scholarly journals Detailed Photoisomerization Dynamics of a Green Fluorescent Protein Chromophore Based Molecular Switch

2014 ◽  
Vol 2014 ◽  
pp. 1-11 ◽  
Author(s):  
Chen-Wei Jiang ◽  
Ai-Ping Fang ◽  
Di Zhao ◽  
Hong-Rong Li ◽  
Rui-Hua Xie ◽  
...  

With density-functional-based nonadiabatic molecular dynamics simulations,trans-to-cisandcis-to-transphotoisomerizations of a green fluorescent protein chromophore based molecule 4-benzylidene-2-methyloxazol-5(4H)-one (BMH) induced by the excitation to itsS1excited state were performed. We find a quantum yield of 32% for thetrans-to-cisphotoisomerization of BMH and a quantum yield of 33% for itscis-to-transphotoisomerization. For those simulations that did producetrans-to-cisisomerization, the averageS1excited state lifetime oftrans-BMH is about 1460 fs, which is much shorter than that ofcis-BMH (3100 fs) in those simulations that did producecis-to-transisomerization. For both photoisomerization processes, rotation around the central C2=C3 bond is the dominant reaction mechanism. Deexcitation occurs at an avoided crossing near theS1/S0conical intersection, which is near the midpoint of the rotation.

1998 ◽  
Vol 237 (1-2) ◽  
pp. 183-193 ◽  
Author(s):  
Andreas D Kummer ◽  
Christian Kompa ◽  
Harald Lossau ◽  
Florian Pöllinger-Dammer ◽  
Maria E Michel-Beyerle ◽  
...  

RSC Advances ◽  
2019 ◽  
Vol 9 (66) ◽  
pp. 38730-38734 ◽  
Author(s):  
Snizhana O. Zaitseva ◽  
Dilara A. Farkhutdinova ◽  
Nadezhda S. Baleeva ◽  
Alexander Yu. Smirnov ◽  
Marina B. Zagudaylova ◽  
...  

We design a new class of excited-state locked GFP chromophores which intrinsically exhibit a very large Stokes shift.


2005 ◽  
Vol 127 (32) ◽  
pp. 11214-11215 ◽  
Author(s):  
Anwar Usman ◽  
Omar F. Mohammed ◽  
Erik T. J. Nibbering ◽  
Jian Dong ◽  
Kyril M. Solntsev ◽  
...  

2011 ◽  
Vol 115 (47) ◽  
pp. 13733-13742 ◽  
Author(s):  
Shahnawaz Rafiq ◽  
Basanta Kumar Rajbongshi ◽  
Nisanth N. Nair ◽  
Pratik Sen ◽  
Gurunath Ramanathan

2008 ◽  
Vol 112 (10) ◽  
pp. 2761-2763 ◽  
Author(s):  
Haruko Hosoi ◽  
Shoichi Yamaguchi ◽  
Hideaki Mizuno ◽  
Atsushi Miyawaki ◽  
Tahei Tahara

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