New Insights on the Diurnal Mechanism of Calcification in the Stony Coral, Stylophora pistillata

Scleractinian corals are evolutionary-successful calcifying marine organisms, which utilize an endo-symbiotic relationship with photosynthetic dinoflagellate algae that supply energy products to their coral hosts. This energy further supports a higher calcification rate during the day in a process known as light enhanced calcification. Although this process has been studied for decades, the mechanisms behind it are still unknown. However, photosynthesis and respiration also cause daily fluctuations in oxygen and pH levels, resulting in the coral facing highly variable conditions. Here we correlated gene expression patterns with the physiological differences along the diel cycle to provide new insights on the daily dynamic processes, including circadian rhythm, calcification, symbiosis, cellular arrangement, metabolism, and energy budget. During daytime, when solar radiation levels are highest, we observed increased calcification rate combined with an extensive up-regulation of genes associated with reactive oxygen species, redox, metabolism, ion transporters, skeletal organic matrix, and mineral formation. During the night, we observed a vast shift toward up-regulation of genes associated with cilia movement, tissue development, cellular movement, antioxidants, protein synthesis, and skeletal organic matrix formation. Our results suggest that light enhanced calcification is related to several processes that occur across the diel cycle; during nighttime, tissue might elevate away from the skeleton, extending the calcifying space area to enable the formation of a new organic framework template. During daytime, the combination of synthesis of acid-rich proteins and a greater flux of ions to the sites of calcification facilitate the conditions for extensive mineral growth.

Heat stress reduces the contribution of diazotrophs to coral holobiont nitrogen cycling

Efficient nutrient cycling in the coral-algal symbiosis requires constant but limited nitrogen availability. Coral-associated diazotrophs, i.e., prokaryotes capable of fixing dinitrogen, may thus support productivity in a stable coral-algal symbiosis but could contribute to its breakdown when overstimulated. However, the effects of environmental conditions on diazotroph communities and their interaction with other members of the coral holobiont remain poorly understood. Here we assessed the effects of heat stress on diazotroph diversity and their contribution to holobiont nutrient cycling in the reef-building coral Stylophora pistillata from the central Red Sea. In a stable symbiotic state, we found that nitrogen fixation by coral-associated diazotrophs constitutes a source of nitrogen to the algal symbionts. Heat stress caused an increase in nitrogen fixation concomitant with a change in diazotroph communities. Yet, this additional fixed nitrogen was not assimilated by the coral tissue or the algal symbionts. We conclude that although diazotrophs may support coral holobiont functioning under low nitrogen availability, altered nutrient cycling during heat stress abates the dependence of the coral host and its algal symbionts on diazotroph-derived nitrogen. Consequently, the role of nitrogen fixation in the coral holobiont is strongly dependent on its nutritional status and varies dynamically with environmental conditions.

Effects of Ocean Acidification on Resident and Active Microbial Communities of Stylophora pistillata

Ocean warming and ocean acidification (OA) are direct consequences of climate change and affect coral reefs worldwide. While the effect of ocean warming manifests itself in increased frequency and severity of coral bleaching, the effects of ocean acidification on corals are less clear. In particular, long-term effects of OA on the bacterial communities associated with corals are largely unknown. In this study, we investigated the effects of ocean acidification on the resident and active microbiome of long-term aquaria-maintained Stylophora pistillata colonies by assessing 16S rRNA gene diversity on the DNA (resident community) and RNA level (active community). Coral colony fragments of S. pistillata were kept in aquaria for 2 years at four different pCO2 levels ranging from current pH conditions to increased acidification scenarios (i.e., pH 7.2, 7.4, 7.8, and 8). We identified 154 bacterial families encompassing 2,047 taxa (OTUs) in the resident and 89 bacterial families including 1,659 OTUs in the active communities. Resident communities were dominated by members of Alteromonadaceae, Flavobacteriaceae, and Colwelliaceae, while active communities were dominated by families Cyclobacteriacea and Amoebophilaceae. Besides the overall differences between resident and active community composition, significant differences were seen between the control (pH 8) and the two lower pH treatments (7.2 and 7.4) in the active community, but only between pH 8 and 7.2 in the resident community. Our analyses revealed profound differences between the resident and active microbial communities, and we found that OA exerted stronger effects on the active community. Further, our results suggest that rDNA- and rRNA-based sequencing should be considered complementary tools to investigate the effects of environmental change on microbial assemblage structure and activity.

