Structural Identification of Metalloproteomes in Marine Diatoms, an Efficient Algae Model in Toxic Metals Bioremediation

The biosorption of pollutants using microbial organisms has received growing interest in the last decades. Diatoms, the most dominant group of phytoplankton in oceans, are (i) pollution tolerant species, (ii) excellent biological indicators of water quality, and (iii) efficient models in assimilation and detoxification of toxic metal ions. Published research articles connecting proteomics with the capacity of diatoms for toxic metal removal are very limited. In this work, we employed a structural based systematic approach to predict and analyze the metalloproteome of six species of marine diatoms: Thalassiosira pseudonana, Phaeodactylum tricornutum, Fragilariopsis cylindrus, Thalassiosira oceanica, Fistulifera solaris, and Pseudo-nitzschia multistriata. The results indicate that the metalloproteome constitutes a significant proportion (~13%) of the total diatom proteome for all species investigated, and the proteins binding non-essential metals (Cd, Hg, Pb, Cr, As, and Ba) are significantly more than those identified for essential metals (Zn, Cu, Fe, Ca, Mg, Mn, Co, and Ni). These findings are most likely related to the well-known toxic metal tolerance of diatoms. In this study, metalloproteomes that may be involved in metabolic processes and in the mechanisms of bioaccumulation and detoxification of toxic metals of diatoms after exposure to toxic metals were identified and described.

Toxic metal concentrations and Cu–Zn–Pb isotopic compositions in tires

Background Particles from non-exhaust emissions derived from traffic activities are a dominant cause of toxic metal pollution in urban environments. Recently, studies applying multiple isotope values using the Iso-source and positive matrix factorization (PMF) models have begun to be used as useful tools to evaluate the contribution of each pollution source in urban environments. However, data on the metal concentrations and isotopic compositions of each potential source are lacking. Therefore, this study presents data on toxic metals and Cu, Zn, and Pb isotopic compositions in tires, which are one of the important non-exhaust emission sources. Findings Among the toxic metals, Zn had the highest concentration in all tire samples, and the mean concentrations were in the order of Zn > Cu > Pb > Sn > Sb > Ni > Cr > As > Cd. Ni, Zn, Sn, and Sb had higher concentrations in domestic tires (South Korea), and the Cu, Cd, and Pb concentrations were relatively higher in imported tires. The mean values of δ65CuAE647, δ66ZnIRMM3702, and 206Pb/207Pb ranged from − 1.04 to − 0.22‰, − 0.09 to − 0.03‰, and 1.1242 to 1.1747, respectively. The concentrations and isotopic compositions of Cu and Pb in the tires showed large differences depending on the product and manufacturer. However, the differences in Zn concentration and δ66ZnIRMM3702 values were very small compared with those of Cu and Pb. The relationships of the Zn concentration and isotopic composition showed that domestic tires are clearly distinguishable from imported tires. Bi-plots of Cu, Zn, and Pb isotopic compositions indicated that tires can be clearly discriminated from natural-origin and other non-exhaust traffic emission sources. Conclusions The multi-isotope signatures of Cu, Zn, and Pb exhibited different isotopic values for other non-exhaust traffic emission sources than for tires, and application of the multi-isotope technique may be a powerful method for distinguishing and managing non-exhaust sources of metal contamination in urban environments.