scholarly journals Molecular mechanism of lateral bud differentiation of Pinus massoniana based on high-throughput sequencing

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Hu Chen ◽  
Jianhui Tan ◽  
Xingxing Liang ◽  
Shengsen Tang ◽  
Jie Jia ◽  
...  
Keyword(s):  
Molecular Mechanism ◽  
Apical Dominance ◽  
High Throughput Sequencing ◽  
Pinus Massoniana ◽  
Side Branch ◽  
Gene Set Enrichment Analysis ◽  
Molecular Characteristics ◽  
Bud Development ◽  
Lateral Buds ◽  
Lateral Bud

AbstractKnot-free timber cultivation is an important goal of forest breeding, and lateral shoots affect yield and stem shape of tree. The purpose of this study was to analyze the molecular mechanism of lateral bud development by removing the apical dominance of Pinus massoniana young seedlings through transcriptome sequencing and identify key genes involved in lateral bud development. We analyzed hormone contents and transcriptome data for removal of apical dominant of lateral buds as well as apical and lateral buds of normal development ones. Data were analyzed using an comprehensive approach of pathway- and gene-set enrichment analysis, Mapman visualization tool, and gene expression analysis. Our results showed that the contents of auxin (IAA), Zea and strigolactone (SL) in lateral buds significantly increased after removal of apical dominance, while abscisic acid (ABA) decreased. Gibberellin (GA) metabolism, cytokinin (CK), jasmonic acid, zeatin pathway-related genes positively regulated lateral bud development, ABA metabolism-related genes basically negatively regulated lateral bud differentiation, auxin, ethylene, SLs were positive and negative regulation, while only A small number of genes of SA and BRASSINOSTEROID, such as TGA and TCH4, were involved in lateral bud development. In addition, it was speculated that transcription factors such as WRKY, TCP, MYB, HSP, AuxIAA, and AP2 played important roles in the development of lateral buds. In summary, our results provided a better understanding of lateral bud differentiation and lateral shoot formation of P. massoniana from transcriptome level. It provided a basis for molecular characteristics of side branch formation of other timber forests, and contributed to knot-free breeding of forest trees.

Apical dominance in the rhizome of Agropyron repens. Evidence of competition for carbohydrate as a factor in the mechanism of inhibition

1969 ◽  
Vol 47 (7) ◽  
pp. 1189-1197 ◽  
Author(s):  
Gordon I. McIntyre
Keyword(s):  
Apical Dominance ◽  
Sucrose Solution ◽  
Growth Potential ◽  
High Nitrogen ◽  
Experimental Conditions ◽  
Lateral Buds ◽  
Mechanism Of Inhibition ◽  
Lateral Bud ◽  
High Nitrogen Level ◽  
Agropyron Repens

When plants of Agropyron repens L. Beauv. are grown at a high nitrogen level (210 p.p.m. N) apical dominance in the rhizome is sufficiently reduced to permit the continued growth of the lateral buds. If, however, the rhizome is isolated from the parent shoot the dominance of the apex is markedly increased and lateral bud growth is strongly inhibited.Experiments with these isolated, high-nitrogen rhizomes showed that apical dominance could be significantly reduced either by increasing the length of the rhizome or by retarding the growth of the rhizome apex by exposing it to light. The growth potential of the lateral buds declined rapidly as the duration of their attachment to the rhizome apex was increased. This effect was associated with the translocation of carbohydrate to the rhizome apex and could be overcome by providing the isolated buds with a 2% sucrose solution. When buds were isolated from the rhizome apex before their growth potential was exhausted a marked increase in their carbohydrate content was apparent after 48 h. This increase was associated with their resumption of growth. Buds still attached to the apex could be released from inhibition by supplying sucrose solutions to the cut end of the rhizome.The results suggest that, under the experimental conditions, apical dominance was due primarily to competition for a limited carbohydrate supply.

scholarly journals 760 PB 184 INDOLE-3-ACETIC ACID REGULATES APICAL DOMINANCE BY CONTROLLING THE STATE OF WATER AND MEMBRANE LIPID COMPOSITION IN BUDS OF MALUS DOMESTICA BORKH

