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2019 ◽  
Vol 12 (1) ◽  
Author(s):  
Lubna V. Richter ◽  
Huijun Yang ◽  
Mohammad Yazdani ◽  
Maureen R. Hanson ◽  
Beth A. Ahner

In the original version of the article [1], a calculation error resulted in a 3-order of magnitude mistake for the y-axis of the data reported in Fig. 5c and d.


2018 ◽  
Vol 11 (1) ◽  
Author(s):  
Lubna V. Richter ◽  
Huijun Yang ◽  
Mohammad Yazdani ◽  
Maureen R. Hanson ◽  
Beth A. Ahner

2011 ◽  
Vol 76 (3-5) ◽  
pp. 345-355 ◽  
Author(s):  
Benjamin N. Gray ◽  
Huijun Yang ◽  
Beth A. Ahner ◽  
Maureen R. Hanson

2008 ◽  
Vol 28 (8) ◽  
pp. 2598-2607 ◽  
Author(s):  
Aneeshkumar Gopalakrishnan Arimbasseri ◽  
Purnima Bhargava

ABSTRACT The genes transcribed by RNA polymerase III (Pol III) generally have intragenic promoter elements. One of them, the yeast U6 snRNA (SNR6) gene is activated in vitro by a positioned nucleosome between its intragenic box A and extragenic, downstream box B separated by ∼200 bp. We demonstrate here that the in vivo chromatin structure of the gene region is characterized by the presence of an array of positioned nucleosomes, with only one of them in the 5′ end of the gene having a regulatory role. A positioned nucleosome present between boxes A and B in vivo does not move when the gene is repressed due to nutritional deprivation. In contrast, the upstream nucleosome which covers the TATA box under repressed conditions is shifted ∼50 bp further upstream by the ATP-dependent chromatin remodeler RSC upon activation. It is marked with the histone variant H2A.Z and H4K16 acetylation in active state. In the absence of H2A.Z, the chromatin structure of the gene does not change, suggesting that H2A.Z is not required for establishing the active chromatin structure. These results show that the chromatin structure directly participates in regulation of a Pol III-transcribed gene under different states of its activity in vivo.


2006 ◽  
Vol 350 (3) ◽  
pp. 562-567 ◽  
Author(s):  
Jung-Won Keum ◽  
Jin-Ho Ahn ◽  
Cha-Yong Choi ◽  
Kyung-Ho Lee ◽  
Yong-Chan Kwon ◽  
...  

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