A SOFTWARE TOOL TO MODEL GENETIC REGULATORY NETWORKS: APPLICATIONS TO SEGMENTAL PATTERNING IN DROSOPHILA

BIOMAT 2005 ◽  
2006 ◽  
Author(s):  
FILIPA ALVES ◽  
RUI DILÃO
2005 ◽  
Vol 03 (02) ◽  
pp. 415-436 ◽  
Author(s):  
STEPHEN RAMSEY ◽  
DAVID ORRELL ◽  
HAMID BOLOURI

We describe Dizzy, a software tool for stochastically and deterministically modeling the spatially homogeneous kinetics of integrated large-scale genetic, metabolic, and signaling networks. Notable features include a modular simulation framework, reusable modeling elements, complex kinetic rate laws, multi-step reaction processes, steady-state noise estimation, and spatial compartmentalization.


2019 ◽  
Vol 356 (5) ◽  
pp. 2847-2869 ◽  
Author(s):  
Dandan Yue ◽  
Zhi-Hong Guan ◽  
Juan Li ◽  
Feng Liu ◽  
Jiang-Wen Xiao ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document