Spatial Variability Aware Deep Neural Networks (SVANN): A General Approach

Spatial variability is a prominent feature of various geographic phenomena such as climatic zones, USDA plant hardiness zones, and terrestrial habitat types (e.g., forest, grasslands, wetlands, and deserts). However, current deep learning methods follow a spatial-one-size-fits-all (OSFA) approach to train single deep neural network models that do not account for spatial variability. Quantification of spatial variability can be challenging due to the influence of many geophysical factors. In preliminary work, we proposed a spatial variability aware neural network (SVANN-I, formerly called SVANN ) approach where weights are a function of location but the neural network architecture is location independent. In this work, we explore a more flexible SVANN-E approach where neural network architecture varies across geographic locations. In addition, we provide a taxonomy of SVANN types and a physics inspired interpretation model. Experiments with aerial imagery based wetland mapping show that SVANN-I outperforms OSFA and SVANN-E performs the best of all.

Plant Hardiness Zone Map in Korea and an Analysis of the Distribution of Evergreen Trees in Zone 7b

Background and objective: This study was conducted to establish a Plant Hardiness Zone (PHZ) map, investigate the effect of global warming on changes in PHZ, and elucidate the difference in the distribution of evergreen trees between the central and southern region within hardiness Zone 7b in Korea. Methods: Mean annual extreme minimum temperature (EMT) and related temperature fluctuation data for 40 years (1981 to 2020) in each of the meteorological observation points were extracted from the Open MET Data Portal of the Korea Meteorological Administration. Using EMT data from 60 meteorological observation points, PHZs were classified according to temperature range in the USDA Plant Hardiness Zone Map. Changes in PHZs for each decade related to the effects of global warming were analyzed. Temperature fluctuation before and after the day of EMT were analyzed for 4 areas of Seoul, Suwon, Suncheon, and Jinju falling under Zone 7b. For statistical analysis, descriptive statistics and ANOVA were performed using the IBM SPSS 22 Statistics software package. Results: Plant hardiness zones in Korea ranged from 6a to 9b. Over four decades, changes to warmer PHZ occurred in 10 areas, especially in colder ones. Based on the analysis of daily temperature fluctuation, the duration of sub-zero temperatures was at least 2 days in Seoul and Suwon, while daily maximum temperatures were above zero in Suncheon and Jinju before and after EMT day. Conclusion: It was found that the duration of sub-zero temperatures in a given area is an important factor affecting the distribution of evergreen trees in PHZ 7b.

The Statewide Epidemiology of Mucormycosis Among Trauma Patients in Florida

Objectives Mucormycosis is a rare angioinvasive infection caused by filamentous fungi with a high lethality among the immunocompromised. In healthy people, the innate immune system is sufficient to prevent infection. The exception to this is deep tissue exposure seen during trauma. The purpose of this study is to evaluate the epidemiology of mucormycosis using a statewide population-based data set. Methods This is a retrospective cohort study of all hospital admissions for mucormycosis within the state of Florida from 1997 through the beginning of 2020. A distribution map was created to evaluate for geographic variation. Botanical growth zones, based on plant hardiness, used by state environmental agencies and landscapers were also used to detect possible patterns based on climate conditions throughout Florida. A multivariable regression analysis was performed to account for confounders and limit bias. Results A total of 1190 patients were identified for mucormycosis infection. Only 86 of these patients were admitted for trauma. Cutaneous infections were more prevalent among trauma patients while non-trauma patients had more pulmonary infections ( P = .04). Trauma patients with infection tended to be younger and less likely to suffer from comorbidities such as immunosuppression (36% vs 46%, P = .07) and diabetes (22.1% vs 47.1%, P ≤ .0001) as compared to their non-trauma counterparts. Mortality was similar with 17.8% for non-trauma patients and 15.1% for traumatized patients (AOR .80 [.42, 1.52]). Length of stay was longer for trauma patients (37.3 vs 23.0, P < .0001). Infections were less prominent in plant hardiness Zone 9 and Zone 10 as compared to Zone 8 (AOR .71 [.61, .82]; AOR .54 [.46, .64], respectively). Conclusion Trauma patients who develop infection from mucormycosis are at high risk of death despite being a younger and healthier population. Mucormycosis infections were primarily soft tissue based among trauma patients. These infections are more prevalent in colder regions within Florida.

Stakeholder Perceptions on the Need for Updated Tree Species Distribution Maps

Tree species distributions presented as range maps are powerful tools for forest-based decision-making processes. In the United States, Silvics of North America is a well-known reference for over 200 tree species. However, the current range maps are likely outdated due to changes in land use, advancements in technology, shifts in plant hardiness zones due to climate change, and shifting societal values that influence the development of these resources. Therefore, a survey was distributed to two stakeholder groups, registered foresters in four states and members of several professional organizations, to gain insight into whether Silvics of North America range maps should be updated. Although the survey delivery method varied between the two survey sampling frames, the opinions on updating species range maps between the two stakeholder groups were similar. Both groups indicated that updating the current range maps would be valuable and would best be informed by remote sensing, national field inventories, and expert insight, and by adding color and perhaps importance classes.

