the taxonomic dissimilarities of bacterial community and modules suggest they had common processes in driving diversity and taxonomic compositions across the heterogeneous environment. In contrast, fungal community and modules generally showed distinct driving processes to each other. Moreover, bacterial and fungal communities also had different driving processes. Furthermore, the variation of bacterial community and modules were strongly correlated with hydrological properties and vegetation status but not with nutrients, while fungal community and modules (except one module) were not associated with environmental variation. Our results suggest that bacterial and fungal communities had distinct mechanisms in structuring microbial networks, and environmental variation had strong influences on bacterial communities but not on fungal communities. The fungal communities have unique assembly mechanisms and physiological properties which might lead to their insensitive responses to environmental variations compared to bacterial communities. Overall, beyond alpha diversity in previous studies, these results add our knowledge that bacterial and fungal communities have contrasting assembly mechanisms and respond differently to environmental variation in glacier-fed streams.

Testing mate recognition through reciprocal crosses of two native populations of the whitefly Bemisia tabaci (Gennadius) in Australia

2019 ◽  
Vol 110 (3) ◽  
pp. 328-339 ◽  
Author(s):  
W. Wongnikong ◽  
S. L. van Brunschot ◽  
J. P. Hereward ◽  
P. J. De Barro ◽  
G. H. Walter
Keyword(s):  
Bemisia Tabaci ◽  
Critical Role ◽  
Mate Recognition ◽  
Distinct Species ◽  
Species Status ◽  
Female Progeny ◽  
Native Populations ◽  
Different Populations ◽  
The Individual ◽  
Mating Tests

AbstractBemisia tabaci (Gennadius) represents a relatively large cryptic species complex. Australia has at least two native populations of B. tabaci sensu lato and these were first found on different host plants in different parts of Australia. The species status of these populations has not been resolved, although their mitochondrial sequences differ by 3.82–4.20%. We addressed the question of whether these AUSI and AUSII B. tabaci populations are distinct species. We used reciprocal cross-mating tests to establish whether the insects from these different populations recognize one another as potential mating partners. The results show that the two native Australian populations of B. tabaci have a mating sequence with four phases, each of which is described. Not all pairs in the control crosses mated and the frequency of mating differed across them. Some pairs in the AUSI-M × AUSII-F did mate (15%) and did produce female progeny, but the frequency was extremely low relative to controls. Microsatellite genotyping of the female progeny produced in the crosses showed these matings were successful. None of the AUSII-M × AUSI-F crosses mated although some of the males did search for females. These results demonstrate the critical role of the mate recognition process and the need to assess this directly in cross-mating tests if the species status of different populations is to be tested realistically. In short, AUSI and AUSII B. tabaci populations are distinct species because the individual males and females do not recognize individuals of the alternative population as potential mating partners.

scholarly journals Species-specific effects of plant invasions on activity, biomass, and composition of soil microbial communities

2016 ◽  
Vol 52 (6) ◽  
pp. 841-852 ◽  
Author(s):  
Anna M. Stefanowicz ◽  
Małgorzata Stanek ◽  
Marcin Nobis ◽  
Szymon Zubek
Keyword(s):  
Microbial Communities ◽  
Soil Microbial Communities ◽  
Plant Invasions ◽  
Soil Microbial ◽  
Specific Effects ◽  
Species Specific

scholarly journals Root flavonoids are related to enhanced AMF colonization of an invasive tree

AoB Plants ◽  
2020 ◽  
Vol 12 (1) ◽  
Author(s):  
Yingchun Pei ◽  
Evan Siemann ◽  
Baoliang Tian ◽  
Jianqing Ding
Keyword(s):  
Arbuscular Mycorrhizal Fungi ◽  
Invasive Plants ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Plant Invasions ◽  
Invasion Success ◽  
Chemical Mechanism ◽  
Introduced Populations ◽  
Native Populations ◽  
Invasive Tree

