Habitat Shift for Plankton: The Living Side of Benthic-Pelagic Coupling in the Mar Piccolo of Taranto (Southern Italy, Ionian Sea)

Resting stages represent the answer for species to the variability of environmental conditions. In confined marine habitats, variability of conditions is high, and bottoms host plankton resting stages in the so-called “marine cyst banks”. The Mar Piccolo of Taranto was chosen as a pilot site in which to investigate how marine cyst banks and plankton affect each other in the living part of the benthic–pelagic coupling. The attempt was based on the use of multiple devices for integrated sampling of benthic and pelagic stages and allowed us to identify 207 taxa/categories in the whole system (127 as active forms, 91 as resting stages). The sediments added 80 taxa to the plankton list obtained only from the water column, thus confirming the importance of this kind of approach in perceiving the actual diversity of the studied site. The sediment cyst bank involved 0.15–1.00% of its content in daily benthic-pelagic exchanges, in terms of cyst germination and import, respectively. In addition, the cyst production, which was higher than the cyst germination, is responsible for the existence of a permanent biological reservoir in the sediments. The benthic-pelagic coupling, however, was completely depicted in the present investigation only for seven taxa. This result is due to the still scant knowledge of the life cycles and life histories of single species. Apart from the identification difficulties that still have to be clarified (which cysts belong to which species), the cycle presence/absence is also characterized by the diversification of strategies adopted by each species. The observation of plankton dynamics from the benthos point of view was useful and informative, unveiling a huge assemblage of resting forms in the sediments only minimally affected by cyst import/export, because it is more devoted to a storing role over long periods. Consequently, the continuation of life cycle studies appears necessary to understand the diversity of strategies adopted by the majority of plankton species.

Sediment Resuspension and Associated Extracellular Enzyme Activities Measured ex situ: A Mechanism for Benthic-Pelagic Coupling in the Deep Gulf of Mexico

Sediment resuspension caused by near-bed currents mediates exchange processes between the seafloor and the overlying water column, known as benthic-pelagic coupling. To investigate the effects of sediment resuspension on microbial enzyme activities in bottom waters (<500 m), we conducted onboard erosion experiments using sediment cores taken with a multi-corer from six deep-sea sites in the northern Gulf of Mexico. We then incubated the core-top water with resuspended sediments in roller tanks to simulate bottom water conditions following sediment resuspension. Bacterial cell abundance, particulate organic matter content, and potential rates of three hydrolytic enzymes (leucine aminopeptidases – PEP; β-glucosidases – GLU, lipases – LIP) were monitored during the experimentally-generated erosion events and subsequently in the roller tanks to examine whether resuspension of deep-sea sediments enhances activities of extracellular enzymes in overlying waters. Surficial sediments were resuspended at critical shear stress velocities between 1.4 and 1.7 cm s–1, which parallel bottom water currents of 28 and 34 cm s–1. Only one of our nine cores resisted experimentally generated bottom shear stresses and remained undisturbed, possibly as a result of oil residues from natural hydrocarbon seeps at the investigated site. The most notable enzymatic responses to sediment resuspension were found for LIP activities that increased in overlying waters of all eight of our resuspended cores and remained at high levels during the roller tank incubations. PEP and GLU showed orders of magnitude lower rates and more variable responses to experimentally resuspended sediments compared with LIP. We also found a disconnect between enzyme activities and bacterial cell numbers, indicating a major role of extracellular enzymes physically disconnected from microbial cells in our experiments. Our results demonstrate that sediment resuspension may promote organic matter breakdown in bottom waters by supplying extracellular enzymes without requiring a bacterial growth response. The marked increase in LIP activity suggests that resuspended enzymes may affect the degradation of petroleum hydrocarbons, including those from the natural seeps that are abundant in the investigation area.

The Effects of the Nonnative Brittle Star Ophiothela Mirabilis Verrill, 1867 on the Feeding Performance of an Octocoral Host in a Southwestern Atlantic Rocky Shore

The Pacific epizoic brittle star Ophiothela mirabilis Verrill, 1867 has widely spread and colonized hosts at high densities along the Western Atlantic. We assessed the impacts of O. mirabilis on the feeding performance of the preferred host Leptogorgia punicea (Milne Edwards & Haime, 1857) through in situ experiments using incubation chambers and estimated its putative effects on the benthic-pelagic coupling processes of a rocky shore system. The feeding rates and heterotrophic carbon inputs of L. punicea treatments with high colonization by O. mirabilis (5.4 ± 0.6 individuals cm− 2 of host area) were compared to host controls naturally without brittle stars. No significant differences in host feeding performance were observed between the control and treatments. Overall, L. punicea ingested 2,688,569 ± 1,627,948 particles g DW (dry weight)−1 hour− 1 (mean ± standard deviation), corresponding to 156.8 ± 207.5 µg of carbon (C) g DW− 1 hour− 1. Therefore, although octocorals hosting O. mirabilis may have impaired polyp opening and extension, their feeding performance remains similar. In this sense, the impact of O. mirabilis on the carbon flux of the rocky shore system driven by octocoral ingestion is minimal. The grazing rate of 67.4 ± 89.2 mg C m− 2 day− 1 highlights the significant role of L. punicea in such benthic-pelagic coupling processes. Notwithstanding, further laboratory and field experimental studies assessing the effects on host taxa with distinct morphological and functional features are needed to better understand the responses of the recipient hard-bottom systems along the Western Atlantic to increasing densities of O. mirabilis.

