scholarly journals Complete Mitochondrial Genome Sequence of the Gulf Coast Tick (Amblyomma maculatum)

2021 ◽  
Vol 10 (38) ◽  
Author(s):  
Amanda E. Brenner ◽  
Rahul Raghavan
Keyword(s):  
Mitochondrial Genome ◽  
Genome Sequence ◽  
Gulf Coast ◽  
Complete Mitochondrial Genome ◽  
Rrna Genes ◽  
Gene Arrangement ◽  
Trna Genes ◽  
Amblyomma Maculatum ◽  
Mitochondrial Genome Sequence ◽  
Content Type

The complete circularized mitochondrial genome sequence of Amblyomma maculatum is 14,803 bp long. It encodes 13 protein coding genes, 2 rRNA genes, 22 tRNA genes, 2 tick box motifs, and 2 control regions. The gene arrangement and content are consistent with those of previously reported Metastriata tick mitochondrial genomes.

scholarly journals Complete Mitochondrial Genome Sequence of Bighorn Sheep

2018 ◽  
Vol 6 (23) ◽  
Author(s):  
Kimberly M. Davenport ◽  
Mingrui Duan ◽  
Samuel S. Hunter ◽  
Daniel D. New ◽  
Matthew W. Fagnan ◽  
...  
Keyword(s):  
Mitochondrial Genome ◽  
Genome Sequence ◽  
Complete Mitochondrial Genome ◽  
Bighorn Sheep ◽  
The United States ◽  
Rrna Genes ◽  
Trna Genes ◽  
Mitochondrial Genome Sequence ◽  
Content Type ◽  
Complete Mitochondrial Genome Sequence

ABSTRACT We report here the complete mitochondrial genome sequence of a Rocky Mountain bighorn sheep (Ovis canadensis) in the United States. The circular genome has a size of 16,466 bp and contains 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes.

scholarly journals Complete Mitochondrial Genome Sequence of the Magpie-Lark (Grallina cyanoleuca)

2021 ◽  
Vol 10 (24) ◽  
Author(s):  
Subir Sarker ◽  
Babu Kanti Nath ◽  
Saranika Talukder ◽  
Shane R. Raidal
Keyword(s):  
Mitochondrial Genome ◽  
Genome Sequence ◽  
Complete Mitochondrial Genome ◽  
Passerine Bird ◽  
Rrna Genes ◽  
Trna Genes ◽  
Protein Coding ◽  
Mitochondrial Genome Sequence ◽  
Content Type ◽  
Complete Mitochondrial Genome Sequence

Here, we report the complete mitochondrial genome sequence of an Australian passerine bird, magpie-lark ( Grallina cyanoleuca ). The circular genome has a size of 16,933 bp and contains 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes. This study provides a reference mitochondrial genome of magpie-lark for further molecular studies.

scholarly journals Mitochondrial Genome Sequence of the Land Snail Oreohelix idahoensis

2019 ◽  
Vol 8 (33) ◽  
Author(s):  
T. Mason Linscott ◽  
Christine E. Parent
Keyword(s):  
Mitochondrial Genome ◽  
Pacific Northwest ◽  
Genome Sequence ◽  
Complete Mitochondrial Genome ◽  
The United States ◽  
Land Snail ◽  
Rrna Genes ◽  
Trna Genes ◽  
Mitochondrial Genome Sequence ◽  
Content Type

We announce the complete mitochondrial genome sequence of Oreohelix idahoensis, a threatened land snail endemic to the Pacific Northwest of the United States. The circular genome is 14.2 kb and contains 13 protein-coding genes, 2 rRNA genes, and 21 tRNA genes.

scholarly journals Complete Mitochondrial Genome Sequence of Aethina tumida (Coleoptera: Nitidulidae), a Beekeeping Pest

2017 ◽  
Vol 5 (44) ◽  
Author(s):  
Véronique Duquesne ◽  
Aurélie Delcont ◽  
Anthéa Huleux ◽  
Véronique Beven ◽  
Fabrice Touzain ◽  
...  
Keyword(s):  
Mitochondrial Genome ◽  
Genome Sequence ◽  
Complete Mitochondrial Genome ◽  
Aethina Tumida ◽  
Rrna Genes ◽  
Protein Coding ◽  
Mitochondrial Genome Sequence ◽  
Complete Mitochondrial Genome Sequence ◽  
Protein Coding Genes

ABSTRACT We report here the full mitochondrial genome sequence of Aethina tumida, a Nitidulidae species beetle, that is a pest of bee hives. The obtained sequence is 16,576 bp in length and contains 13 protein-coding genes, 2 rRNA genes, and 22 tRNAs.

