Topological units of environmental signal processing in the transcriptional regulatory network of Escherichia coli

Environmental Signal ◽

Functional organisation of Escherichia coli transcriptional regulatory network

Journal of Molecular Biology ◽

10.1016/j.jmb.2008.05.054 ◽

2008 ◽

Vol 381 (1) ◽

pp. 238-247 ◽

Cited By ~ 80

Author(s):

Agustino Martínez-Antonio ◽

Sarath Chandra Janga ◽

Denis Thieffry

Keyword(s):

Escherichia Coli ◽

Regulatory Network ◽

Functional Organisation

Coordination logic of the sensing machinery in the transcriptional regulatory network of Escherichia coli

Nucleic Acids Research ◽

10.1093/nar/gkm743 ◽

2007 ◽

Vol 35 (20) ◽

pp. 6963-6972 ◽

Cited By ~ 16

Author(s):

Sarath Chandra Janga ◽

Heladia Salgado ◽

Agustino Martínez-Antonio ◽

Julio Collado-Vides

Keyword(s):

Escherichia Coli ◽

Regulatory Network ◽

Patterns of Subnet Usage Reveal Distinct Scales of Regulation in the Transcriptional Regulatory Network of Escherichia coli

PLoS Computational Biology ◽

10.1371/journal.pcbi.1000836 ◽

2010 ◽

Vol 6 (7) ◽

pp. e1000836 ◽

Cited By ~ 14

Author(s):

Carsten Marr ◽

Fabian J. Theis ◽

Larry S. Liebovitch ◽

Marc-Thorsten Hütt

Keyword(s):

Escherichia Coli ◽

Regulatory Network ◽

Faculty Opinions recommendation of The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1030005.351448 ◽

2005 ◽

Author(s):

John McKinney

Keyword(s):

Escherichia Coli ◽

Regulatory Network ◽

Functional States

Deciphering Fur transcriptional regulatory network highlights its complex role beyond iron metabolism in Escherichia coli

Nature Communications ◽

10.1038/ncomms5910 ◽

2014 ◽

Vol 5 (1) ◽

Cited By ~ 136

Author(s):

Sang Woo Seo ◽

Donghyuk Kim ◽

Haythem Latif ◽

Edward J. O’Brien ◽

Richard Szubin ◽

...

Keyword(s):

Escherichia Coli ◽

Iron Metabolism ◽

Regulatory Network ◽

An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifs

Nucleic Acids Research ◽

10.1093/nar/gkh1009 ◽

2004 ◽

Vol 32 (22) ◽

pp. 6643-6649 ◽

Cited By ~ 141

Author(s):

H.-W. Ma

Keyword(s):

Escherichia Coli ◽

Hierarchical Structure ◽

Regulatory Network ◽

Network Motifs ◽

RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions

Nucleic Acids Research ◽

10.1093/nar/gkj156 ◽

2006 ◽

Vol 34 (90001) ◽

pp. D394-D397 ◽

Cited By ~ 219

Author(s):

H. Salgado

Keyword(s):

Escherichia Coli ◽

Regulatory Network ◽

Growth Conditions ◽

Operon Organization ◽

K 12

The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states

Proceedings of the National Academy of Sciences ◽

10.1073/pnas.0505231102 ◽

2005 ◽

Vol 102 (52) ◽

pp. 19103-19108 ◽

Cited By ~ 68

Author(s):

C. L. Barrett ◽

C. D. Herring ◽

J. L. Reed ◽

B. O. Palsson

Keyword(s):

Escherichia Coli ◽

Regulatory Network ◽

Functional States

Molecular Mechanisms and Potential Treatment Targets for Ovarian Cancer by Analyzing Transcriptional Regulatory Network

Letters in Drug Design & Discovery ◽

10.2174/1570180813666160920122412 ◽

2016 ◽

Vol 14 (1) ◽

pp. 112-118

Author(s):

Fei Wu ◽

Xinrui Liu ◽

Yujie Sui ◽

Tianmin Xu ◽

Manhua Cui

Keyword(s):

Ovarian Cancer ◽

Regulatory Network ◽

Molecular Mechanisms ◽

Potential Treatment ◽

Treatment Targets ◽

Mathematical Model of a Telomerase Transcriptional Regulatory Network Developed by Cell-Based Screening: Analysis of Inhibitor Effects and Telomerase Expression Mechanisms

PLoS Computational Biology ◽

10.1371/journal.pcbi.1003448 ◽

2014 ◽

Vol 10 (2) ◽

pp. e1003448 ◽

Cited By ~ 11

Author(s):

Alan E. Bilsland ◽

Katrina Stevenson ◽

Yu Liu ◽

Stacey Hoare ◽

Claire J. Cairney ◽

...

Keyword(s):

Mathematical Model ◽

Regulatory Network ◽

Screening Analysis ◽