Abstract Arbuscular mycorrhizal fungi (AMF) are important mutualistic microbes in soil, which have capacity to form mutualistic associations with most land plants. Arbuscular mycorrhizal fungi play an important role in plant invasions and their interactions with invasive plants have received increasing attention. However, the chemical mechanisms underlying the interactions of AMF and invasive plants are still poorly understood. In this study we aim to test whether root secondary chemicals are related to enhanced AMF colonization and rapid growth in an invasive tree. We conducted a common garden experiment in China with Chinese tallow tree (Triadica sebifera) to examine the relationships among AMF colonization and secondary metabolites in roots of plants from introduced (USA) and native (China) populations. We found that AMF colonization rate was higher in introduced populations compared to native populations. Roots of plants from introduced populations had lower levels of phenolics and tannins, but higher levels of flavonoids than those of plants from native populations. Flavonoids were positively correlated with AMF colonization, and this relationship was especially strong for introduced populations. Besides, AMF colonization was positively correlated with plant biomass suggesting that higher root flavonoids and AMF colonization may impact plant performance. This suggests that higher root flavonoids in plants from introduced populations may promote AMF spore germination and/or attract hyphae to their roots, which may subsequently increase plant growth. Overall, our results support a scenario in which invasive plants enhance their AMF association and invasion success via genetic changes in their root flavonoid metabolism. These findings advance our understanding of the mechanisms underlying plant invasion success and the evolutionary interactions between plants and AMF. Understanding such mechanisms of invasive plant success is critical for predicting and managing plant invasions in addition to providing important insights into the chemical mechanism of AMF–plant interactions.

scholarly journals Profiling the microbial community structure and functional diversity of a dam-regulated river undergoing gravel bar restoration

2020 ◽  
Author(s):  
Joeselle M. Serrana ◽  
Bin Li ◽  
Tetsuya Sumi ◽  
Yasuhiro Takemon ◽  
Kozo Watanabe
Keyword(s):  
Microbial Community ◽  
Microbial Communities ◽  
Community Composition ◽  
Beta Diversity ◽  
Environmental Heterogeneity ◽  
Trinity River ◽  
Metabolic Functions ◽  
Gravel Bars ◽  
Gravel Bar ◽  
The Trinity

AbstractBackgroundRiver restoration efforts are expected to influence and change the diversity and functions of microbial communities following the recovery of habitat characteristics in the river ecosystem. The recreation or restoration of gravel bars in the Trinity River in California aims to rehabilitate the environmental heterogeneity downstream of the dam impounded channel. Here, we profiled the community composition, estimated diversity, and annotated putative metabolic functions of the sediment microbial communities to assess whether the construction and restoration of gravel bars in the Trinity River in California enhanced environmental heterogeneity, with the increase in the microbial beta diversity of these in-channel structures against the free-flowing reach of the main channel with comparison to its undisturbed tributaries.ResultsMicrobial community composition of the free-flowing (i.e., no gravel bars) communities were relatively closer regardless of dam influence, whereas the Trinity River gravel bar and tributaries’ gravel bar communities were highly dissimilar. Proteobacteria, Bacteroidetes, and Acidobacteria were the highly abundant sediment microbial phyla on most sites, specifically in the Trinity River gravel bar communities. Putative functional annotation of microbial taxa revealed that chemoheterotrophy and aerobic chemoheterotrophy were the most prevalent microbial processes, with the Trinity River gravel bars having relatively higher representations. The considerably large abundance of heterotrophic taxa implies that gravel bars provide suitable areas for heterotrophic microorganisms with metabolic functions contributing to the net respiration in the river.ConclusionsOur results provide supporting evidence on the positive impact of habitat restoration being conducted in the Trinity River with the non-dam influenced, undisturbed tributaries as the basis of comparison. Gravel bar recreation and restoration contributed to the increased microbial biodiversity through the restoration of environmental heterogeneity at the river scale. We provided valuable insights into the potential microbial processes in the sediment that might be contributing to the biogeochemical processes carried out by the microbial communities in the Trinity River. The significant positive correlation between the functional diversity of the identified microbial taxa and beta diversity suggests that differences in the detected metabolic functions were closely related to dissimilarities in community composition.

scholarly journals Invasive grass causes biotic homogenization in wetland birds

2021 ◽  
Author(s):  
Courtney Robichaud ◽  
Rebecca C Rooney
Keyword(s):  
Beta Diversity ◽  
Biosphere Reserve ◽  
Bird Community ◽  
Plant Invasions ◽  
Trophic Levels ◽  
Wetland Birds ◽  
Marsh Vegetation ◽  
Average Water ◽  
Water Depths ◽  
Total Beta

