scholarly journals Systematics of Oreobates and the Eleutherodactylus discoidalis species group (Amphibia, Anura), based on two mitochondrial DNA genes and external morphology

2008 ◽  
Vol 152 (4) ◽  
pp. 737-773 ◽  
Author(s):  
JOSÉ M. PADIAL ◽  
JUAN C. CHAPARRO ◽  
IGNACIO DE LA RIVA
Keyword(s):  
Mitochondrial Dna ◽  
Species Group ◽  
External Morphology

Heteroplasmy due to coexistence of mtCOI haplotypes from different lineages of theThrips tabacicryptic species group

2017 ◽  
Vol 107 (4) ◽  
pp. 534-542 ◽  
Author(s):  
S.J. Gawande ◽  
S. Anandhan ◽  
A.A. Ingle ◽  
Alana Jacobson ◽  
R. Asokan
Keyword(s):  
Flow Cytometry ◽  
Mitochondrial Dna ◽  
Real Time Pcr ◽  
Copy Number ◽  
Species Complex ◽  
Species Group ◽  
Thrips Tabaci ◽  
Mitochondrial Cytochrome ◽  
Quantitative Real Time Pcr ◽  
Putative Species

AbstractHeteroplasmy is the existence of multiple mitochondrial DNA haplotypes within the cell. Although the number of reports of heteroplasmy is increasing for arthropods, the occurrence, number of variants, and origins are not well studied. In this research, the occurrence of heteroplasmy was investigated inThrips tabaci, a putative species complex whose lineages can be distinguished by their mitochondrial DNA haplotypes. The results from this study showed that heteroplasmy was due to the occurrence of mitochondrial cytochrome oxydase I (mtCOI) haplotypes from two differentT. tabacilineages. An assay using flow cytometry and quantitative real-time PCR was then used to quantify the per cell copy number of the two mtCOI haplotypes present in individuals exhibiting heteroplasmy from nine geographically distant populations in India. All of theT. tabaciindividuals in this study were found to exhibit heteroplasmy, and in every individual the per cell copy number of mtCOI from lineage 3 comprised 75–98% of the haplotypes detected and was variable among individuals tested. There was no evidence to suggest that the presense of lineage-specific haplotypes was due to nuclear introgression; however, further studies are needed to investigate nuclear introgression and paternal leakage during rare interbreeding between individuals from lineages 2 and 3.

MITOCHONDRIAL DNA PHYLOGENY OF THE PAPILIO MACHAON SPECIES GROUP (LEPIDOPTERA: PAPILIONIDAE)

1993 ◽  
Vol 125 (S165) ◽  
pp. 233-242 ◽  
Author(s):  
Felix A.H. Sperling
Keyword(s):  
Mitochondrial Dna ◽  
Endangered Species ◽  
Genetic Basis ◽  
Color Pattern ◽  
Species Group ◽  
Species Concepts ◽  
Mt Dna ◽  
Dna Phylogeny ◽  
Mtdna Phylogeny ◽  
Swallowtail Butterflies

AbstractIn swallowtail butterflies of the Papilio machaon species group, mitochondrial (mt) DNA divergence has allowed speciation and adaptation to be understood more precisely. The reconstructed phylogeny of mtDNA of the P. machaon group is largely congruent with prior systematic hypotheses based on allozymes and color pattern. Genetic divergences of mtDNA support use of broad, character-based species concepts for the P. machaon group, and allow inferences regarding the origin of hybrid populations. The mtDNA phylogeny provides a guide for evolutionarily appropriate comparisons in studies of the chemical and genetic basis of hostplant use. Finally, mtDNA demonstrates the phylogenetically distinct status of an endangered species, P. hospiton.

scholarly journals Phylogenetic relationships of the European newts (genus Triturus) tested with mitochondrial DNA sequence data

1999 ◽  
Vol 68 (2) ◽  
pp. 73-81 ◽  
Author(s):  
I. Zajc ◽  
J.W. Arntzen
Keyword(s):  
Mitochondrial Dna ◽  
Sequence Data ◽  
A Priori ◽  
Strong Support ◽  
Species Group ◽  
Rrna Genes ◽  
Sister Taxon ◽  
Phylogenetic Position ◽  
12S Rrna ◽  
16S Rrna Sequence

