A Gene Network Simulator to Assess Reverse Engineering Algorithms

2009 ◽  
Vol 1158 (1) ◽  
pp. 125-142 ◽  
Author(s):  
Barbara Di Camillo ◽  
Gianna Toffolo ◽  
Claudio Cobelli
Keyword(s):  
Reverse Engineering ◽  
Gene Network ◽  
Network Simulator

scholarly journals SJARACNe: a scalable software tool for gene network reverse engineering from big data

2018 ◽  
Vol 35 (12) ◽  
pp. 2165-2166 ◽  
Author(s):  
Alireza Khatamian ◽  
Evan O Paull ◽  
Andrea Califano ◽  
Jiyang Yu
Keyword(s):  
Big Data ◽  
Reverse Engineering ◽  
Gene Network ◽  
Software Tool ◽  
Scalable Software

scholarly journals Reverse Engineering Gene Network Identifies New Dysferlin-interacting Proteins

2010 ◽  
Vol 286 (7) ◽  
pp. 5404-5413 ◽  
Author(s):  
Mafalda Cacciottolo ◽  
Vincenzo Belcastro ◽  
Steve Laval ◽  
Kate Bushby ◽  
Diego di Bernardo ◽  
...  
Keyword(s):  
Reverse Engineering ◽  
Gene Network ◽  
Interacting Proteins

scholarly journals ARACNe-AP: gene network reverse engineering through adaptive partitioning inference of mutual information

2016 ◽  
Vol 32 (14) ◽  
pp. 2233-2235 ◽  
Author(s):  
Alexander Lachmann ◽  
Federico M. Giorgi ◽  
Gonzalo Lopez ◽  
Andrea Califano
Keyword(s):  
Mutual Information ◽  
Reverse Engineering ◽  
Gene Network ◽  
Adaptive Partitioning

scholarly journals Reverse Engineering the Gap Gene Network of Drosophila melanogaster

2006 ◽  
Vol 2 (5) ◽  
pp. e51 ◽  
Author(s):  
Theodore J Perkins ◽  
Johannes Jaeger ◽  
John Reinitz ◽  
Leon Glass
Keyword(s):  
Drosophila Melanogaster ◽  
Reverse Engineering ◽  
Gene Network ◽  
Gap Gene

scholarly journals Accelerated parallel algorithm for gene network reverse engineering

2017 ◽  
Vol 11 (S4) ◽  
Author(s):  
Jing He ◽  
Zhou Zhou ◽  
Michael Reed ◽  
Andrea Califano
Keyword(s):  
Reverse Engineering ◽  
Parallel Algorithm ◽  
Gene Network
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