scholarly journals Whole-Genome Sequence Analysis of Multidrug-Resistant Enterobacter hormaechei Isolated from Imported Retail Shrimp

2020 ◽  
Vol 9 (50) ◽  
Author(s):  
Nagaraju Indugu ◽  
Laxmi Sharma ◽  
Charlene R. Jackson ◽  
Prashant Singh
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Multidrug Resistant ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Genome Sequence Analysis ◽  
Content Type ◽  
Shrimp Sample ◽  
Enterobacter Hormaechei

ABSTRACT Here, we announce the draft genome sequence of Enterobacter hormaechei 2B-MC1, isolated from a shrimp sample collected from a farmer’s market in Atlanta, Georgia. The assembled genome sequence observed was 4,661,561 bp long with a G+C content of 55.3%. The isolate harbored sul1, sul2, qnrA1, oqxB, dfrA23, blaACT, floR, fosA, tet(A), aph(6)-Id, and aph(3″)-Ib antibiotic resistance genes.

scholarly journals Whole-Genome Sequence of Acinetobacter baumannii Strain NUBRI-A, Isolated from a Hospitalized Patient in Khartoum, Sudan

2019 ◽  
Vol 8 (32) ◽  
Author(s):  
Sofia B. Mohamed ◽  
Mohamed Hassan ◽  
Abdalla Munir ◽  
Sumaya Kambal ◽  
Nusiba I. Abdalla ◽  
...  
Keyword(s):  
Acinetobacter Baumannii ◽  
Genome Sequence ◽  
Genomic Sequence ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Hospital Patient ◽  
Content Type

Acinetobacter baumannii has emerged as an important pathogen leading to multiple nosocomial outbreaks. Here, we describe the genomic sequence of a multidrug-resistant Acinetobacter baumannii sequence type 164 (ST164) isolate from a hospital patient in Sudan. To our knowledge, this is the first reported draft genome of an A. baumannii strain isolated from Sudan.

scholarly journals Draft Genome Sequence of Acholeplasma laidlawii Isolated from the Conjunctiva of a Heifer with Infectious Bovine Keratoconjunctivitis

2021 ◽  
Vol 10 (4) ◽  
Author(s):  
Gloria Gioia ◽  
Maria F. Addis ◽  
Laura B. Goodman ◽  
Patrick K. Mitchell ◽  
Belinda Thompson ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Infectious Bovine Keratoconjunctivitis ◽  
Acholeplasma Laidlawii

ABSTRACT Acholeplasma laidlawii can be isolated from cattle environments and different body sites of bovines. It is still under evaluation if A. laidlawii acts as a primary pathogen. Here, we present the whole-genome sequence of A. laidlawii isolated from the conjunctiva of a heifer with infectious bovine keratoconjunctivitis.

scholarly journals Draft Genome Sequence of the Green Alga Scenedesmus acuminatus SAG 38.81

2020 ◽  
Vol 9 (24) ◽  
Author(s):  
Yekaterina Astafyeva ◽  
Malik Alawi ◽  
Daniela Indenbirken ◽  
Dominik Danso ◽  
Adam Grundhoff ◽  
...  
Keyword(s):  
Fatty Acids ◽  
Genome Sequence ◽  
Draft Genome ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Green Microalga ◽  
Scenedesmus Acuminatus ◽  
Valuable Compounds ◽  
Β Carotene

ABSTRACT Scenedesmus acuminatus, also known as Tetradesmus acuminatus, is a promising green microalga for sustainable production of microalga products, including valuable compounds such as astaxanthin, β-carotene, and lutein, polysaccharides such as β-glucan, and polyunsaturated fatty acids. Here, we report the draft whole-genome sequence of Scenedesmus acuminatus SAG 38.81.

scholarly journals Draft Genome Sequence of Streptococcus suis S10, a Virulent Strain Used in Experimental Pig Infections

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Rogier A. Gaiser ◽  
Aldert L. Zomer ◽  
Jerry M. Wells ◽  
Peter van Baarlen
Keyword(s):  
Infectious Diseases ◽  
Genome Sequence ◽  
Virulent Strain ◽  
Draft Genome ◽  
Streptococcus Suis ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Highly Virulent

Here, we report the draft whole-genome sequence of Streptococcus suis strain S10, isolated from the tonsils of a healthy pig. S. suis S10 belongs to the highly virulent serotype 2, which includes isolates that cause infectious diseases, including meningitis, in pigs and human.

scholarly journals Whole-Genome Sequence of Pseudomonas aeruginosa Strain 4014, Isolated from Soil in France

2018 ◽  
Vol 7 (10) ◽  
Author(s):  
Julien Crovadore ◽  
Damien Grizard ◽  
Romain Chablais ◽  
Bastien Cochard ◽  
Philippe Blanc ◽  
...  
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Human Pathogen ◽  
Content Type ◽  
Multiple Antibiotics