scholarly journals Mitochondrial Genome Sequence of the Galápagos Endemic Land Snail Naesiotus nux

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Samuel S. Hunter ◽  
Matthew L. Settles ◽  
Daniel D. New ◽  
Christine E. Parent ◽  
Alida T. Gerritsen
Keyword(s):  
Mitochondrial Genome ◽  
Genome Sequence ◽  
Land Snail ◽  
Rrna Genes ◽  
Snail Species ◽  
Trna Genes ◽  
Protein Coding ◽  
Mitochondrial Genome Sequence ◽  
Protein Coding Genes ◽  
Circular Genome

We report herein the draft mitochondrial genome sequence of Naesiotus nux , a Galápagos endemic land snail species of the genus Naesiotus . The circular genome is 15 kb and encodes 13 protein-coding genes, 2 rRNA genes, and 21 tRNA genes.

The complete mitochondrial genome of a tessaratomid bug, Eusthenes cupreus (Hemiptera: Heteroptera: Pentatomomorpha: Tessaratomidae)

Zootaxa ◽  
2013 ◽  
Vol 3620 (2) ◽  
pp. 260-272 ◽  
Author(s):  
WEN SONG ◽  
HU LI ◽  
FAN SONG ◽  
LI LIU ◽  
PEI WANG ◽  
...  
Keyword(s):  
Mitochondrial Genome ◽  
Control Region ◽  
Complete Mitochondrial Genome ◽  
Repetitive Sequences ◽  
Rrna Genes ◽  
Gene Arrangement ◽  
Trna Genes ◽  
Protein Coding ◽  
Simple Loop ◽  
Complete Mitogenome

The 16, 299 bp long mitochondrial genome (mitogenome) of a tessaratomid bug, Eusthenes cupreus (Westwood), is reported and analyzed. The mitogenome represents the first sequenced complete mitogenome of the heteropteran family Tessaratomidae. The mitogenome of E. cuopreus is a typical circular DNA molecule with a total AT content of 74.1%, and contains 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and a control region. The gene arrangement is identical with the most common type in insects. Most PCGs start with the typical ATN codon, except that the initiation codon for COI is TTG. All tRNAs possess the typical clover-leaf structure, except tRNASer (AGN), in which the dihydrouridine (DHU) arm forms a simple loop. Six domains with 45 helices and three domains with 27 helices are predicted in the secondary structures of rrnL and rrnS, respectively. The control region is located between rrnS and tRNAIle, including some short microsatellite repeat sequences. In addition, three different repetitive sequences are found in the control region and the tRNAIle-tRNAGln-tRNAMet-ND2 gene cluster. One of the unusual features of this mitogenome is the presence of one tRNAGln-like sequence in the control region. This extra tRNAGln-like sequence is 73 bp long, and the anticodon arm is identical to that of the regular tRNAGln.

scholarly journals Variants in the Mitochondrial Genome Sequence of Rhyzopertha dominica (Fabricius) (Coleoptera: Bostrycidae)

Insects ◽  
2021 ◽  
Vol 12 (5) ◽  
pp. 387
Author(s):  
Lindsey C. Perkin ◽  
Timothy P. L. Smith ◽  
Brenda Oppert
Keyword(s):  
Mitochondrial Genome ◽  
Genome Sequence ◽  
Sequence Data ◽  
Laboratory Strain ◽  
Rhyzopertha Dominica ◽  
Whole Genome Sequence ◽  
Rrna Genes ◽  
Long Control Region ◽  
Trna Genes ◽  
Mitochondrial Genome Sequence

The lesser grain borer, Rhyzopertha dominica, is a coleopteran pest of stored grains and is mainly controlled by phosphine fumigation, but the increase in phosphine-resistant populations threatens efficacy. Some phosphine-resistant insects have reduced respiration, and thus studying the mitochondrial genome may provide additional information regarding resistance. Genomic DNA from an inbred laboratory strain of R. dominica was extracted and sequenced with both short (Illumina) and long (Pacific Biosciences) read technologies for whole genome sequence assembly and annotation. Short read sequences were assembled and annotated by open software to identify mitochondrial sequences, and the assembled sequence was manually annotated and verified by long read sequences. The mitochondrial genome sequence for R. dominica had a total length of 15,724 bp and encoded 22 trna genes, 2 rRNA genes, 13 protein coding genes (7 nad subunits, 3 cox, 2 atp, and 1 cytB), flanked by a long control region. We compared our predicted mitochondrial genome to that of another from a R. dominica strain from Jingziguan (China). While there was mostly agreement between the two assemblies, key differences will be further examined to determine if mutations in populations are related to insecticide control pressure, mainly that of phosphine. Differences in sequence data, assembly, and annotation also may result in different genome interpretations.

