Peering into the Darkness: DNA Barcoding Reveals Surprisingly High Diversity of Unknown Species of Diptera (Insecta) in Germany

Determining the size of the German insect fauna requires better knowledge of several megadiverse families of Diptera and Hymenoptera that are taxonomically challenging. This study takes the first step in assessing these “dark taxa” families and provides species estimates for four challenging groups of Diptera (Cecidomyiidae, Chironomidae, Phoridae, and Sciaridae). These estimates are based on more than 48,000 DNA barcodes (COI) from Diptera collected by Malaise traps that were deployed in southern Germany. We assessed the fraction of German species belonging to 11 fly families with well-studied taxonomy in these samples. The resultant ratios were then used to estimate the species richness of the four “dark taxa” families (DT families hereafter). Our results suggest a surprisingly high proportion of undetected biodiversity in a supposedly well-investigated country: at least 1800–2200 species await discovery in Germany in these four families. As this estimate is based on collections from one region of Germany, the species count will likely increase with expanded geographic sampling.

Nomenclator, geographic and stratigraphic distribution of the family Triphoridae (Mollusca: Gastropoda)

The microgastropod family Triphoridae is one of the five most diverse marine molluscan families. It likely hosts a few thousand species worldwide, but its taxonomy has long been considered challenging due to the high diversity and subtle morphological characters needed for species delimitation. Consequently, only a small portion of the species appears to be formally described to date. However, further taxonomic work should be based on robust knowledge on the numerous names introduced so far. In this perspective, we have here compiled a list of all published names that can be attributed to the fossil and extant Triphoridae. We list 958 species and 75 genus names, of which 771 are known as extant species and 146 as fossil species, 41 are known from both fossil and extant records. We provide information on type locality and horizon, type material, synonymy and homonymy. Importantly, based on the review of hundreds of publications, we provide a preliminary overview of the geographic and stratigraphic distribution.

Diversity and community structure of Ephemeroptera in freshwater stream of Megamalai hills, Tamil Nadu, India

In the study on the diversity and community structure of Ephemeroptera in the freshwater stream of Chinnasuruli falls on Megamalai hills, a total of 523 specimens belonging to thirteen genera and five families were collected in six month periods. Of the five families, Teloganodidae and Leptophlebiidae exhibited high diversity and Caenidae showed low diversity. Choroterpes alagarensis (Leptophlebiidae) is the most dominant species. Diversity indices such as Shannon and Simpson indices showed that diversity was maximum in November and December and it was minimum in August and January. Canonical Correspondence Analysis revealed that rainfall, water flow, turbidity, and air temperature were the major stressors in affecting the Ephemeropteran community structure.

High Diversity and Abundance of Foraminifera Associated with Mediterranean Benthic Red Algae Mats

The Mediterranean Sea comprises habitats such as Posidonia oceanica seagrass meadows that exhibit high associated biodiversity of sessile organisms. Recent pilot research indicates that benthic mats formed by the scarcely investigated fleshy red alga Phyllophora crispa also host a high diversity of benthic fauna. Among the key taxa found in these mats in the recent pilot studies are benthic foraminifera that live as epiphytes on the red algae thalli. Knowledge about their abundance and species richness associated with this habitat in relation to reference habitats is missing. We thus carried out a comparative assessment focusing on foraminifera within samples from P. crispa mats and neighboring P. oceanica meadows on five different sampling sites around Giglio Island in the Tuscan Archipelago (Tyrrhenian Sea, Italy). A total of 104 different foraminiferal taxa were identified, of which a total of 85 taxa were found in P. crispa samples (46 exclusively in this habitat). This biodiversity was higher compared to other studies on phytal habitats in the Mediterranean Sea. The number of foraminiferal taxa associated with P. crispa was significantly higher (average 27.5 ± 8.1 taxa) compared to P. oceanica (leaves average 7.0 ± 3.6, shoots average 7.9 ± 3.4 taxa). The abundance of foraminifera (12,000 individuals m−2 surface area of P. crispa mat) was also higher than in the neighboring P. oceanica meadows (7792 individuals m−2 leaf and 8171 individuals m−2 shoot surface area). The most frequently found taxa across habitats were Miniacina miniacea, Lobatula lobatula, and Sejunctella sp. (24%, 20%, and 6% of the total population, respectively). Our results imply that P. crispa mats host an exceptional diversity of associated foraminifera that is even higher than those associated with seagrass meadows. Red algae mats built by P. crispa may thus be considered as potential refuge habitats and biodiversity reservoirs in management and conservation.