HortScience ◽  
1994 ◽  
Vol 29 (5) ◽  
pp. 541h-542
Author(s):  
Shiow Y. Wang ◽  
Miklos Faust ◽  
Michael J. Line
Keyword(s):  
Acetic Acid ◽  
Lipid Composition ◽  
Apical Dominance ◽  
Membrane Lipid ◽  
Proton Density ◽  
Membrane Lipid Composition ◽  
Lateral Buds ◽  
Terminal Bud ◽  
Lateral Bud ◽  
Indole 3 Acetic Acid

The effect of Indole-3-acetic acid (IAA) on apical dominance in apple (Malus domestica Borkh.) buds was examined by studying changes In proton density (free water) and membrane lipid composition in lateral buds. Decapitation induced budbreak and enhanced lateral bud growth. IAA replaced apical control of lateral bud paradormancy. Maximal inhibition was obtained when IAA was applied immediately after the apical bud was removed. Delaying this application weakens the effect of IAA. An increase in proton density in lateral buds was observable 2 days after decapitation, whereas the change in membrane lipid composition occurred 4 days later. Decapitating the terminal bud induced an increase in membrane galacto- and phospholipids. and the ratio of unsaturated to corresponding saturated fatty acids. Decapitation also induced a decrease in the ratio of free sterols to phospholipids in lateral buds. Application of IAA to the terminal end of decapitated shoots inhibited the increase of proton density and prevented changes in the membrane lipid composition of lateral buds.

scholarly journals Transcriptome analysis of lateral buds from Phyllostachys edulis rhizome during germination and early shoot stages

2019 ◽  
Author(s):  
Yuting Shou ◽  
Yihua Zhu ◽  
Yulong Ding
Keyword(s):  
High Throughput Sequencing ◽  
Stem Elongation ◽  
Rapid Development ◽  
Sugar Metabolism ◽  
Development Stage ◽  
Moso Bamboo ◽  
Phyllostachys Edulis ◽  
Lateral Buds ◽  
Meristem Development ◽  
Lateral Bud

Abstract The vegetative growth is an important stage for plants when they conduct photosynthesis, accumulate and collect all resources needed and prepare for reproduction stage. Bamboo is one of the fastest growing plant species. The rapid growth of Phyllostachys edulis results from the expansion of intercalary meristem at the basal part of nodes, which are differentiated from the apical meristem of rhizome lateral buds. However, little is known about the major signaling pathways and players involved during this rapid development stage of bamboo. To study this question, we adopted the high-throughput sequencing technology and compared the transcriptomes of Moso bamboo rhizome buds in germination stage and late development stage. We found that the development of Moso bamboo rhizome lateral buds was coordinated by multiple pathways, including meristem development, sugar metabolism and phytohormone signaling. Phytohormones have fundamental impacts on the plant development. We found the evidence of several major hormones participating in the development of Moso bamboo rhizome lateral bud. Furthermore, we showed direct evidence that Gibberellic Acids (GA) signaling participated in the Moso bamboo stem elongation. Together, these results expand our knowledge on the Moso bamboo internodes fast growth and provide research basis for further study.

Growth of dormant buds on severed rhizomes of Calamagrostis canadensis

1991 ◽  
Vol 71 (4) ◽  
pp. 1093-1099 ◽  
Author(s):  
R. A. Powelson ◽  
V. J. Lieffers
Keyword(s):  
Key Words ◽  
Apical Dominance ◽  
Carbohydrate Content ◽  
Axillary Buds ◽  
Regeneration Potential ◽  
Bud Development ◽  
Calamagrostis Canadensis ◽  
Lateral Buds ◽  
Loam Soil ◽  
Shoot Base

The regeneration potential and dormancy of lateral buds on rhizome segments near the parent shoot base or the distal rhizome apex of Calamagrostis canadensis were assessed. Apical and basal segments of various length, with and without the parental shoot base or rhizome apex attached, were planted 1 cm deep in loam soil. When the apex or base was attached axillary buds on the rhizome usually remained dormant. When the parental shoot base was excised, the bud closest to the rhizome base was more likely to sprout than more distal buds. When the apex was excised from the apical segments, more axillary buds emerged but no priority of bud development arose. Buds near the apex position generally had a higher frequency of sprouting than buds adjacent to the parental base. Rhizome segments adjacent to the apex were heavier and had a higher nonstructural carbohydrate content than rhizome segments adjacent to the parental base. Key words: Calamagrostis canadensis, rhizome, dormancy, apical dominance, competition

scholarly journals How Does Endometriosis Lead to Ovarian Cancer? The Molecular Mechanism of Endometriosis-Associated Ovarian Cancer Development