scholarly journals Complete Mitochondrial Genome Sequence of Bos Frontalis (Gayal) of Bangladesh

2021 ◽  
Author(s):  
Gautam Kumar Deb ◽  
Razia Khatun ◽  
Shakh Mohammed Jahangir Hossain ◽  
Shamsur Rahaman ◽  
Md. Anamul Bahar Bhuiyan ◽  
...  
Keyword(s):  
Mitochondrial Genome ◽  
Control Region ◽  
Related Species ◽  
Complete Mitochondrial Genome ◽  
Rrna Genes ◽  
Gene Arrangement ◽  
Trna Genes ◽  
Closely Related Species ◽  
Protein Coding ◽  
Protein Coding Genes

Abstract Background: Complete mitochondrial genome of Bos frontalis will aid in the investigation of evolutionary links between closely related species. Bos frontalis mitogenome contains 37 genes and a control region. We discover the first complete mitogenome of Bos frontalis found in Bangladesh which was obtained from whole-genome sequencing of Bos frontalis.Results: Bos frontalis mitogenome is 16,347 bp long, with an AT-based nucleotide composition (60.21%). It contains 37 genes, including 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and a control region (D-loop). This circular genome starts with ND6(negative strand) and ends at ND5(positive strand). Protein coding genes lost 24 bases and tRNA genes gained 27 bases compared to closely related species. Phylogenetic analysis of the mitochondrial genome of 26 closely related species from 8 congeneric species was conducted by the maximum likelihood method with 1000 bootstrap iteration.Conclusion: Our studied Bos frontalis mitochondrial genome has a similar gene arrangement compared with other Bos species. It has almost the same amount of AT and GC content, but notably the ND6 gene lacks AT skew and GC skew than that of the other two comparing species. PCG’s loss in size might be a continuous process of evolution. The mitochondrial genome is regarded as a critical tool for species identification and monitoring populations of conservation concern.

The complete mitochondrial genome of the storage mite pest Tyrophagus fanetzhangorum (Acari: Acaridae)

2020 ◽  
Vol 25 (9) ◽  
pp. 1693-1701
Author(s):  
Xuan Su ◽  
Yu Fang ◽  
Jiao-Yang Xu ◽  
Wei-Xi Fang ◽  
Xue-Bing Zhan ◽  
...  
Keyword(s):  
Mitochondrial Genome ◽  
Ribosomal Rna ◽  
Common Ancestor ◽  
Phylogenetic Analyses ◽  
Complete Mitochondrial Genome ◽  
Rrna Genes ◽  
Gene Arrangement ◽  
Trna Genes ◽  
Storage Mite ◽  
Astigmatid Mites

Mitochondrial (mt) genomes of astigmatid mites typically contain 37 genes for 13 proteins, two ribosomal RNA (rRNA) genes and 22 transfer RNA (tRNA) genes. However, two Tyrophagus mites (Tyrophagus putrescentiae and T. longior) were reported as having lost three tRNAs in their mt genomes. In this study, we sequenced the complete mitochondrial genome of Tyrophagus fanetzhangorum (14,257 bp) and found typical set of mt tRNA genes (22 tRNAs). The gene arrangement of T. fanetzhangorum is consistent with the pattern of possible common ancestor of astigmatid mites. Phylogenetic analyses were conducted using Maximum likelihood (ML) and Bayesian inference (BI) methods. Phylogenetic analysis shows that T. fanetzhangorum is more closely related to T. putrescentiae than to T. longior within the genus Tyrophagus.

scholarly journals Complete Mitochondrial Genome Sequence of the Pezizomycete Pyronema confluens

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Minou Nowrousian
Keyword(s):  
Mitochondrial Genome ◽  
Genome Sequence ◽  
Complete Mitochondrial Genome ◽  
Homing Endonuclease ◽  
Mitochondrial Proteins ◽  
Rrna Genes ◽  
Trna Genes ◽  
Protein Coding ◽  
Complete Mitochondrial Genome Sequence ◽  
Protein Coding Genes

The complete mitochondrial genome of the ascomycete Pyronema confluens has been sequenced. The circular genome has a size of 191 kb and contains 48 protein-coding genes, 26 tRNA genes, and two rRNA genes. Of the protein-coding genes, 14 encode conserved mitochondrial proteins, and 31 encode predicted homing endonuclease genes.

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