Diversity of the genus \(\textit{Camellia}\) L. (Theaceae) in Lam Dong province

Through field survey and morphological research, this study has determined that the Camellia genus in Lam Dong province, Vietnam has a high diversity of morphological, distribution and taxa characteristics. The species of Camellia genus in Lam Dong province are mostly shrubs and small trees. The narrow oblong leaves are a very common and typical characteristic for Camellia in Lam Dong province. The flowers of the species of Camellia are diverse with four main colours is white, yellow, pink and purple. The fruits are globose, flattened globose, wrinkled or uneven edges. Especially, the obovoid fruit only occurs in Lam Dong province. Most of the species of Camellia genus in this province are endemic. The study has added ten species of the Camellia genus, brings the total of species of Camellia genus to Lam Dong province to between sixteen and twenty six. This is the first study to evaluate Camellia diversity in Lam Dong province. It is also the first complete statistics on the number of species of Camellia genus in Lam Dong province to confirm that this province is the second diversity centre of Camellia of Vietnam following the first centre in the North of Vietnam.

Enzymatic Bioprospecting of Fungi Isolated from a Tropical Rainforest in Mexico

The humid tropical environment provides an ideal place for developing a high diversity of plants; this is why it is an interesting site for the enzymatic bioprospecting of fungi that are responsible for the recycling of organic matter in an efficient and accelerated way and whose enzymes could have multiple biotechnological applications. For this study, 1250 isolates of macroscopic and microscopic fungal morphotypes were collected from soil, leaf litter, and wood. One hundred and fifty strains (50 from each source) were selected for the enzymatic screening. From the first phase, 51 strains with positive activity for laccase, protease, amylase, xylanase, and lipase enzymes were evaluated, of which 20 were isolated from leaf litter, 18 from the soil, and 13 from wood. The 10 best strains were selected for the enzymatic quantification, considering the potency index and the production of at least two enzymes. High laccase activity was detected for Trametes villosa FE35 and Marasmius sp. CE25 (1179 and 710.66 U/mg, respectively), while Daedalea flavida PE47 showed laccase (521.85 U/mg) and protease activities (80.66 U/mg). Fusarium spp. PH79 and FS400 strains had amylase (14.0 U/mg, 49.23 U/mg) and xylanase activities (40.05 U/mg, 36.03 U/mg) respectively. These results confirm the enzymatic potential of fungi that inhabit little-explored tropical rainforests with applications in industry.

High diversity of bees detected in guarana crop and natural habitat due to the use of combined sampling methods

Bees are the main pollinators of native and agricultural plants. Identifying and knowing these insects responsible for the environmental service of pollination is essential for the maintenance and management of pollination in agricultural systems, especially in a high diversity biome as the Amazon rainforest. Some crops in this region are dependent of benefited by wild pollinators, especially native plants like guarana. To address methodological aspects of monitoring bee diversity, samplings were carried out in an agricultural environment (guarana crop, Paullinia cupana) surrounded by Amazon natural habitat at Manaus, Amazonas State. We used three combined methods (two passive traps: Malaise and yellow pan-traps, and one active: hand nets) in different periods, with the same number of samplings (12 each). In total, 4,143 native bees belonging to 171 species were sampled; 117 species (1,926 individuals) were collected with Malaise trap, 15 (91 individuals) with pan-traps, and 114 (2,126 individuals) through active sampling. Only seven species were common to all methods, 60 species on two methods and 104 species were unique to one sampling method (50 with Malaise, two with pan-traps, and 52 with hand nets). We reinforce the need for complementary sampling to known bee diversity as the best strategy here was the joint use of active samples and Malaise traps. Recently the concern with Amazon preservation has aroused worldwide interest, a fact that shreds of evidence the need for studies of biodiversity and taxonomy in several areas, since very little is known of this vast region.