European newts (genus Triturus) are widely studied, but their phylogeny is not yet unambiguously resolved. Fragments of mitochondrial DNA experiencing different rates of evolution (the ATPase and 12S rRNA genes) were sequenced in order to test a phylogenetic hypothesis derived from biochemical and behavioral data. Well-supported branches of the existing phylogeny gained support in our study. The monophyletic origin of the hypothesized T. boscai – T. italicus clade remained ambiguous, whereas strong support was gained for the sister-taxon relationship of T. vulgaris and T. montandoni. The position of T. vittatus as a sister taxon to the T. marmoratus species group was also supported. The phylogenetic position of T. alpestris could not be clarified. With an in-group taxon sampling denser than in previous molecular phylogenetic studies and under the a priori selection of species from the genera Cynops, Neurergus and Paramesotriton as out-groups, the monophyly of Triturus was strongly supported. It cannot be excluded, however, that the presumed out-group actually belongs to the in-group, rendering Triturus paraphyletic as was concluded from recently published 12S and 16S rRNA sequence data.

scholarly journals Molecular phylogeny of the Taeniapterini (Diptera: Micropezidae) using nuclear and mitochondrial DNA, with a reclassification of the genus Taeniaptera Macquart

2015 ◽  
Vol 46 (5) ◽  
pp. 411-430 ◽  
Author(s):  
Morgan D. Jackson ◽  
Stephen A. Marshall ◽  
Jeffrey H. Skevington
Keyword(s):  
Mitochondrial Dna ◽  
Bayesian Inference ◽  
Molecular Phylogeny ◽  
Maximum Parsimony ◽  
New World ◽  
Molecular Data ◽  
Species Group ◽  
Mitochondrial Genes ◽  
Paraphyletic Group ◽  
Total Dna

DNA molecular data are used to generate a phylogeny for the micropezid subfamily Taeniapterinae. Thirty-two taeniapterine species were sampled, including 10 of the 20 New World genera recognized by Steyskal, as well as one genus formerly treated as a synonym of Poecilotylus Hennig (Hemichaeta Steyskal). Five species from the Micropezinae were included as outgroups. A total DNA dataset of 4705 bp, including mitochondrial genes (12S and cytochrome c oxidase I (COI)) and nuclear coding genes (wingless and CAD), was analysed using maximum parsimony and Bayesian inference. The genus Taeniaptera Macquart was found to be non-monophyletic with respect to the remainder of the Taeniapterini analysed here. Taeniaptera is restricted to the Taeniaptera trivittata Macquart species group, Mitromyia Cresson is resurrected to contain the Taeniaptera grata (Wulp) species group, and Paragrallomyia Hendel is resurrected to contain most species previously considered Taeniaptera. Poecilotylus is recognized as a paraphyletic group awaiting further research.

The Drosophila montium subgroup species. Phylogenetic relationships based on mitochondrial DNA analysis

Genome ◽  
1996 ◽  
Vol 39 (5) ◽  
pp. 874-883 ◽  
Author(s):  
Nikolas Nikolaidis ◽  
Zacharias G. Scouras
Keyword(s):  
Mitochondrial Dna ◽  
Phylogenetic Relationships ◽  
Phylogenetic Trees ◽  
Dna Analysis ◽  
Restriction Site ◽  
Species Group ◽  
The Other ◽  
Complex Species ◽  
Restriction Site Maps ◽  
Montium Subgroup

Mitochondrial DNA (mtDNA) restriction site maps for three Drosophila montium subgroup species of the melanogaster species group, inhabiting Indian and Afrotropical montium subgroup territories, were established. Taking into account previous mtDNA data concerning six oriental montium species, a phylogeny was established using distance-matrix and parsimony methods. Both genetic diversity and mtDNA size variations were found to be very narrow, suggesting close phylogenetic relationships among all montium species studied. The phylogenetic trees that were constructed revealed three main lineages for the montium subgroup species studied: one consisting of the Afrotropical species Drosophila seguyi, which is placed distantly from the other species, one comprising the north-oriental (Palearctic) species, and one comprising the southwestern (south-oriental, Australasian, Indian, and Afrotropical) species. The combination of the mtDNA data presented here with data from other species belonging to the melanogaster and obscura subgroups revealed two major clusters: melanogaster and obscura. The melanogaster cluster is further divided into two compact lineages, comprising the montium subgroup species and the melanogaster complex species; the species of the other complex of the melanogaster subgroup, yakuba, disperse among the obscura species. The above grouping is in agreement with the mtDNA size variations of the species. Overall, among all subgroups studied, the species of the montium subgroup seem to be the most closely related. Key words : mtDNA restriction site maps, mtDNA size variations, Drosophila, phylogeny.