Cancers ◽  
2021 ◽  
Vol 13 (6) ◽  
pp. 1439
Author(s):  
Nozomi Yachida ◽  
Kosuke Yoshihara ◽  
Manako Yamaguchi ◽  
Kazuaki Suda ◽  
Ryo Tamura ◽  
...  
Keyword(s):  
Ovarian Cancer ◽  
Molecular Mechanism ◽  
High Throughput Sequencing ◽  
Current Knowledge ◽  
Gene Mutations ◽  
Cancer Development ◽  
Molecular Characteristics ◽  
Ovarian Endometriosis ◽  
Normal Endometrium ◽  
Uterine Endometrium

Numerous epidemiological and histopathological studies support the notion that clear cell and endometrioid carcinomas derive from ovarian endometriosis. Accordingly, these histologic types are referred to as “endometriosis-associated ovarian cancer” (EAOC). Although the uterine endometrium is also considered an origin of endometriosis, the molecular mechanism involved in transformation of the uterine endometrium to EAOC via ovarian endometriosis has not yet been clarified. Recent studies based on high-throughput sequencing technology have revealed that cancer-associated gene mutations frequently identified in EAOC may exist in the normal uterine endometrial epithelium and ovarian endometriotic epithelium. The continuum of genomic alterations from the uterine endometrium to endometriosis and EAOC has been described, though the significance of cancer-associated gene mutations in the uterine endometrium or endometriosis remains unclear. In this review, we summarize current knowledge regarding the molecular characteristics of the uterine endometrium, endometriosis, and EAOC and discuss the molecular mechanism of cancer development from the normal endometrium through endometriosis in an effort to prevent EAOC.

scholarly journals Apical Dominance in Apple (Malus domestica Borkh): The Possible Role of Indole-3-Acetic Acid (IAA)

1994 ◽  
Vol 119 (6) ◽  
pp. 1215-1221 ◽  
Author(s):  
Shiow Y. Wang ◽  
Miklos Faust ◽  
Michael J. Line
Keyword(s):  
Lipid Composition ◽  
Apical Dominance ◽  
Saturated Fatty Acids ◽  
Membrane Lipid ◽  
Proton Density ◽  
Membrane Lipid Composition ◽  
Lateral Buds ◽  
Terminal Bud ◽  
Lateral Bud ◽  
Bud Growth

The effect of IAA on apical dominance in apple buds was examined in relation to changes in proton density (free water) and membrane lipid composition in lateral buds. Decapitation induced budbreak and enhanced lateral bud growth. IAA replaced apical control of lateral buds and maintained paradormancy. Maximal inhibition was obtained when IAA was applied immediately after the apical bud was removed; delaying application reduced the effect of IAA. An increase in proton density in lateral buds was observed 2 days after decapitation, whereas the change in membrane lipid composition occurred 4 days later. Removing the terminal bud increased membrane galacto- and phospholipids and the ratio of unsaturated to corresponding saturated fatty acids. Decapitation also decreased the ratio of free sterols to phospholipids in lateral buds. Applying thidiazuron to lateral buds of decapitated shoots enhanced these effects, whereas applying IAA to the terminal end of decapitated shoots inhibited the increase of proton density and prevented changes in membrane lipid composition in lateral buds. These results suggest that change in water movement alters membrane lipid composition and then induces lateral bud growth. IAA, presumably produced by the terminal bud, restricts the movement of water to lateral buds and inhibits their growth in apple.

scholarly journals Transcriptome analysis of lateral buds from Phyllostachys edulis rhizome during germination and early shoot stages

2019 ◽  
Author(s):  
Yuting Shou ◽  
Yihua Zhu ◽  
Yulong Ding
Keyword(s):  
High Throughput Sequencing ◽  
Stem Elongation ◽  
Rapid Development ◽  
Sugar Metabolism ◽  
Development Stage ◽  
Moso Bamboo ◽  
Phyllostachys Edulis ◽  
Lateral Buds ◽  
Meristem Development ◽  
Lateral Bud