We report here the draft genome sequence of strain 4014 of Pseudomonas aeruginosa, a common human pathogen, isolated from soil in France. This sequence predicts resistance to multiple antibiotics, including vancomycin.

scholarly journals Insights from the Genome Sequence of Quorum-Quenching Staphylococcus sp. Strain AL1, Isolated from Traditional Chinese Soy Sauce Brine Fermentation

2012 ◽  
Vol 194 (23) ◽  
pp. 6611-6612 ◽  
Author(s):  
Teik-Min Chong ◽  
Hun-Jiat Tung ◽  
Wai-Fong Yin ◽  
Kok-Gan Chan
Keyword(s):  
Quorum Sensing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Quorum Quenching ◽  
Soy Sauce ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Homoserine Lactones ◽  
Acyl Homoserine Lactones

ABSTRACTWe report the draft genome sequence ofStaphylococcussp. strain AL1, which degrades quorum-sensing molecules (namely,N-acyl homoserine lactones). To the best of our knowledge, this is the first documentation that reports the whole genome sequence and quorum-quenching activity ofStaphylococcussp. strain AL1.

scholarly journals Whole-Genome Sequence of a Megasphaera elsdenii Strain Isolated from the Gut of a Healthy Indian Adult Subject

2017 ◽  
Vol 5 (42) ◽  
Author(s):  
Satyabrata Bag ◽  
Tarini Shankar Ghosh ◽  
Bhabatosh Das
Keyword(s):  
Stool Sample ◽  
Genome Sequence ◽  
Draft Genome ◽  
Adult Subject ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Indian Subject ◽  
Content Type ◽  
Megasphaera Elsdenii

ABSTRACT Megasphaera elsdenii has been previously reported in the gut of ruminating animals. Its role as an animal probiotic is being investigated, specifically from the perspective of enhancing animal productivity. Herein, we report the draft genome sequence of M. elsdenii strain indica isolated from the stool sample of a healthy Indian subject.

scholarly journals Draft Genome Sequence of Invasive Salmonella enterica Serovar Cannstatt Harboring mcr-1.1, Isolated from a Fatal Sepsis Case

2021 ◽  
Vol 10 (8) ◽  
Author(s):  
Wantana Paveenkittiporn ◽  
Watcharaporn Kamjumphol ◽  
Anusak Kerdsin
Keyword(s):  
Genome Sequence ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
Genomic Analysis ◽  
Multidrug Resistant ◽  
Sequence Type ◽  
Whole Genome Sequence ◽  
Content Type ◽  
Fatal Sepsis ◽  
M 14

ABSTRACT Here, we report the whole-genome sequence of multidrug-resistant Salmonella enterica serovar Cannstatt harboring mcr-1.1, isolated from a fatal sepsis case. Genomic analysis revealed that the isolate was sequence type 2390 carrying mcr-1.1, blaCTX-M-14, aac(3)IId, aac(6′)Iaa, floR, qnrS1, sul2, tetA, and tetM. Three Inc plasmids were observed, including the IncX4 plasmid containing mcr-1.1.

scholarly journals Whole genome sequence analysis of Shigella from Malawi identifies fluoroquinolone resistance

2021 ◽  
Vol 7 (5) ◽  
Author(s):  
George E. Stenhouse ◽  
Khuzwayo C. Jere ◽  
Chikondi Peno ◽  
Rebecca J. Bengtsson ◽  
End Chinyama ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Antimicrobial Resistance ◽  
Genome Sequence ◽  
Whole Genome Sequence ◽  
Fluoroquinolone Resistance ◽  
Whole Genome ◽  
Genome Sequence Analysis ◽  
Content Type ◽  
Link Type ◽  
Global Priority

Increasing antimicrobial resistance and limited alternative treatments have led to fluoroquinolone-resistant Shigella strain inclusion on the WHO global priority pathogens list. In this study we characterized multiple Shigella isolates from Malawi with whole genome sequence analysis, identifying the acquirable fluoroquinolone resistance determinant qnrS1.

scholarly journals Draft Genome Sequence of Lactiplantibacillus pentosus AWA1501, Isolated from Awa-bancha

2021 ◽  
Vol 10 (30) ◽  
Author(s):  
F. Ito ◽  
R. Niwa ◽  
Y. Syaputri ◽  
Y. Ikagawa ◽  
T. Mizuno ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Dna Sequences ◽  
Fermentation Process ◽  
Anaerobic Fermentation ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type

Lactiplantibacillus pentosus AWA1501 was isolated from the traditional Japanese tea Awa-bancha. Previous studies have reported that this species becomes predominant after the anaerobic fermentation process. In this study, we report the whole-genome sequence of this strain. The draft genome sequence comprises 3,714,221 nucleotides and 3,374 coding DNA sequences, with an average G+C content of 46.02%.

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