Benthic Metabolism in Fluvial Sediments with Larvae of Lampetra sp

Lampreys spend their larval stage within fine sand fluvial sediments, where they burrow and act as filter feeders. Lamprey larvae (ammocoetes) can significantly affect benthic-pelagic coupling and nutrient cycling in rivers, due to high densities. However, their bioturbation, feeding and excretion activities are still poorly explored. These aspects were investigated by means of laboratory incubations of intact sediments added with ammocoetes and of animals alone. Oxygen respiration, nutrient fluxes and excretion rates were determined. Individual ammocoete incubations suggested that biomass-specific oxygen consumption and ammonium, reactive phosphorus and silica excretion were size-dependent, and greater in small compared to large individuals. The comparison of ammocoetes metabolic rates with rates measured in intact sediments revealed that ammocoetes activity decreases significantly when they are burrowed in sediments. Furthermore, results suggest that a major fraction of ammonium excreted by ammocoetes was assimilated by benthic microbes or microalgae to overcome in situ N-limitation. Alternatively, part of the excreted ammonium was oxidized and denitrified within sediments, as nitrate uptake rather increased along with ammocoetes density. Ammocoetes excreted reactive phosphorus and silica but such production was not apparent in bioturbated sediments, likely due to microbial or microalgal uptake or to immobilization in sediments.

The Importance of Food Pulses in Benthic-Pelagic Coupling Processes of Passive Suspension Feeders

Benthic-pelagic coupling processes and the quantity of carbon transferred from the water column to the benthic suspension feeders needs multiple intensive sampling approaches where several environmental variables and benthos performance are quantified. Here, activity, dietary composition, and capture rates of three Mediterranean gorgonians (Paramuricea clavata, Eunicella singularis, and Leptogorgia sarmentosa) were assessed in an intensive cycle considering different variables such as the seston concentration and quality (e.g., carbon, nitrogen, and zooplankton), the colony branch patterns, and the energetic input of the single species (i.e., mixotrophic and heterotrophic). The three species showed clear differences in their impact on the seston concentration. Paramuricea clavata, the most densely distributed, showed a greater impact on the near bottom water column seston. The lowest impact of E. singularis on the seston could be explained by its mixotrophy and colony branching pattern. Leptogorgia sarmentosa had a similar impact as E. singularis, having a much more complex branching pattern and more than an order of magnitude smaller number of colonies per meter square than the other two octocorals. The amount of carbon ingested in the peaks of the capture rates in the three species may cover a non-neglectable proportion of the potential carbon fluxes.

Gut Microbial Composition and Diversity in Four Ophiuroid Species: Divergence Between Suspension Feeder and Scavenger and Their Symbiotic Microbes

Gut microbiota have important roles in the survival and adaptation of the host. Ophiuroids, as the worldwide dominant benthos, have ecological roles in benthic–pelagic coupling in the sea floor. However, little is known about the composition and diversity of their gut microbiota and its potential functions in benthic ecosystems. In present study, we preformed 16S rRNA sequencing and function analysis in four dominant species (Stegophiura sladeni, Ophiopholis mirabilis, Ophiura sarsii vadicola, and Ophiura kinbergi) with two feeding types (suspension feeding/herbivores and scavenger/carnivores) from the Yellow Sea, China. Results showed that 56 phyla and 569 genera of microbiota were identified among ophiuroid guts. Multivariate and diversity analyses showed that the ophiuroid gut microbiota were independent and have higher biodiversity to the sediment microbial in the Yellow Sea. Phyla Proteobacteria, Firmicutes, Tenericutes, and Bacteroidetes were the dominant bacteria, with more than 80% abundance among the four ophiuroid species. A comparison among the gut microbial compositions among four ophiuroids showed the similarity of two offshore carnivore ophiuroids (S. sladeni and O. sarsii vadicola) and variation in the dominant microbiota types of three nearshore ophiuroids (S. sladeni, O. mirabilis, and O. kinbergi). The functional analysis revealed the significant differences of the environment-related expression in S. sladeni gut microbiota between nearshore and offshore environments. The Phylogenetic Investigation of Communities by Reconstruction of Unobserved States (PICRUSt) functional annotation showed the significant divergence of metabolism pathways between two nearshore species, the herbivores O. mirabilis and carnivores S. sladeni, such as the Lipid metabolism, Carbohydrate metabolism, and Metabolism of cofactors and vitamins. The homolog search and phylogenetic analysis identified the first gut symbiotic Candidatus Hepatoplasma in S. sladeni with important roles for the nutrient metabolisms. Overall, our study reported the comprehensive data of ophiuroid gut microbiota, while the functional microbiome provides insight into the physiology and environmental adaptation in ophiuroids.