A new approach to integrate phylogenetic structure and partner availability to study biotic specialization in ecological networks

Biotic specialization holds information about the assembly, evolution and stability of biological communities. Phylogenetic diversity metrics have been used to quantify biotic specialization, but their current implementations do not adequately account for the availability of the interacting partners. Also, the overdispersed pattern of phylogenetic specialization has been misinterpreted as an attribute of generalists. We developed an approach that resolves these issues by accounting for partner availability to quantify the phylogenetic structure of specialization (i.e., clustered, overdispersed, or random) in ecological networks. We showed that our approach avoids biases of previous methods. We also implemented it on empirical networks of host-parasite, avian seed-dispersal, lichenized fungi-cyanobacteria and coral-dinoflagellate interactions. We found a large proportion of taxa that interact with phylogenetically random partners, in some cases to a larger extent than detected with an existing method that does not account for partner availability. We also found many taxa that interact with phylogenetically clustered partners, while taxa with overdispersed partners were rare. Our results highlight the important role of randomness in shaping interaction networks, even in highly intimate symbioses, and provide a much-needed quantitative framework to assess the role that evolutionary history and symbiotic specialization play in shaping patterns of biodiversity.

Seed dispersal in Neuwiedia singapureana: novel evidence for avian endozoochory in the earliest diverging clade in Orchidaceae

Background Seed dispersal allows plants to colonize new habitats that has an significant influence on plant distribution and population dynamics. Orchids produce numerous tiny seeds without endosperm, which are considered to be mainly wind-dispersed. Here, we report avian seed dispersal for an early diverging orchid species, Neuwiedia singapureana, which produces fleshy fruits with hard seed coats in the understory of tropical forests. Results Neuwiedia singapureana produced fleshy fruits that turned red in autumn, and birds were confirmed to be the primary seed dispersers. As compared to its sister species, N. veratrifolia with dehiscent capsular fruits, embryos of N. singapureana were larger and enclosed by thickened and lignified seed coats. After passing through the digestive tracts of birds, the seeds still stayed alive, and the walls of seed coat contained several cracks. The germination percentage increased significantly for digested seeds as compared with seeds from intact fruits. Conclusion The thickened and lignified seed coat may protect seeds as they passed through the digestive tracts of birds. Taken together with a recent report of insect-mediated seed dispersal system in the subfamily Apostasioideae, the animal-mediated seed dispersal may be an adaptive mechanism promoting the success of colonization in dark understory habitats.

Is the European red fox a vector of the invasive basket asparagus (Asparagus aethiopicus) in eastern Australia?

Basket asparagus (Asparagus aethiopicus) has become a naturalised invasive plant in some coastal areas of Australia since its introduction in the late 19th century. Its spread through garden waste dumping and avian seed dispersal has been well documented and both are considered to be the primary means of dispersal. While a small number of avian vectors have been identified, no Australian studies have investigated the potential of mammals to disperse basket asparagus seeds. We collected basket asparagus seeds from fox (Vulpes vulpes) scats collected in the field, confirmed the viability of these seeds in germination trials, and further documented the germination of basket asparagus seeds from an undisturbed fox scat in situ. These results demonstrate that foxes consume and disperse basket asparagus seeds, and that these seeds are viable and germinate under field conditions. Foxes not only use basket asparagus stands as harbour, but can also facilitate the plant’s dispersal in coastal ecosystems.

Defaunation precipitates the extinction of evolutionarily distinct interactions in the Anthropocene

Species on Earth are interconnected with each other through ecological interactions. Defaunation can erode those connections, yet we lack evolutionary predictions about the consequences of losing interactions in human-modified ecosystems. We quantified the fate of the evolutionary history of avian–seed dispersal interactions across tropical forest fragments by combining the evolutionary distinctness of the pairwise-partner species, a proxy to their unique functional features. Both large-seeded plant and large-bodied bird species showed the highest evolutionary distinctness. We estimate a loss of 3.5 to 4.7 × 104 million years of cumulative evolutionary history of interactions due to defaunation. Bird-driven local extinctions mainly erode the most evolutionarily distinct interactions. However, the persistence of less evolutionarily distinct bird species in defaunated areas exerts a phylogenetic rescue effect through seed dispersal of evolutionarily distinct plant species.

An avian seed dispersal paradox: New Zealand's extinct megafaunal birds did not disperse large seeds

Often the mutualistic roles of extinct species are inferred based on plausible assumptions, but sometimes palaeoecological evidence can overturn such inferences. We present an example from New Zealand, where it has been widely assumed that some of the largest-seeded plants were dispersed by the giant extinct herbivorous moa (Dinornithiformes). The presence of large seeds in preserved moa gizzard contents supported this hypothesis, and five slow-germinating plant species ( Elaeocarpus dentatus, E. hookerianus, Prumnopitys ferruginea, P. taxifolia, Vitex lucens ) with thick seedcoats prompted speculation about whether these plants were adapted for moa dispersal. However, we demonstrate that all these assumptions are incorrect. While large seeds were present in 48% of moa gizzards analysed, analysis of 152 moa coprolites (subfossil faeces) revealed a very fine-grained consistency unparalleled in extant herbivores, with no intact seeds larger than 3.3 mm diameter. Secondly, prolonged experimental mechanical scarification of E. dentatus and P. ferruginea seeds did not reduce time to germination, providing no experimental support for the hypothesis that present-day slow germination results from the loss of scarification in moa guts. Paradoxically, although moa were New Zealand's largest native herbivores, the only seeds to survive moa gut passage intact were those of small-seeded herbs and shrubs.

Quantifying species contributions to ecosystem processes: a global assessment of functional trait and phylogenetic metrics across avian seed-dispersal networks

Quantifying the role of biodiversity in ecosystems not only requires understanding the links between species and the ecological functions and services they provide, but also how these factors relate to measurable indices, such as functional traits and phylogenetic diversity. However, these relationships remain poorly understood, especially for heterotrophic organisms within complex ecological networks. Here, we assemble data on avian traits across a global sample of mutualistic plant–frugivore networks to critically assess how the functional roles of frugivores are associated with their intrinsic traits, as well as their evolutionary and functional distinctiveness. We find strong evidence for niche complementarity, with phenotypically and phylogenetically distinct birds interacting with more unique sets of plants. However, interaction strengths—the number of plant species dependent on a frugivore—were unrelated to evolutionary or functional distinctiveness, largely because distinct frugivores tend to be locally rare, and thus have fewer connections across the network. Instead, interaction strengths were better predicted by intrinsic traits, including body size, gape width and dietary specialization. Our analysis provides general support for the use of traits in quantifying species ecological functions, but also highlights the need to go beyond simple metrics of functional or phylogenetic diversity to consider the multiple pathways through which traits may determine ecological processes.