Abstract The vegetative growth is an important stage for plants when they conduct photosynthesis, accumulate and collect all resources needed and prepare for reproduction stage. Bamboo is one of the fastest growing plant species. The rapid growth of Phyllostachys edulis results from the expansion of intercalary meristem at the basal part of nodes, which are differentiated from the apical meristem of rhizome lateral buds. However, little is known about the major signaling pathways and players involved during this rapid development stage of bamboo. To study this question, we adopted the high-throughput sequencing technology and compared the transcriptomes of Moso bamboo rhizome buds in germination stage and late development stage. We found that the development of Moso bamboo rhizome lateral buds was coordinated by multiple pathways, including meristem development, sugar metabolism and phytohormone signaling. Phytohormones have fundamental impacts on the plant development. We found the evidence of several major hormones participating in the development of Moso bamboo rhizome lateral bud. Furthermore, we showed direct evidence that Gibberellic Acids (GA) signaling participated in the Moso bamboo stem elongation. Together, these results expand our knowledge on the Moso bamboo internodes fast growth and provide research basis for further study.

Penicillin inhibition of release of lateral buds of gram (Cicer arietinum) seedlings from apical dominance

1984 ◽  
Vol 62 (11) ◽  
pp. 2391-2393
Author(s):  
Monidipa Sen ◽  
Subires Bhattacharya ◽  
S. Mukherji
Keyword(s):  
Cicer Arietinum ◽  
Mode Of Action ◽  
Apical Dominance ◽  
Maleic Hydrazide ◽  
Simultaneous Application ◽  
Auxin Action ◽  
Cicer Arietinum L ◽  
Lateral Buds ◽  
Lateral Bud ◽  
Bud Growth

The effect of penicillin on apical dominance was investigated in gram (Cicer arietinum L.) seedlings. Application of penicillin to the decapitated stump was found to reestablish apical dominance in preventing the growth of lateral buds. Penicillin was seen to mimic auxin action in this system. Penicillin inhibition of lateral bud growth was relieved by the simultaneous application of antiauxins like 2,3,5-triiodobenzoic acid and maleic hydrazide. An increase in auxin-synthesizing capacity of the treated tissue has been suggested as the possible mode of action of penicillin in the regulation of lateral bud growth.

scholarly journals On the inhibition of bud development and other functions of growth substance in vicia faba

1934 ◽  
Vol 114 (789) ◽  
pp. 317-339 ◽  
Keyword(s):  
Cell Division ◽  
Growth Substance ◽  
Bud Development ◽  
Inhibiting Action ◽  
Lateral Buds ◽  
Terminal Bud ◽  
Lateral Bud ◽  
Young Leaves ◽  
Preliminary Communication ◽  
Growth Promoting

It is well known that when the growing point of a young dicotyledonons plant is removed, the axillary buds lower down the stem grow out strongly, and eventually take the place of main stem. The presence of the terminal bud thus exercises an inhibiting action on the development of the lateral buds, causing them to remain dormant. To a smaller extent the leaves also inhibit the development of buds in their axils, as was shown by Dorsál (1909). The phenomenon has been studied by many workers, among others by Snow, who found (1929, a ) that the rapidly growing young leaves in the terminal bud were the most active in inhibiting development of the axilllaries. It appears also, from our experiments, that the rapid growth of a lateral bud is accompanied by inhibition of the bud immediately below it, and a similar behaviour of opposite buds was observed by Dorsál (1926). In a brief preliminary communication (Thimann and Skoog, 1933) it was shown that the inhibiting action of the terminal bud can be imitated by applying the growth substance ("auxin" or "Wuchsstoff") to decapitated plants. These experiments, and others, will now be described more fully; further, the relation between the growth promoting action of growth substance and its effect on bud inhibition will be considered. The first evidence that the inhibition of lateral bud development might be caused by a special substance was brought forward by Snow (1929, b ). The work to be described here proves that inhibition can be caused in this way, and shows that the inhibiting substance is almost certainly identical with the hgrowth substance. Literature on the growth substance need not be discussed here (see Nielsen, 1930; du Buy and Nuernbergk, 1932; Thimann and Bonner , 1933); it is only necessary to mention that the substance promotes growth by cell elongation and not by cell division. On this account it has been principally studied in the Avena coleoptile, in which it is produced in the tip and transported in a polar manner towards the base.

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