The Notorious Worldwide Wildlife Markets, Selling the Hotspot Zoonotic Reservoir Hosts, are Escalating the Chance of the Next Deadly Viral Pandemic

2021 ◽  
Author(s):  
Neloy Kumar Chakroborty ◽  
Damanjot Kaur
Keyword(s):  
Reservoir Hosts

Chapter 11: General epidemiology of TBE

2020 ◽  
Keyword(s):  
Eastern Siberia ◽  
Genetic Lineages ◽  
Phylogenetic Studies ◽  
Tick Borne Encephalitis ◽  
Natural Foci ◽  
Genetic Sequences ◽  
Tick Borne Encephalitis Virus ◽  
Almost All ◽  
Far Eastern ◽  
Reservoir Hosts

Tick-borne encephalitis virus (TBEV) exists in natural foci, which are areas where TBEV is circulating among its vectors (ticks of different species and genera) and reservoir hosts (usually rodents and small mammals). Based on phylogenetic studies, four TBEV subtypes (Far-Eastern, Siberian, European, Baikalian) and two putative subtypes (Himalayan and “178-79” group) are known. Within each subtype, some genetic lineages are described. The European subtype (TBEV-EU) (formerly known also as the “Western subtype”) of TBEV is prevalent in Europe, but it was also isolated in Western and Eastern Siberia in Russia and South Korea. The Far-Eastern subtype (TBEV-FE) was preferably found in the territory of the far-eastern part of Eurasia, but some strains were isolated in other regions of Eurasia. The Siberian (TBEV-SIB) subtype is the most common and has been found in almost all TBEV habitat areas. The Baikalian subtype is prevalent around Lake Baikal and was isolated several times from ticks and rodents. In addition to the four TBEV subtypes, one single isolate of TBEV (178-79) and two genetic sequences (Himalayan) supposed to be new TBEV subtypes were described in Eastern Siberia and China. The data on TBEV seroprevalence in humans and animals can serve as an indication for the presence or absence of TBEV in studied area.

DETECTION OF ALFACORONAVIRUSES, BETACORONAVIRUSES AND ASTROVIRUSES IN BAT FECAL SAMPLES FROM MOSCOW REGION

2020 ◽  
Author(s):  
E.V. Korneenko ◽  
◽  
А.E. Samoilov ◽  
I.V. Artyushin ◽  
M.V. Safonova ◽  
...  
Keyword(s):  
High Throughput ◽  
Viral Genome ◽  
High Throughput Sequencing ◽  
Pcr Amplification ◽  
Moscow Region ◽  
Fecal Samples ◽  
Genus Level ◽  
Zoonotic Viruses ◽  
Reservoir Hosts ◽  
Blastn Search

In our study we analyzed viral RNA in bat fecal samples from Moscow region (Zvenigorod district) collected in 2015. To detect various virus families and genera in bat fecal samples we used PCR amplification of viral genome fragments, followed by high-throughput sequencing. Blastn search of unassembled reads revealed the presence of viruses from families Astroviridae, Coronaviridae and Herpesviridae. Assembly using SPAdes 3.14 yields contigs of length 460–530 b.p. which correspond to genome fragments of Coronaviridae and Astroviridae. The taxonomy of coronaviruses has been determined to the genus level. We also showed that one bat can be a reservoir of several virus genuses. Thus, the bats in the Moscow region were confirmed as reservoir hosts for potentially zoonotic viruses.

scholarly journals Updated and Validated Pan-Coronavirus PCR Assay to Detect All Coronavirus Genera

Viruses ◽  
2021 ◽  
Vol 13 (4) ◽  
pp. 599
Author(s):  
Myndi G. Holbrook ◽  
Simon J. Anthony ◽  
Isamara Navarrete-Macias ◽  
Theo Bestebroer ◽  
Vincent J. Munster ◽  
...  
Keyword(s):  
Host Species ◽  
High Sensitivity ◽  
Respiratory Illness ◽  
Reservoir Host ◽  
Pcr Assay ◽  
Wildlife Reservoirs ◽  
Viral Surveillance ◽  
Reservoir Hosts