Spatial distribution of conspecific genotypes within chimeras of the branching coral Stylophora pistillata

Chimerism is a coalescence of conspecific genotypes. Although common in nature, fundamental knowledge, such as the spatial distribution of the genotypes within chimeras, is lacking. Hence, we investigated the spatial distribution of conspecific genotypes within the brooding coral Stylophora pistillata, a common species throughout the Indo-Pacific and Red Sea. From eight gravid colonies, we collected planula larvae that settled in aggregates, forming 2–3 partner chimeras. Coral chimeras grew in situ for up to 25 months. Nine chimeras (8 kin, 1 non-related genotypes) were sectioned into 7–17 fragments (6–26 polyps/fragment), and genotyped using eight microsatellite loci. The discrimination power of each microsatellite-locus was evaluated with 330 ‘artificial chimeras,’ made by mixing DNA from three different S. pistillata genotypes in pairwise combinations. In 68% of ‘artificial chimeras,’ the second genotype was detected if it constituted 5–30% of the chimera. Analyses of S. pistillata chimeras revealed that: (a) chimerism is a long-term state; (b) conspecifics were intermixed (not separate from one another); (c) disproportionate distribution of the conspecifics occurred; (d) cryptic chimerism (chimerism not detected via a given microsatellite) existed, alluding to the underestimation of chimerism in nature. Mixed chimerism may affect ecological/physiological outcomes for a chimera, especially in clonal organisms, and challenges the concept of individuality, affecting our understanding of the unit of selection.

Ocean Acidification: Comparative Impacts on the Photophysiology of a Temperate Symbiotic Sea Anemone and a Tropical Coral

<p>Ocean acidification has the potential to drastically alter the coral reef ecosystem by reducing the calcification rate of corals and other reef-builders, and hence a considerable amount of research is now focused on this issue. It also is conceivable that acidification may affect other physiological processes of corals. In particular, acidification may alter photosynthetic physiology and hence the productivity of the coraldinoflagellate symbiosis that is pivotal to the reef's survival and growth. However, very little is known about the impacts of acidification on the photophysiology of corals or, indeed, other invertebrate-algal symbioses. This gap in our knowledge was addressed here by measuring the impacts of acidification (pH 7.6 versus pH 8.1) on the photophysiology and health of the tropical coral Stylophora pistillata and its isolated dinoflagellate symbionts ('zooxanthellae'), and the temperate sea anemone Anthopleura aureoradiata. The comparative nature of this study allowed for any differences between tropical and temperate symbioses, and zooxanthellae in a symbiotic or free-living state, to be assessed. Corals, anemones and cultured zooxanthellae were maintained in flowthrough seawater systems, and treated either with non-acidified (control) seawater at pH 8.1, or seawater acidified with CO2 or HCl to pH 7.6. A variety of parameters, including zooxanthellar density, chlorophyll content, photosynthetic health (Yi), and the ratio of gross photosynthetic production to respiration (P:R) were measured via cell counts, spectrophotometry, respirometry and PAM fluorometry, at a series of time-points up to a maximum of 42 days. Acidification generated by the addition of CO2 had no discernible effect on Yi of either the corals or anemones. However, in the coral, chlorophyll content per zooxanthella cell increased by 25%, which was countered by a near-significant decline (22%) in the rate of gross photosynthesis per unit chlorophyll; as zooxanthellar density remained unchanged, this led to a constant P:R ratio. When acidified via CO2, the isolated zooxanthellae exhibited no impacts in recorded Yi or chlorophyll levels. The response of the anemone to acidification via CO2 was different to that observed in the coral, as the density of zooxanthellae increased, rather than the chlorophyll content per cell, leading to an increased rate of gross photosynthesis. However P:R again remained constant as the increased photosynthesis was matched by an increased rate of respiration. In contrast to the impacts of CO2, HCl adversely impacted the chlorophyll content per cell in both the isolated zooxanthellae and sea anemone, and Yi, gross photosynthesis per cell, and overall gross photosynthesis in the sea anemone; however, despite the decline in gross photosynthesis, P:R remained constant due to the concurrent decline in respiration. Unfortunately, the corals in the HCl experiment died due to technical issues. There are two plausible reasons for this difference between CO2 and HCl. Firstly, HCl may have caused intracellular acidosis which damaged chloroplast structure and photosynthetic function. Secondly, the increased levels of aqueous CO2 stimulated photosynthetic function and hence mitigated for the effects of lowered pH. In addition, evidence is presented for a pH threshold for A. aureoradiata of between pH 6 and pH 6.75 (acidified with HCl), at which point photosynthesis 'shuts-down'. This suggests that, even without the potentially beneficial effects from increased CO2 levels, it is likely that oceanic pH would need to decrease to less than pH 6.75 for any acidosis effects to compromise the productivity of this particular symbiosis. Since acidification will have the benefits of increased CO2 and will reach nowhere near such low pH levels as those extremes tested here, it is proposed that ocean acidification via increased dissolution of CO2 into our oceans will have no impact on the photosynthetic production of symbiotic cnidarians. Indeed, it is entirely likely that increased CO2 will add some benefit to the usually carbon-limited symbiotic zooxanthellae. Ocean acidification is not likely to benefit corals however, with compromised calcification rates likely to undermine the viability of the coral. Symbiotic sea anemones, which do not bio-mineralise CaCO3, are better placed to take advantage of the increased CO2 as we move toward more acidic oceans.</p>

Ocean Acidification: Comparative Impacts on the Photophysiology of a Temperate Symbiotic Sea Anemone and a Tropical Coral

