This paper focuses on the flora of scale-bearing chrysophytes from eight provinces located in the central part of Vietnam. Khanh Hoa, Phu Yen, Binh Dinh, Thua Thien Hue, Quang Tri, and Quang Binh provinces are located in the coastal area of Vietnam. Lam Dong and Dak Lak provinces represent mountain territories with an elevation of 500–2000 metres above sea level. In total, 212 water bodies of different origins were studied. Samples were obtained from swamp areas, lakes, rivers, reservoirs, ponds, and small temporary water bodies. In total, 76 taxa were identified by electron microscopic observations of samples. A total of 54 taxa were found in the mountainous provinces, while 73 were found in the coastal provinces. Of these, 51 species are common for both areas. The most diverse was the genus Mallomonas with 66 species, varieties, and forms; followed by Synura with 7 taxa; Chrysosphaerella with 2; and Spiniferomonas with 1. Seven taxa of the genus Mallomonas were not identified to the lower rank. All these unidentified specimens may potentially represent new species for science. Ten taxa are reported for the first time in Vietnam.