Preliminary assessments of shoot cold tolerance for American elm bred for enhanced tolerance to Dutch elm disease

Although Dutch elm disease (DED) is the primary threat to American elm (Ulmus americana L.), we hypothesized that shoot freezing injury may also limit tree productivity and survival in the north. We assessed shoot cold tolerance and field winter injury of American elm bred for DED tolerance planted in Lemington, VT. We tested for differences in cold tolerance associated with date, maternal DED tolerance source, paternal sources from plant hardiness zones 5a, 6a and 6b (determined using data from 1996-2005), and the interactions of these. Cold tolerance was greatest in the winter, followed by fall and then spring. For all dates, cold tolerance never differed between maternal DED tolerance sources. However, in mid-winter, paternal sources from zone 5a (coldest zone) were significantly more cold tolerant than sources from zone 6b (warmest zone), and sources from zone 6a were intermediate. Field freezing injury confirmed that shoots were only marginally cold tolerant relative to ambient temperature lows.

A Survey of Rose rosette virus and Eriophyid Mites Associated with Roses in the Southeastern United States

The eriophyid mite, Phyllocoptes fructiphilus, vectors the causal agent, Rose rosette virus (RRV), that results in rose rosette disease. Parts of the southeastern United States have remained free of the disease, except for infected plant material introductions that were eradicated. A survey of sampling points through Alabama, Georgia, and Mississippi (n = 204) revealed the southeastern border of RRV. The presence of RRV in symptomatic plant tissue samples (n = 39) was confirmed by TaqMan-quantitative reverse transcription polymerase chain reaction (RT-qPCR). Samples were also collected at every plot for detection of eriophyid mites, specifically for P. fructiphilus. Three different species of eriophyid mites were found to be generally distributed throughout Alabama, Georgia, and Mississippi. Most of these sites (n = 60) contained P. fructiphilus, found further south than previously thought, but in low populations (<10 mites/gram of tissue) south of the RRV line of incidence. Latitude was found to be significantly correlated with the probability of detecting RRV-positive plants, but plant hardiness zones were not. Plot factors such as plant size, wind barriers, and sun exposure were found to have no effect on P. fructiphilus or the presence of RRV. The reason for the absence of RRV and low populations of P. fructiphilus in this southeast region of the United States are unclear.

Status and potential distribution of the Asian carpenter bee, Xylocopa appendiculata Smith (Apidae, Xylocopini), in the United States

We update the geographical distribution for Xylocopa appendiculata Smith, from eastern Asia, which was first reported from the United States of America (USA) in 2013. After the publication by Dahlberg et al. (2013), there have been more sightings supporting the establishment of X. appendiculata in northern California. We used plant hardiness zones and maximum entropy (Maxent) modeling to estimate the potential distribution of X. appendiculata in the USA using specimen data from multiple occurrences (confirmed data from literature, museum specimens and validated data from Discover Life.org and iNaturalist.org). We include images and a list of diagnostic features for the identification of the subgenus Alloxylocopa Hurd and Moure and the species X. appendiculata so that it can be identified and reported to corresponding state or federal authorities, if necessary.

New Seed-Collection Zones for the Eastern United States: The Eastern Seed Zone Forum

Abstract Reforestation and restoration efforts have traditionally relied on “local” seed sources as planting stock. The term “local” has different meanings in different locales, since no single set of seed-collection zones has yet been widely adopted across the eastern United States. Given concerns about mitigating the effects of climate change, forest managers are increasingly seeking to move seed sources in a process called assisted migration, which would be facilitated if a common set of seed-collection zones were available. We developed a map of 245 seed-collection zones for 37 states by combining two ecologically important layers: plant hardiness zones and ecoregions. These new seed-collection zones should be used by seed collectors and nurseries to describe the origin of seed for plants and trees in the eastern United States. Common garden studies remain the gold standard for determining how far to move seed from any particular seed-collection zone. For species that have not been field-tested, seed movement that is limited either within a seed-collection zone or between adjacent seed-collection zones is a reasonable general guideline.

145 Eco-efficiency of Northeast U.S. grass-fed beef systems

Grass-fed beef systems (GFB) are one approach proposed to improve the sustainability of animal-sourced foods. Our objective was to estimate carbon (CF) and reactive nitrogen (NF) footprints and cost of production (COP) for northeastern U.S. GFB. A partial life cycle assessment was conducted using the Integrated Farm System Model (IFSM). Systems were characterized using surveys and interviews. Representative operations were simulated in IFSM by grouping farms with similar environments and forage management practices. Environments were defined using USDA Plant Hardiness Zones. Farms were categorized as feed sufficient (FS: produced all supplemental forage on-farm) or feed importing (FI; purchased all supplemental forage). Differences between zones and farm types were analyzed using Dunn’s test with a Bonferroni correction and the Kruskal-Wallis test, respectively. Warmer zones supported longer grazing seasons (P &lt; 0.01), greater pasture legume content (P &lt; 0.05), and denser stocking rates (P &lt; 0.01), resulting in twice the market weight production per hectare compared with farms in cooler zones (P &lt; 0.01). Grazing season length and pasture legume content were similar between farm types (P &gt; 0.1). FI herds were half the size of FS herds (P &lt; 0.01), used 37% more land per animal (P &lt; 0.01), and had 10% lighter market weights with 52% lower market weight production per hectare (P &lt; 0.05). CF, NF, and COP/animal were 1.1, 1.3, and 2.1-fold greater for FI farms, respectively. Zone differences in climate, soils, and pasture legume content affected footprints. In warmer zones where soils had greater clay content, N2O contributed a greater portion of CF and NF, and NO3 leaching was moderate. In the coolest zone with coarser soil, N2O contributed a small portion of CF and NF, with greater NO3 losses. Analyses suggest attention to nitrogen management, efficient resource utilization, and botanical composition might reduce CF and NF.