Coronavirus (CoV) spillover events from wildlife reservoirs can result in mild to severe human respiratory illness. These spillover events underlie the importance of detecting known and novel CoVs circulating in reservoir host species and determining CoV prevalence and distribution, allowing improved prediction of spillover events or where a human–reservoir interface should be closely monitored. To increase the likelihood of detecting all circulating genera and strains, we have modified primers published by Watanabe et al. in 2010 to generate a semi-nested pan-CoV PCR assay. Representatives from the four coronavirus genera (α-CoVs, β-CoVs, γ-CoVs and δ-CoVs) were tested and all of the in-house CoVs were detected using this assay. After comparing both assays, we found that the updated assay reliably detected viruses in all genera of CoVs with high sensitivity, whereas the sensitivity of the original assay was lower. Our updated PCR assay is an important tool to detect, monitor and track CoVs to enhance viral surveillance in reservoir hosts.

scholarly journals Spatial and temporal patterns of the emerging tick-borne pathogen Borrelia miyamotoi in blacklegged ticks (Ixodes scapularis) in New York

2021 ◽  
Vol 14 (1) ◽  
Author(s):  
F. Keesing ◽  
D. J. McHenry ◽  
M. H. Hersh ◽  
R. S. Ostfeld
Keyword(s):  
New York ◽  
Ixodes Scapularis ◽  
Quantitative Polymerase Chain Reaction ◽  
Human Infection ◽  
Ixodid Ticks ◽  
Transovarial Transmission ◽  
Infection Prevalence ◽  
Borrelia Miyamotoi ◽  
Spatial And Temporal Patterns ◽  
Reservoir Hosts

AbstractBorrelia miyamotoi, a bacterium that causes relapsing fever, is found in ixodid ticks throughout the northern hemisphere. The first cases of human infection with B. miyamotoi were identified in 2011. In the eastern USA, blacklegged ticks (Ixodes scapularis) become infected by feeding on an infected vertebrate host, or through transovarial transmission. We surveyed B. miyamotoi prevalence in ticks within forested habitats in Dutchess County, New York, and identified possible reservoir hosts. To assess spatial variation in infection, we collected questing nymphal ticks at > 150 sites. To assess temporal variation in infection, we collected questing nymphs for 8 years at a single study site. We collected questing larval ticks from nine plots to estimate the amount of transovarial transmission. To evaluate potential reservoir hosts, we captured 14 species of mammal and bird hosts naturally infested with larval blacklegged ticks and held these hosts in the laboratory until ticks fed to repletion and molted to nymphs. We determined infection for all ticks using quantitative polymerase chain reaction. The overall infection prevalence of questing nymphal ticks across all sites was ~ 1%, but prevalence at individual sites was as high as 9.1%. We detected no significant increase in infection through time. Only 0.4% of questing larval ticks were infected. Ticks having fed as larvae from short-tailed shrews, red squirrels, and opossums tended to have higher infection prevalence than did ticks having fed on other hosts. Further studies of the role of hosts in transmission are warranted. The locally high prevalence of B. miyamotoi in the New York/New England landscape suggests the importance of vigilance by health practitioners and the public.

scholarly journals Ecological Factors Characterizing the Prevalence of Bacterial Tick-Borne Pathogens in Ixodes ricinus Ticks in Pastures and Woodlands

2010 ◽  
Vol 76 (13) ◽  
pp. 4413-4420 ◽  
Author(s):  
Lénaïg Halos ◽  
Séverine Bord ◽  
Violaine Cotté ◽  
Patrick Gasqui ◽  
David Abrial ◽  
...  
Keyword(s):  
Forest Fragmentation ◽  
Ixodes Ricinus ◽  
Spotted Fever ◽  
Ecological Factors ◽  
Adult Tick ◽  
Reservoir Host ◽  
Host Community ◽  
Infection Prevalence ◽  
Spotted Fever Group ◽  
Reservoir Hosts

ABSTRACT Ecological changes are recognized as an important driver behind the emergence of infectious diseases. The prevalence of infection in ticks depends upon ecological factors that are rarely taken into account simultaneously. Our objective was to investigate the influences of forest fragmentation, vegetation, adult tick hosts, and habitat on the infection prevalence of three tick-borne bacteria, Borrelia burgdorferi sensu lato, Anaplasma phagocytophilum, and Rickettsia sp. of the spotted fever group, in questing Ixodes ricinus ticks, taking into account tick characteristics. Samples of questing nymphs and adults were taken from 61 pastures and neighboring woodlands in central France. The ticks were tested by PCR of pools of nymphs and individual adults. The individual infection prevalence was modeled using multivariate regression. The highest infection prevalences were found in adult females collected in woodland sites for B. burgdorferi sensu lato and A. phagocytophilum (16.1% and 10.7%, respectively) and in pasture sites for Rickettsia sp. (8.7%). The infection prevalence in nymphs was lower than 6%. B. burgdorferi sensu lato was more prevalent in woodlands than in pastures. Forest fragmentation favored B. burgdorferi sensu lato and A. phagocytophilum prevalence in woodlands, and in pastures, the B. burgdorferi sensu lato prevalence was favored by shrubby vegetation. Both results are probably because large amounts of edges or shrubs increase the abundance of small vertebrates as reservoir hosts. The Rickettsia sp. prevalence was maximal on pasture with medium forest fragmentation. Female ticks were more infected by B. burgdorferi sensu lato than males and nymphs in woodland sites, which suggests an interaction between the ticks and the bacteria. This study confirms the complexity of the tick-borne pathogen ecology. The findings support the importance of small vertebrates as reservoir hosts and make a case for further studies in Europe on the link between the composition of the reservoir host community and the infection prevalence in ticks.

