Faculty Opinions recommendation of Post-transcriptional Regulation of De Novo Lipogenesis by mTORC1-S6K1-SRPK2 Signaling.

Author(s):  
William Mair ◽  
Sneha Dutta
Cell ◽  
2017 ◽  
Vol 171 (7) ◽  
pp. 1545-1558.e18 ◽  
Author(s):  
Gina Lee ◽  
Yuxiang Zheng ◽  
Sungyun Cho ◽  
Cholsoon Jang ◽  
Christina England ◽  
...  

Circulation ◽  
2020 ◽  
Vol 142 (Suppl_3) ◽  
Author(s):  
Chen Gao ◽  
Zhaojun xiong ◽  
Jianfang Liu ◽  
Menglong Wang ◽  
Yun-Hua Hsiao ◽  
...  

Post-transcriptional regulation plays a key role in transcriptome reprogramming during cardiac development and pathogenesis. In previous study, we have identified that loss of RBFox1 is a molecular hallmark associated with cardiac pathological hypertrophy and heart failure. We further demonstrate that RBFox1 regulates cardiac gene expression and function at post-transcriptional level through targeted RNA splicing in nuclei. However, RBFox1 gene also generates a cytosolic isoform RBFox1c, suggesting that it might also regulate other aspects of post-transcriptional regulation in heart. We detected that RBFox1c mRNA constituted 40% of total RBFox1 level in normal adult heart but repressed in diseased heart. In RBFox1-cKO mice, enhanced cardiac fibrosis was associated with loss of cardiac function following MI or TAC. Restoration of RBFox1c expression (RBFox1c-TG) significantly reduced cardiac fibrosis. RNA sequencing in RBFox1c expressing cardiomyocytes showed that RBFox1c specifically suppressed the expression of pro-inflammatory genes. The pro-inflammatory genes were induced in the RBFox1 deficient hearts but suppressed upon cardiomyocyte specific RBFox1c expression. In vitro, RBFox1c expression in NRVM suppressed PE induced proinflammatory genes and significantly blocked the effects of the conditioned media on fibroblast proliferation. De novo motif discovery identified a significant enrichment of the conserved RBFox1 binding motif in the 3’UTRs of the RBFox1c dependent genes. RNA-CLIP analysis further demonstrated a direct binding of RBFox1c to the pro-inflammatory gene 3’UTR. We characterized the interactome of RBFox1c and found RBFox1c specifically interacted with a component of the RNA non-sense mediated decay machinery-Upf1. RBFox1c interaction with Upf1 in cardiomyocytes was diminished upon hypertrophic stress. By inactivation of Upf1 via siRNA, we demonstrated that RBFox1c mediated repression of proinflammatory genes was Upf1 dependent. Finally, by temporally induced expression of RBFox1c in post-TAC heart, we provided proof-of-concept evidence that targeted expression of RBFox1c was sufficient to ameliorate pathological remodeling and progression of heart failure as a potential gene-based therapy.


2006 ◽  
Vol 18 (2) ◽  
pp. 229 ◽  
Author(s):  
A. Bettegowda ◽  
O. V. Patel ◽  
J. Yao ◽  
J. J. Ireland ◽  
G. W. Smith

Oocyte-expressed genes play key roles in folliculogenesis and early embryonic development. The function of JY-1, a novel gene specifically expressed in bovine oocytes and early embryos, is unknown. We previously reported the expression pattern of JY-1 mRNA during meiotic maturation and early embryogenesis. The objective of this study was to elucidate the post-transcriptional regulation of JY-1 mRNA during oocyte maturation and early embryogenesis. For investigation of changes in length of JY-1 transcripts during the oocyte-to-embryo transition, total RNA isolated from germinal vesicle (GV) oocytes, metaphase II (MII) oocytes, and pronucleus (PN) stage embryos (300 oocytes/embryos per time point) was subjected to Northern blot analysis. Three major JY-1 transcripts of different length (approximately 1.8 kb, 1.2 kb, and 700 bp) were detected in GV oocytes. The size of all transcripts was decreased at MII, and PN stages by approximately 100 to 200 bp. The intermediate sized transcript was predominant at GV, MII and PN stages. Based on these initial qualitative results focused solely on changes in transcript size, we then conducted more detailed quantitative studies (using real-time PCR) focused on characterization of temporal changes in abundance of polyadenylated versus total JY-1 transcripts during early development. Total RNA samples isolated from GV and MII oocytes and from embryos at PN, 2-cell, 4-cell, 8-cell, 16-cell, morula, and blastocyst stage (n = 5 pools of 10 oocytes/embryos per time point) were divided into two equal aliquots. One aliquot was reverse transcribed into cDNA with oligo dT primers for quantification of polyadenylated transcripts and the other aliquot was transcribed with random hexamers (RH) for quantification of total transcripts. Amounts of polyadenylated JY-1 mRNA decreased during meiotic maturation (P < 0.0001), were increased (P < 0.05) at the PN and 4-cell stages relative to the MII stage, and then decreased to nearly undetectable levels after the 16-cell stage of embryo development. In contrast, amount of total JY-1 transcripts gradually decreased from PN through 16-cell stages to nearly undetectable levels thereafter. To confirm that the up-regulation of polyadenylated JY-1 mRNA in early developing embryos was not due to de novo transcription, alpha-amanitin was used to block the RNA polymerase II enzyme during the window of the first (24-13 h post-fertilization) or the second (33-14 h post-fertilization) embryonic cell cycle, and embryos at the 2-cell and 4-cell stages were collected (n = 4 pools of 10 embryos per time point). No significant changes were observed in abundance of JY-1 mRNA in control versus alpha-amanitin treated embryos. We conclude that JY-1 transcripts decrease in length during meiotic maturation and that polyadenylated JY-1 mRNAs detected in early developing embryos are oocyte-derived and not due to de novo transcription in early embryos. This work was supported by the Rackham Foundation and the Michigan Agricultural Experiment Station.


2014 ◽  
Vol 52 (08) ◽  
Author(s):  
T Tolstik ◽  
C Marquardt ◽  
C Matthäus ◽  
C Beleites ◽  
C Krafft ◽  
...  

Diabetes ◽  
2019 ◽  
Vol 68 (Supplement 1) ◽  
pp. 43-OR
Author(s):  
DINA MOSTAFA ◽  
AKINORI TAKAHASHI ◽  
TADASHI YAMAMOTO

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