The digitization, analysis, and processing technology of music signals are the core of digital music technology. There is generally a preprocessing process before the music signal processing. The preprocessing process usually includes antialiasing filtering, digitization, preemphasis, windowing, and framing. Songs in the popular wav format and MP3 format on the Internet are all songs that have been processed by digital technology and do not need to be digitalized. Preprocessing can affect the effectiveness and reliability of the feature parameter extraction of music signals. Since the music signal is a kind of voice signal, the processing of the voice is also applicable to the music signal. In the study of adaptive wave equation inversion, the traditional full-wave equation inversion uses the minimum mean square error between real data and simulated data as the objective function. The gradient direction is determined by the cross-correlation of the back propagation residual wave field and the forward simulation wave field with respect to the second derivative of time. When there is a big gap between the initial model and the formal model, the phenomenon of cycle jumping will inevitably appear. In this paper, adaptive wave equation inversion is used. This method adopts the idea of penalty function and introduces the Wiener filter to establish a dual objective function for the phase difference that appears in the inversion. This article discusses the calculation formulas of the accompanying source, gradient, and iteration step length and uses the conjugate gradient method to iteratively reduce the phase difference. In the test function group and the recorded music signal library, a large number of simulation experiments and comparative analysis of the music signal recognition experiment were performed on the extracted features, which verified the time-frequency analysis performance of the wave equation inversion and the improvement of the decomposition algorithm. The features extracted by the wave equation inversion have a higher recognition rate than the features extracted based on the standard decomposition algorithm, which verifies that the wave equation inversion has a better decomposition ability.