scholarly journals Chagas' disease in the Brazilian Amazon: I - a short review

1994 ◽  
Vol 36 (4) ◽  
pp. 363-368 ◽  
Author(s):  
José Rodrigues Coura ◽  
Angela Cristina Verissimo Junqueira ◽  
Cristina Maria Giordano ◽  
Ilra Renata Komoda Funatsu
Keyword(s):  
Trypanosoma Cruzi ◽  
Chagas Disease ◽  
Human Population ◽  
Brazilian Amazon ◽  
Short Review ◽  
Ecological Balance ◽  
Domestic Cycle ◽  
Endemic Areas ◽  
Reservoir Hosts

At least eighteen species of triatominae have been found in the Brazilian Amazon, nine of them naturally infected with Trypanosoma cruzi or "cruzi-like" trypanosomes and associated with numerous wild reservoirs. Despite the small number of human cases of Chagas' disease described to date in the Brazilian Amazon the risk that the disease will become endemic in this area is increasing for the following reasons: a) uncontrolled deforestation and colonization altering the ecological balance between reservoir hosts and wild vectors; b) the adaptation of reservoir hosts of T.cruzi and wild vectors to peripheral and intradomiciliary areas, as the sole feeding alternative; c) migration of infected human population from endemic areas, accompanied by domestic reservoir hosts (dogs and cats) or accidentally carrying in their baggage vectors already adapted to the domestic habitat. In short, risks that Chagas' disease will become endemic to the Amazon appear to be linked to the transposition of the wild cycle to the domestic cycle in that area or to transfer of the domestic cycle from endemic areas to the Amazon.

The role of goats as reservoir hosts for bovine herpes virus 1 under field conditions

2018 ◽  
Vol 51 (4) ◽  
pp. 753-758 ◽  
Author(s):  
Sibel Gür ◽  
Nural Erol ◽  
Orhan Yapıcı ◽  
Mehmet Kale ◽  
Mehmet Tolga Tan ◽  
...  
Keyword(s):  
Herpes Virus ◽  
Field Conditions ◽  
Bovine Herpes Virus 1 ◽  
Herpès Virus ◽  
Reservoir Hosts

scholarly journals A peridomestic population of the tsetse fly Glossina palpalis palpalis Robineau-Desvoidy, 1830 (Diptera: Glossinidae) at Kontagora town, Niger state, Nigeria

2004 ◽  
Vol 11 (4) ◽  
pp. 599-610 ◽  
Author(s):  
A. B. Ahmed
Keyword(s):  
Tsetse Fly ◽  
Glossina Palpalis Palpalis ◽  
Infection Rates ◽  
Wet Season ◽  
Abnormal Behaviour ◽  
The Public ◽  
Close Proximity ◽  
Reservoir Hosts ◽  
Glossina Palpalis ◽  
Wild Life

The present article considers some aspects of a peridomestic population of the tsetse fly Glossina palpalis palpalis Robineau-Desvoidy, 1830 in Kontagora, Nigeria. This situation characterizes an abnormal behaviour of the vector, and it is of significant epidemiological importance. Data on the ecology of this species were collected in 1995 and 1999. The results indicated that the species exists during both dry and wet seasons; approximately 30.0% of the catches were gorged with blood giving a MHS of 2.4, indicating a well-nourished population. Dissection of inseminated pars indicated pregnancy rates of approximately 30.0% and 70.0% in the dry and wet seasons and the presence of all 4 stages of pregnancy, suggesting that breeding occurs at both seasons. Longevity of flies was approximately 16 days in dry season and 25 days in the wet season. Overall results indicated that vector/host contact was high and the fly population has adapted and actively breeding in the area. Trypanosome infection rates of 18.2% consist of 1 brucei-type and 5 vivax-type infections. The public health implications of the close proximity of the wild natural reservoir hosts of the human T. b. gambiense Dutton, 1902 parasites at the Kainji Wild Life park is discussed.