The phylogenetic relationships of Paramesotriton (Caudata: Salamandridae) based on partial mitochondrial DNA gene sequences

Zootaxa ◽  
2012 ◽  
Vol 3150 (1) ◽  
pp. 59
Author(s):  
XIAOMING GU ◽  
HUI WANG ◽  
RONGRONG CHEN ◽  
YINGZHOU TIAN ◽  
SONG LI
Keyword(s):  
Mitochondrial Dna ◽  
Bayesian Inference ◽  
Maximum Likelihood ◽  
16S Rdna ◽  
Phylogenetic Relationships ◽  
Maximum Parsimony ◽  
Mitochondrial Gene ◽  
Sister Group ◽  
Species Group ◽  
Close Phylogenetic Relationship

We examined phylogenetic relationships among newst of the genus Paramesotriton using partial mitochondrial gene se-quences, including the ND2-tRNATyr region (1415 bp) and the 12S rDNA-tRNAVal -16S rDNA region (1774 bp), from 42individuals of 10 recognized Paramesotriton species and outgroups by Bayesian inference (BI), Maximum likelihood(ML) and Maximum Parsimony (MP) methods. We found that, (1) Laotriton laoensis is the sister group of Paramesotri-ton, (2) the genus Paramesotriton is monophyletic, composed of either the P. caudopunctatus species group and the P.chinensis species group, or the subgenera Allomesotriton and Paramesotriton (3) P. longliensis and P. zhijinensis shouldbe placed in the P. caudopunctatus species group or subgenus Allomesotriton; (4) P. fuzhongensis is not a junior synonym of P. chinensis, and there is a close phylogenetic relationship between P. fuzhongensis and P. guangxiensis.

scholarly journals Canuschiza of Socotra Island (Coleoptera: Scarabaeidae: Melolonthinae) Part 2. Canuschiza minuta species group

2017 ◽  
Vol 57 (Suppl.) ◽  
pp. 77-86
Author(s):  
Richard Sehnal ◽  
David Král ◽  
Aleš Bezděk
Keyword(s):  
Male Genitalia ◽  
Species Group ◽  
Identification Key ◽  
External Morphology ◽  
Socotra Island ◽  
Males And Females

The Canuschiza minuta species group of the genus Canuschiza is revised. Canuschiza zerig sp. nov. and previously unknown female of C. minuta are described. Variability in number of antennomeres observed in females of C. minuta is briefly discussed. An identification key to males and females of the species group is provided, and photographs illustrate external morphology and male genitalia.

scholarly journals Taxonomic review of the Dichotomius (Luederwaldtinia) agenor species group (Coleoptera: Scarabaeidae: Scarabaeinae)

2021 ◽  
Vol 734 ◽  
pp. 1-64 ◽  
Author(s):  
Santiago Montoya-Molina ◽  
Fernando Z. Vaz-de-Mello
Keyword(s):  
New Species ◽  
Costa Rica ◽  
Male Genitalia ◽  
Species Group ◽  
External Morphology ◽  
Type Specimens ◽  
Mato Grosso ◽  
New Synonym ◽  
Species Descriptions ◽  
Group D

The Neotropical D. agenor species group of the subgenus Luederwaldtinia Martínez, 1951 is taxonomically reviewed. After examination of specimens in collections, the D. agenor species group will consist of seventeen species, a leap from the former nine species: D. agenor (Harold, 1869), D. amplicollis (Harold, 1869), D. belus (Harold, 1880), D. centralis (Harold, 1869), D. deyrollei (Harold, 1869), D. sagittarius (Harold, 1869) stat. rev., D. tristis (Luederwaldt, 1923), D. triquetrus (Luederwaldt, 1923), D. validipilosus (Luederwaldt, 1931), D. fornicatus (Luederwaldt, 1931) [transferred to D. lucasi species group and to which D. bosqi (Pereira, 1941) is considered to be a new synonym], D. inachoides (Felsche, 1901) [transferred from the group fisus (Selenocopris)], D. simplicicornis (Luederwaldt, 1935) [transferred from the group fisus (Selenocopris)], D. subaeneus (Castelnau, 1840) [transferred from the D. carbonarius species group], D. rafanunezi sp. nov. from Mato Grosso, D. henripittieri sp. nov. from Venezuela and D. enioi sp. nov. from Guatemala and Costa Rica. This review was based on external morphology and characters of the male genitalia (aedeagus and internal sac). Descriptions of new species and redescriptions were made after examining the type-specimens of the already described species. Lectotype designations, species revalidations, redescriptions and new species descriptions are provided.

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