Plant invasions often lead to homogenization of the plant community, but the potential for plant invasions to cause homogenization of other trophic levels is under-studied in many systems. We tested whether the bird community in Phragmites australis-invaded marsh would exhibit spatial and temporal taxonomic homogenization compared to remnant cattail and meadow marsh. We compared the bird community using marsh invaded by P. australis and remnant, uninvaded marsh vegetation in a year with average water depths and a year with above-average water depths in the coastal marshes of a World Biosphere Reserve. Our results demonstrate strong evidence for spatial and temporal homogenization of the wetland bird community following P. australis invasion. The birds present in P. australis-invaded marsh were a nested subset of those present in remnant marsh, and total beta diversity decreased when water depths were above average. In contrast, total beta diversity was high in remnant marsh vegetation and stable between the two years. The distinctively structured vegetation zones in remnant (uninvaded) marsh yields structural complexity and habitat heterogeneity that supports greater taxonomic turnover in the bird community. Our study provides evidence that invasion by a plant has resulted in biological homogenization of the wetland bird community.

scholarly journals Herbivory may promote a non-native plant invasion at low but not high latitudes

2019 ◽  
Vol 124 (5) ◽  
pp. 819-827 ◽  
Author(s):  
Xinmin Lu ◽  
Minyan He ◽  
Saichun Tang ◽  
Yuqing Wu ◽  
Xu Shao ◽  
...  
Keyword(s):  
Invasive Species ◽  
Native Species ◽  
Invasive Plant ◽  
Field Survey ◽  
Common Garden ◽  
Middle Latitude ◽  
Plant Invasions ◽  
Alternanthera Philoxeroides ◽  
Native Plant ◽  
Low Latitude

Abstract Background and Aims The strengths of biotic interactions such as herbivory are expected to decrease with increasing latitude for native species. To what extent this applies to invasive species and what the consequences of this variation are for competition among native and invasive species remain unexplored. Here, herbivore impacts on the invasive plant Alternanthera philoxeroides and its competition with the native congener A. sessilis were estimated across latitudes in China. Methods An common garden experiment spanning ten latitudinal degrees was conducted to test how herbivore impacts on A. philoxeroides and A. sessilis, and competition between them change with latitude. In addition, a field survey was conducted from 21°N to 36.8°N to test whether A. philoxeroides invasiveness changes with latitude in nature as a result of variations in herbivory. Key Results In the experiment, A. sessilis cover was significantly higher than A. philoxeroides cover when they competed in the absence of herbivores, but otherwise their cover was comparable at low latitude. However, A. philoxeroides cover was always higher on average than A. sessilis cover at middle latitude. At high latitude, only A. sessilis emerged in the second year. Herbivore abundance decreased with latitude and A. philoxeroides emerged earlier than A. sessilis at middle latitude. In the field survey, the ratio of A. philoxeroides to A. sessilis cover was hump shaped with latitude. Conclusion These results indicate that herbivory may promote A. philoxeroides invasion only at low latitude by altering the outcome of competition in favour of the invader and point to the importance of other factors, such as earlier emergence, in A. philoxeroides invasion at higher latitudes. These results suggest that the key factors promoting plant invasions might change with latitude, highlighting the importance of teasing apart the roles of multiple factors in plant invasions within a biogeographic framework.

scholarly journals Bacteriocin Production: a Probiotic Trait?

2011 ◽  
Vol 78 (1) ◽  
pp. 1-6 ◽  
Author(s):  
Alleson Dobson ◽  
Paul D. Cotter ◽  
R. Paul Ross ◽  
Colin Hill
Keyword(s):  
Immune System ◽  
Microbial Communities ◽  
Bacteriocin Production ◽  
Host Immune System ◽  
Diverse Group ◽  
Probiotic Strains ◽  
Important Trait ◽  
The Impact ◽  
Selection Of

ABSTRACTBacteriocins are an abundant and diverse group of ribosomally synthesized antimicrobial peptides produced by bacteria and archaea. Traditionally, bacteriocin production has been considered an important trait in the selection of probiotic strains, but until recently, few studies have definitively demonstrated the impact of bacteriocin production on the ability of a strain to compete within complex microbial communities and/or positively influence the health of the host. Although research in this area is still in its infancy, there is intriguing evidence to suggest that bacteriocins may function in a number of ways within the gastrointestinal tract. Bacteriocins may facilitate the introduction of a producer into an established niche, directly inhibit the invasion of competing strains or pathogens, or modulate the composition of the microbiota and influence the host immune system. Here we review the role of bacteriocin production in complex microbial communities and their potential to enhance human health.

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