scholarly journals Fatal exudative dermatitis in island populations of red squirrels (Sciurus vulgaris): spillover of a virulent Staphylococcus aureus clone (ST49) from reservoir hosts

2021 ◽  
Vol 7 (5) ◽  
Author(s):  
Kay Fountain ◽  
Tiffany Blackett ◽  
Helen Butler ◽  
Catherine Carchedi ◽  
Anna-Katarina Schilling ◽  
...  
Keyword(s):  
Staphylococcus Aureus ◽  
Type Species ◽  
Small Ruminants ◽  
Sciurus Vulgaris ◽  
Red Squirrels ◽  
Content Type ◽  
Island Populations ◽  
Link Type ◽  
Bacterial Cell Membrane ◽  
Reservoir Hosts

Fatal exudative dermatitis (FED) is a significant cause of death of red squirrels (Sciurus vulgaris) on the island of Jersey in the Channel Islands where it is associated with a virulent clone of Staphylococcus aureus, ST49. S. aureus ST49 has been found in other hosts such as small mammals, pigs and humans, but the dynamics of carriage and disease of this clone, or any other lineage in red squirrels, is currently unknown. We used whole-genome sequencing to characterize 228 isolates from healthy red squirrels on Jersey, the Isle of Arran (Scotland) and Brownsea Island (England), from red squirrels showing signs of FED on Jersey and the Isle of Wight (England) and a small number of isolates from other hosts. S. aureus was frequently carried by red squirrels on the Isle of Arran with strains typically associated with small ruminants predominating. For the Brownsea carriage, S. aureus was less frequent and involved strains associated with birds, small ruminants and humans, while for the Jersey carriage S. aureus was rare but ST49 predominated in diseased squirrels. By combining our data with publicly available sequences, we show that the S. aureus carriage in red squirrels largely reflects frequent but facile acquisitions of strains carried by other hosts sharing their habitat (‘spillover’), possibly including, in the case of ST188, humans. Genome-wide association analysis of the ruminant lineage ST133 revealed variants in a small number of mostly bacterial-cell-membrane-associated genes that were statistically associated with squirrel isolates from the Isle of Arran, raising the possibility of specific adaptation to red squirrels in this lineage. In contrast there is little evidence that ST49 is a common carriage isolate of red squirrels and infection from reservoir hosts such as bank voles or rats, is likely to be driving the emergence of FED in red squirrels.

scholarly journals Cutaneous Leishmaniasis in dogs: is high seroprevalence indicative of a reservoir role?

Parasitology ◽  
2015 ◽  
Vol 142 (9) ◽  
pp. 1202-1214 ◽  
Author(s):  
JOSÉ E. CALZADA ◽  
AZAEL SALDAÑA ◽  
KADIR GONZÁLEZ ◽  
CHYSTRIE RIGG ◽  
VANESSA PINEDA ◽  
...  
Keyword(s):  
Cutaneous Leishmaniasis ◽  
Complex Disease ◽  
Basic Reproductive Number ◽  
Sand Fly ◽  
Reproductive Number ◽  
Cross Sectional ◽  
Rich Diversity ◽  
Ecosystem Level ◽  
Reservoir Hosts ◽  
Sand Fly Vectors

SUMMARYAmerican cutaneous leishmaniasis (ACL) is a complex disease with a rich diversity of animal host species. This diversity imposes a challenge, since understanding ACL transmission requires the adequate identification of reservoir hosts, those species able to be a source of additional infections. In this study we present results from an ACL cross-sectional serological survey of 51 dogs (Canis familiaris), where we used diagnostic tests that measure dog's exposure toLeishmaniaspp. parasites. We did our research in Panamá, at a village that has undergone significant ecosystem level transformations. We found an ACL seroprevalence of 47% among dogs, and their exposure was positively associated with dog age and abundance of sand fly vectors in the houses of dog owners. Using mathematical models, which were fitted to data on the proportion of positive tests as function of dog age, we estimated a basic reproductive number (R0±s.e.) of 1·22 ± 0·09 that indicates the disease is endemically established in the dogs. Nevertheless, this information by itself is insufficient to incriminate dogs as ACL reservoirs, given the inability to find parasites (or their DNA) in seropositive dogs and previously reported failures to experimentally infect vectors feeding on dogs with ACL parasites.

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