<p>Ocean acidification has the potential to drastically alter the coral reef ecosystem by reducing the calcification rate of corals and other reef-builders, and hence a considerable amount of research is now focused on this issue. It also is conceivable that acidification may affect other physiological processes of corals. In particular, acidification may alter photosynthetic physiology and hence the productivity of the coraldinoflagellate symbiosis that is pivotal to the reef's survival and growth. However, very little is known about the impacts of acidification on the photophysiology of corals or, indeed, other invertebrate-algal symbioses. This gap in our knowledge was addressed here by measuring the impacts of acidification (pH 7.6 versus pH 8.1) on the photophysiology and health of the tropical coral Stylophora pistillata and its isolated dinoflagellate symbionts ('zooxanthellae'), and the temperate sea anemone Anthopleura aureoradiata. The comparative nature of this study allowed for any differences between tropical and temperate symbioses, and zooxanthellae in a symbiotic or free-living state, to be assessed. Corals, anemones and cultured zooxanthellae were maintained in flowthrough seawater systems, and treated either with non-acidified (control) seawater at pH 8.1, or seawater acidified with CO2 or HCl to pH 7.6. A variety of parameters, including zooxanthellar density, chlorophyll content, photosynthetic health (Yi), and the ratio of gross photosynthetic production to respiration (P:R) were measured via cell counts, spectrophotometry, respirometry and PAM fluorometry, at a series of time-points up to a maximum of 42 days. Acidification generated by the addition of CO2 had no discernible effect on Yi of either the corals or anemones. However, in the coral, chlorophyll content per zooxanthella cell increased by 25%, which was countered by a near-significant decline (22%) in the rate of gross photosynthesis per unit chlorophyll; as zooxanthellar density remained unchanged, this led to a constant P:R ratio. When acidified via CO2, the isolated zooxanthellae exhibited no impacts in recorded Yi or chlorophyll levels. The response of the anemone to acidification via CO2 was different to that observed in the coral, as the density of zooxanthellae increased, rather than the chlorophyll content per cell, leading to an increased rate of gross photosynthesis. However P:R again remained constant as the increased photosynthesis was matched by an increased rate of respiration. In contrast to the impacts of CO2, HCl adversely impacted the chlorophyll content per cell in both the isolated zooxanthellae and sea anemone, and Yi, gross photosynthesis per cell, and overall gross photosynthesis in the sea anemone; however, despite the decline in gross photosynthesis, P:R remained constant due to the concurrent decline in respiration. Unfortunately, the corals in the HCl experiment died due to technical issues. There are two plausible reasons for this difference between CO2 and HCl. Firstly, HCl may have caused intracellular acidosis which damaged chloroplast structure and photosynthetic function. Secondly, the increased levels of aqueous CO2 stimulated photosynthetic function and hence mitigated for the effects of lowered pH. In addition, evidence is presented for a pH threshold for A. aureoradiata of between pH 6 and pH 6.75 (acidified with HCl), at which point photosynthesis 'shuts-down'. This suggests that, even without the potentially beneficial effects from increased CO2 levels, it is likely that oceanic pH would need to decrease to less than pH 6.75 for any acidosis effects to compromise the productivity of this particular symbiosis. Since acidification will have the benefits of increased CO2 and will reach nowhere near such low pH levels as those extremes tested here, it is proposed that ocean acidification via increased dissolution of CO2 into our oceans will have no impact on the photosynthetic production of symbiotic cnidarians. Indeed, it is entirely likely that increased CO2 will add some benefit to the usually carbon-limited symbiotic zooxanthellae. Ocean acidification is not likely to benefit corals however, with compromised calcification rates likely to undermine the viability of the coral. Symbiotic sea anemones, which do not bio-mineralise CaCO3, are better placed to take advantage of the increased CO2 as we move toward more acidic oceans.</p>

Characterization of morpho-functional traits in mesophotic corals reveals optimized light capture and photosynthesis

The morphology and skeleton architecture of photosynthetic corals modulates the light capture and functioning of the coral-algal symbiosis on shallow-water corals. Since corals can thrive on mesophotic reefs under extreme light-limited conditions, we hypothesized that microskeletal coral features optimize light capture under low-light environments. Using micro-computed tomography scanning, we conducted a comprehensive three-dimensional (3D) assessment of small-scale skeleton morphology of the depth-generalist coral Stylophora pistillata collected from shallow (5 m) and mesophotic (45 m) depths. We detected a high phenotypic diversity between depths, resulting in two distinct morphotypes, with calyx diameter, theca height, and corallite marginal spacing contributing to most of the variation between depths. To determine whether such depth-specific morphotypes affect coral light capture and photosynthesis on the corallite-scale, we developed 3D simulations of light propagation based on photosynthesis-irradiance parameters. We found that corals associated with shallow morphotypes dissipated excess light through self-shading microskeletal features; while mesophotic morphotypes facilitated enhanced light absorption and photosynthesis under low-light conditions. We conclude that the mesophotic coral architecture provides a greater ability to trap solar energy and efficiently exploit the limited light conditions, and suggest that morphological modifications play a key role in the photoadaptation response to low-light.