Systematic Interrogation of Protein Refolding Under Cellular-Like Conditions

The journey by which proteins navigate their energy landscapes to their native structures is complex, involving (and sometimes requiring) many cellular factors and processes operating in partnership with a given polypeptide chain's intrinsic energy landscape. The cytosolic environment and its complement of chaperones play critical roles in granting proteins safe passage to their native states; however, the complexity of this medium has generally precluded biophysical techniques from interrogating protein folding under cellular-like conditions for single proteins, let alone entire proteomes. Here, we develop a limited-proteolysis mass spectrometry approach paired within an isotope-labeling strategy to globally monitor the structures of refolding E. coli proteins in the cytosolic medium and with the chaperones, GroEL/ES (Hsp60) and DnaK/DnaJ/GrpE (Hsp70/40). GroEL can refold the majority (85%) of the E. coli proteins for which we have data, and is particularly important for restoring acidic proteins and proteins with high molecular weight, trends that come to light because our assay measures the structural outcome of the refolding process itself, rather than indirect measures like binding or aggregation. For the most part, DnaK and GroEL refold a similar set of proteins, supporting the view that despite their vastly different structures, these two chaperones both unfold misfolded states, as one mechanism in common. Finally, we identify a cohort of proteins that are intransigent to being refolded with either chaperone. The data support a model in which chaperone-nonrefolders have evolved to fold efficiently once and only once, co-translationally, and remain kinetically trapped in their native conformations.

Revealing x-ray and gamma ray temporal and spectral similarities in the GRB 190829A afterglow

Gamma-ray bursts (GRBs), which are bright flashes of gamma rays from extragalactic sources followed by fading afterglow emission, are associated with stellar core collapse events. We report the detection of very-high-energy (VHE) gamma rays from the afterglow of GRB 190829A, between 4 and 56 hours after the trigger, using the High Energy Stereoscopic System (H.E.S.S.). The low luminosity and redshift of GRB 190829A reduce both internal and external absorption, allowing determination of its intrinsic energy spectrum. Between energies of 0.18 and 3.3 tera–electron volts, this spectrum is described by a power law with photon index of 2.07 ± 0.09, similar to the x-ray spectrum. The x-ray and VHE gamma-ray light curves also show similar decay profiles. These similar characteristics in the x-ray and gamma-ray bands challenge GRB afterglow emission scenarios.

Barium-based scintillating MOFs for X-ray dosage detection with intrinsic energy resolution via luminescent multidentate naphthalene disulfonate moieties

Non-toxic Ba-SMOFs assembled by luminescent multidentate naphthalene-sulfonate moieties exhibit merited intrinsic energy resolution for X-ray dosage detection.

Asymmetric carrier transport and weak localization in few layer graphene grown directly on dielectric substrate

Temperature-dependent electrical and magneto-transport measurements have been performed on devices comprised of few layer (4L) graphene grown directly on SiO2/Si substrates using a CVD method. Intrinsic energy band-gap of 4.6...

Intrinsic energy spread and bunch length growth in plasma-based accelerators due to betatron motion

Plasma-based accelerators (PBAs), having demonstrated the production of GeV electron beams in only centimetre scales, offer a path towards a new generation of highly compact and cost-effective particle accelerators. However, achieving the required beam quality, particularly on the energy spread for applications such as free-electron lasers, remains a challenge. Here we investigate fundamental sources of energy spread and bunch length in PBAs which arise from the betatron motion of beam electrons. We present an analytical theory, validated against particle-in-cell simulations, which accurately describes these phenomena. Significant impact on the beam quality is predicted for certain configurations, explaining previously observed limitations on the achievable bunch length and energy spread. Guidelines for mitigating these contributions towards high-quality beams are deduced.